Gene annotation
Transcriptome id Sobic.009G153800.1
Synonym NEK6, Sb09g021730, IBO1, ATNEK6
Functional annotation protein kinase, putative, expressed
UniProt A0A1B6P8N7
Pfam PF00069
Panther DB PTHR24362 PTHR24362:SF258
NCBI CDD KOG0589; Serine/threonine protein kinase
KEGG Orthology K08857; NIMA (never in mitosis gene a)-related kinase 1/4/5
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT3G44200 : NIMA (never in mitosis, gene A)-related 6
RAP-DB (Rice) LOC_Os05g36960.1 : protein kinase, putative, expressed
MaizeGDB (Corn) Zm00025a043794
Brachypodium PNT71170 , KQK10749 , KQK06032 , KQK06031
Barley HORVU1Hr1G074060.10 , HORVU1Hr1G074060.11 , HORVU1Hr1G074060.12 , HORVU1Hr1G074060.13 , HORVU1Hr1G074060.14 , HORVU1Hr1G074060.15 , HORVU1Hr1G074060.16 , HORVU1Hr1G074060.17 , HORVU1Hr1G074060.18 , HORVU1Hr1G074060.19 , HORVU1Hr1G074060.25 , HORVU1Hr1G074060.24 , HORVU1Hr1G074060.27 , HORVU1Hr1G074060.26 , HORVU1Hr1G074060.21 , HORVU1Hr1G074060.20 , HORVU1Hr1G074060.23 , HORVU1Hr1G074060.22 , HORVU1Hr1G074060.2 , HORVU1Hr1G074060.3 , HORVU1Hr1G074060.1 , HORVU1Hr1G074060.6 , HORVU1Hr1G074060.7 , HORVU1Hr1G074060.4 , HORVU1Hr1G074060.5 , HORVU1Hr1G074060.8 , HORVU1Hr1G074060.9
Wheat TraesCS1A02G275400 , TraesCS1D02G275000 , TraesCS1B02G284600 , TraesCS1B02G284600 , TraesCS3B02G408800 , TraesCS3B02G408800 , TraesCS3B02G408800
Populus -


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cDNA sequences
Sobic.009G153800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G059800 expressed protein -
2 Sobic.002G003200 peroxidase precursor, putative, expressed K00430: peroxidase
3 Sobic.004G344200 HEAT repeat family protein, putative, expressed K16578: CLIP-associating protein 1/2
4 Sobic.010G199700 STRUBBELIG-RECEPTOR FAMILY 7 precursor, putative, expressed -
5 Sobic.003G352800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@Protein L-ascorbate oxidase precursor (Os)(PubMedID : 27208977)@laccase precursor protein, putative, expressed K05909: laccase
6 Sobic.008G112200 Expressed in middle stem(PubMedID : 28649278)@myb-like DNA-binding domain containing protein, putative, expressed K09422: transcription factor MYB, plant
7 Sobic.002G164600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@microtubule-associated protein, putative, expressed -
8 Sobic.009G241600 Expressed in older stem(PubMedID : 28649278)@zinc finger C-x8-C-x5-C-x3-H type family protein, expressed K18753: butyrate response factor
9 Sobic.003G236701 - -
10 Sobic.009G226900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@auxin-responsive protein, putative, expressed -
11 Sobic.007G027200 anthocyanidin 3-O-glucosyltransferase, putative, expressed -
12 Sobic.007G223600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@methyladenine glycosylase, putative, expressed K01246: DNA-3-methyladenine glycosylase I
13 Sobic.009G162500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed K05280: flavonoid 3'-monooxygenase
14 Sobic.001G468300 methyladenine glycosylase, putative, expressed K01246: DNA-3-methyladenine glycosylase I
15 Sobic.002G205500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@CESA9 - cellulose synthase, expressed K10999: cellulose synthase A
16 Sobic.008G140800 expressed protein -
17 Sobic.009G048000 villin, putative, expressed K08017: advillin
18 Sobic.003G427900 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Cupin domain containing protein, expressed -
19 Sobic.006G226200 kinesin motor domain containing protein, putative, expressed K10405: kinesin family member C1
20 Sobic.003G296400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CESA4 - cellulose synthase, expressed K10999: cellulose synthase A


Gene co-expression network
sample Sobic009G153800 Sobic009G153800 Sobic008G059800 Sobic008G059800 Sobic009G153800--Sobic008G059800 Sobic002G003200 Sobic002G003200 Sobic009G153800--Sobic002G003200 Sobic004G344200 Sobic004G344200 Sobic009G153800--Sobic004G344200 Sobic010G199700 Sobic010G199700 Sobic009G153800--Sobic010G199700 Sobic003G352800 Sobic003G352800 Sobic009G153800--Sobic003G352800 Sobic008G112200 Sobic008G112200 Sobic009G153800--Sobic008G112200 Sobic002G164600 Sobic002G164600 Sobic009G153800--Sobic002G164600 Sobic009G241600 Sobic009G241600 Sobic009G153800--Sobic009G241600 Sobic003G236701 Sobic003G236701 Sobic009G153800--Sobic003G236701 Sobic008G059800--Sobic002G164600 Sobic008G059800--Sobic003G236701 Sobic008G059800--Sobic009G241600 Sobic008G059800--Sobic009G153800 Sobic008G059800--Sobic010G199700 Sobic007G223600 Sobic007G223600 Sobic008G059800--Sobic007G223600 Sobic008G059800--Sobic008G112200 Sobic009G226900 Sobic009G226900 Sobic008G059800--Sobic009G226900 Sobic006G066500 Sobic006G066500 Sobic008G059800--Sobic006G066500 Sobic002G003200--Sobic003G352800 Sobic002G003200--Sobic009G153800 Sobic002G003200--Sobic004G344200 Sobic001G405000 Sobic001G405000 Sobic002G003200--Sobic001G405000 Sobic002G003200--Sobic008G059800 Sobic006G001000 Sobic006G001000 Sobic002G003200--Sobic006G001000 Sobic009G162500 Sobic009G162500 Sobic002G003200--Sobic009G162500 Sobic001G066900 Sobic001G066900 Sobic002G003200--Sobic001G066900 Sobic008G163000 Sobic008G163000 Sobic002G003200--Sobic008G163000 Sobic004G344200--Sobic002G003200 Sobic004G344200--Sobic009G153800 Sobic004G344200--Sobic003G352800 Sobic004G344200--Sobic008G059800 Sobic004G344200--Sobic008G163000 Sobic004G344200--Sobic008G112200 Sobic004G344200--Sobic002G164600 Sobic004G344200--Sobic006G001000 Sobic004G344200--Sobic009G241600 Sobic010G199700--Sobic009G241600 Sobic010G199700--Sobic008G112200 Sobic007G027200 Sobic007G027200 Sobic010G199700--Sobic007G027200 Sobic010G199700--Sobic008G059800 Sobic003G153400 Sobic003G153400 Sobic010G199700--Sobic003G153400 Sobic001G468300 Sobic001G468300 Sobic010G199700--Sobic001G468300 Sobic010G199700--Sobic003G236701 Sobic006G166800 Sobic006G166800 Sobic010G199700--Sobic006G166800 Sobic010G199700--Sobic009G153800 Sobic003G352800--Sobic006G166800 Sobic009G162800 Sobic009G162800 Sobic003G352800--Sobic009G162800 Sobic003G352800--Sobic007G027200 Sobic003G352800--Sobic002G003200 Sobic003G352800--Sobic009G241600 Sobic003G352800--Sobic008G059800 Sobic003G352800--Sobic009G153800 Sobic003G427900 Sobic003G427900 Sobic003G352800--Sobic003G427900 Sobic010G196400 Sobic010G196400 Sobic003G352800--Sobic010G196400 Sobic008G112200--Sobic010G199700 Sobic008G112200--Sobic009G241600 Sobic008G112200--Sobic008G059800 Sobic008G112200--Sobic001G066900 Sobic008G112200--Sobic003G236701 Sobic008G112200--Sobic009G153800 Sobic008G112200--Sobic001G468300 Sobic008G112200--Sobic002G164600 Sobic008G112200--Sobic009G226900 Sobic002G164600--Sobic003G236701 Sobic002G164600--Sobic007G223600 Sobic002G164600--Sobic008G059800 Sobic006G226200 Sobic006G226200 Sobic002G164600--Sobic006G226200 Sobic003G112200 Sobic003G112200 Sobic002G164600--Sobic003G112200 Sobic002G164600--Sobic006G066500 Sobic006G209300 Sobic006G209300 Sobic002G164600--Sobic006G209300 Sobic002G164600--Sobic009G241600 Sobic005G229100 Sobic005G229100 Sobic002G164600--Sobic005G229100 Sobic009G241600--Sobic003G236701 Sobic009G241600--Sobic007G027200 Sobic009G241600--Sobic006G066500 Sobic009G241600--Sobic008G059800 Sobic009G241600--Sobic002G164600 Sobic009G241600--Sobic010G199700 Sobic009G241600--Sobic008G112200 Sobic009G241600--Sobic003G112200 Sobic009G241600--Sobic006G166800 Sobic003G236701--Sobic006G066500 Sobic003G236701--Sobic002G164600 Sobic003G236701--Sobic009G241600 Sobic003G236701--Sobic006G226200 Sobic003G236701--Sobic003G112200 Sobic003G236701--Sobic007G223600 Sobic003G236701--Sobic008G059800 Sobic003G231500 Sobic003G231500 Sobic003G236701--Sobic003G231500 Sobic001G238600 Sobic001G238600 Sobic003G236701--Sobic001G238600
Octagon: transcription factors


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