Gene annotation
Transcriptome id Sobic.002G003200.1
Synonym Sb02g000470
Functional annotation peroxidase precursor, putative, expressed
UniProt C5X744
Pfam PF00141
Panther DB PTHR31235
NCBI CDD -
KEGG Orthology K00430; peroxidase
Gene Ontology GO:0006979; response to oxidative stress GO:0004601peroxidase activity


Orthologs (automatic annotation)
TAIR AT3G01190 : Peroxidase superfamily protein
RAP-DB (Rice) LOC_Os07g01370.1 : peroxidase precursor, putative, expressed
MaizeGDB (Corn) Zm00025a055308 , Zm00025a050571 , Zm00025a050572 , Zm00025a034847 , Zm00025a042786 , Zm00025a036127 , Zm00025a018141 , Zm00025a044843 , Zm00025a018299 , Zm00025a024385
Brachypodium KQJ84998 , KQK07692 , KQK18502 , KQK18803 , KQK18804
Barley HORVU6Hr1G026230.5 , HORVU6Hr1G026230.4 , HORVU6Hr1G026230.1 , HORVU6Hr1G075510.2 , HORVU6Hr1G075510.1 , HORVU7Hr1G045600.1 , HORVU7Hr1G039560.1 , HORVU7Hr1G039580.1 , HORVU7Hr1G039570.6 , HORVU5Hr1G012920.1 , HORVU7Hr1G039590.1 , HORVU1Hr1G016840.4 , HORVU1Hr1G016840.5 , HORVU1Hr1G016840.1 , HORVU1Hr1G016840.2 , HORVU1Hr1G016840.3 , HORVU1Hr1G016770.1
Wheat TraesCS7D02G195100 , TraesCS7B02G099600 , TraesCS1B02G096200 , TraesCS1A02G078200 , TraesCS1B02G365300 , TraesCS6B02G333800 , TraesCS7A02G193900 , TraesCS2D02G511200 , TraesCS7B02G099200 , TraesCS2A02G037700 , TraesCS1D02G080300 , TraesCS6B02G164400 , TraesCS6B02G164400 , TraesCS2B02G537700 , TraesCS5A02G516300 , TraesCS7D02G195000 , TraesCS4B02G347700 , TraesCS2D02G509700 , TraesCS7B02G099100 , TraesCS7D02G195500 , TraesCS7A02G194200 , TraesCS2A02G509800 , TraesCS7D02G223900 , TraesCS7D02G195200 , TraesCS1A02G078100 , TraesCS6A02G136500 , TraesCS6D02G284700 , TraesCS7D02G195400 , TraesCS7A02G193800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G352800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@Protein L-ascorbate oxidase precursor (Os)(PubMedID : 27208977)@laccase precursor protein, putative, expressed K05909: laccase
2 Sobic.009G153800 protein kinase, putative, expressed K08857: NIMA (never in mitosis gene a)-related kinase 1/4/5
3 Sobic.004G344200 HEAT repeat family protein, putative, expressed K16578: CLIP-associating protein 1/2
4 Sobic.001G405000 MRH1, putative, expressed -
5 Sobic.008G059800 expressed protein -
6 Sobic.006G001000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@cytochrome P450 93A2, putative, expressed -
7 Sobic.009G162500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed K05280: flavonoid 3'-monooxygenase
8 Sobic.001G066900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@OsMan06 - Endo-Beta-Mannanase, expressed K19355: mannan endo-1,4-beta-mannosidase
9 Sobic.008G163000 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR57 - Auxin-responsive SAUR gene family member, expressed -
10 Sobic.003G062000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@fasciclin domain containing protein, expressed -
11 Sobic.009G226900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@auxin-responsive protein, putative, expressed -
12 Sobic.008G112200 Expressed in middle stem(PubMedID : 28649278)@myb-like DNA-binding domain containing protein, putative, expressed K09422: transcription factor MYB, plant
13 Sobic.010G086800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@plastocyanin-like domain containing protein, putative, expressed -
14 Sobic.004G243400 copper methylamine oxidase precursor, putative, expressed K00276: AOC3, AOC2, primary-amine oxidase
15 Sobic.005G087400 alpha-N-arabinofuranosidase A, putative, expressed K01209: alpha-L-arabinofuranosidase
16 Sobic.010G199700 STRUBBELIG-RECEPTOR FAMILY 7 precursor, putative, expressed -
17 Sobic.004G168700 harpin-induced protein 1 domain containing protein, expressed -
18 Sobic.003G427900 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Cupin domain containing protein, expressed -
19 Sobic.009G196200 myosin heavy chain-related, putative, expressed -
20 Sobic.010G196400 expressed protein -


Gene co-expression network
sample Sobic002G003200 Sobic002G003200 Sobic003G352800 Sobic003G352800 Sobic002G003200--Sobic003G352800 Sobic009G153800 Sobic009G153800 Sobic002G003200--Sobic009G153800 Sobic004G344200 Sobic004G344200 Sobic002G003200--Sobic004G344200 Sobic001G405000 Sobic001G405000 Sobic002G003200--Sobic001G405000 Sobic008G059800 Sobic008G059800 Sobic002G003200--Sobic008G059800 Sobic006G001000 Sobic006G001000 Sobic002G003200--Sobic006G001000 Sobic009G162500 Sobic009G162500 Sobic002G003200--Sobic009G162500 Sobic001G066900 Sobic001G066900 Sobic002G003200--Sobic001G066900 Sobic008G163000 Sobic008G163000 Sobic002G003200--Sobic008G163000 Sobic006G166800 Sobic006G166800 Sobic003G352800--Sobic006G166800 Sobic009G162800 Sobic009G162800 Sobic003G352800--Sobic009G162800 Sobic007G027200 Sobic007G027200 Sobic003G352800--Sobic007G027200 Sobic003G352800--Sobic002G003200 Sobic009G241600 Sobic009G241600 Sobic003G352800--Sobic009G241600 Sobic003G352800--Sobic008G059800 Sobic003G352800--Sobic009G153800 Sobic003G427900 Sobic003G427900 Sobic003G352800--Sobic003G427900 Sobic010G196400 Sobic010G196400 Sobic003G352800--Sobic010G196400 Sobic009G153800--Sobic008G059800 Sobic009G153800--Sobic002G003200 Sobic009G153800--Sobic004G344200 Sobic010G199700 Sobic010G199700 Sobic009G153800--Sobic010G199700 Sobic009G153800--Sobic003G352800 Sobic008G112200 Sobic008G112200 Sobic009G153800--Sobic008G112200 Sobic002G164600 Sobic002G164600 Sobic009G153800--Sobic002G164600 Sobic009G153800--Sobic009G241600 Sobic003G236701 Sobic003G236701 Sobic009G153800--Sobic003G236701 Sobic004G344200--Sobic002G003200 Sobic004G344200--Sobic009G153800 Sobic004G344200--Sobic003G352800 Sobic004G344200--Sobic008G059800 Sobic004G344200--Sobic008G163000 Sobic004G344200--Sobic008G112200 Sobic004G344200--Sobic002G164600 Sobic004G344200--Sobic006G001000 Sobic004G344200--Sobic009G241600 Sobic009G055900 Sobic009G055900 Sobic001G405000--Sobic009G055900 Sobic001G405000--Sobic002G003200 Sobic004G243400 Sobic004G243400 Sobic001G405000--Sobic004G243400 Sobic003G071400 Sobic003G071400 Sobic001G405000--Sobic003G071400 Sobic001G405000--Sobic008G163000 Sobic001G275600 Sobic001G275600 Sobic001G405000--Sobic001G275600 Sobic002G201100 Sobic002G201100 Sobic001G405000--Sobic002G201100 Sobic002G377300 Sobic002G377300 Sobic001G405000--Sobic002G377300 Sobic004G168700 Sobic004G168700 Sobic001G405000--Sobic004G168700 Sobic008G059800--Sobic002G164600 Sobic008G059800--Sobic003G236701 Sobic008G059800--Sobic009G241600 Sobic008G059800--Sobic009G153800 Sobic008G059800--Sobic010G199700 Sobic007G223600 Sobic007G223600 Sobic008G059800--Sobic007G223600 Sobic008G059800--Sobic008G112200 Sobic009G226900 Sobic009G226900 Sobic008G059800--Sobic009G226900 Sobic006G066500 Sobic006G066500 Sobic008G059800--Sobic006G066500 Sobic006G001000--Sobic001G275600 Sobic006G001000--Sobic008G163000 Sobic009G151000 Sobic009G151000 Sobic006G001000--Sobic009G151000 Sobic006G001000--Sobic002G003200 Sobic006G001000--Sobic003G352800 Sobic003G108000 Sobic003G108000 Sobic006G001000--Sobic003G108000 Sobic009G215600 Sobic009G215600 Sobic006G001000--Sobic009G215600 Sobic006G001000--Sobic004G344200 Sobic006G001000--Sobic003G427900 Sobic003G296400 Sobic003G296400 Sobic009G162500--Sobic003G296400 Sobic002G205500 Sobic002G205500 Sobic009G162500--Sobic002G205500 Sobic003G062000 Sobic003G062000 Sobic009G162500--Sobic003G062000 Sobic003G151300 Sobic003G151300 Sobic009G162500--Sobic003G151300 Sobic009G162500--Sobic002G003200 Sobic003G366300 Sobic003G366300 Sobic009G162500--Sobic003G366300 Sobic001G535400 Sobic001G535400 Sobic009G162500--Sobic001G535400 Sobic009G162500--Sobic009G153800 Sobic009G032600 Sobic009G032600 Sobic009G162500--Sobic009G032600 Sobic001G066900--Sobic010G196400 Sobic001G265900 Sobic001G265900 Sobic001G066900--Sobic001G265900 Sobic005G146300 Sobic005G146300 Sobic001G066900--Sobic005G146300 Sobic001G066900--Sobic008G112200 Sobic009G031400 Sobic009G031400 Sobic001G066900--Sobic009G031400 Sobic001G250200 Sobic001G250200 Sobic001G066900--Sobic001G250200 Sobic001G066900--Sobic010G199700 Sobic001G066900--Sobic002G003200 Sobic001G066900--Sobic003G352800 Sobic008G163000--Sobic001G275600 Sobic008G163000--Sobic006G001000 Sobic009G119400 Sobic009G119400 Sobic008G163000--Sobic009G119400 Sobic008G163000--Sobic004G344200 Sobic008G164900 Sobic008G164900 Sobic008G163000--Sobic008G164900 Sobic008G163000--Sobic009G151000 Sobic008G163000--Sobic010G196400 Sobic008G163000--Sobic002G003200 Sobic008G163000--Sobic003G108000
Octagon: transcription factors


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