Gene annotation
Transcriptome id Sobic.010G196400.1
Synonym Sb10g024570
Functional annotation expressed protein
UniProt A0A194YKB8
Pfam PF13704
Panther DB PTHR21461 PTHR21461:SF11
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G33570 : Domain of unknown function (DUF23)
RAP-DB (Rice) LOC_Os06g41910.1 : expressed protein
MaizeGDB (Corn) Zm00025a051498 , Zm00025a021790
Brachypodium KQK00998 , KQK17618 , KQK17619 , KQK00997 , KQK17620 , PNT75625 , KQK18454
Barley HORVU1Hr1G016710.18 , HORVU1Hr1G016710.16 , HORVU1Hr1G016710.17 , HORVU1Hr1G016710.14 , HORVU1Hr1G016710.15 , HORVU1Hr1G016710.12 , HORVU1Hr1G016710.13 , HORVU0Hr1G020270.3 , HORVU0Hr1G020270.2 , HORVU0Hr1G020270.1 , HORVU0Hr1G020270.5 , HORVU0Hr1G020270.4 , HORVU1Hr1G016710.21 , HORVU1Hr1G016710.4 , HORVU1Hr1G016710.5 , HORVU1Hr1G016710.3 , HORVU7Hr1G093190.7 , HORVU7Hr1G093190.6 , HORVU7Hr1G093190.5 , HORVU7Hr1G093190.4 , HORVU7Hr1G093190.3 , HORVU7Hr1G093190.2 , HORVU7Hr1G093190.1 , HORVU6Hr1G069940.1 , HORVU6Hr1G069940.2 , HORVU6Hr1G069940.3 , HORVU6Hr1G069940.4 , HORVU7Hr1G093190.8
Wheat TraesCS6D02G258100 , TraesCS7D02G390400 , TraesCS6A02G277500 , TraesCS7A02G394900 , TraesCS7B02G296900 , TraesCS6B02G305500
Populus -


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cDNA sequences
Sobic.010G196400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G162800 laccase precursor protein, putative, expressed K05909: laccase
2 Sobic.001G066900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@OsMan06 - Endo-Beta-Mannanase, expressed K19355: mannan endo-1,4-beta-mannosidase
3 Sobic.001G265900 "similar to Proline-rich protein precursor, structural protein of cell walls in plants"(PubMedID : 24655390)@similar to Proline-rich protein precursor(PubMedID : 24655390)@POEI13 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
4 Sobic.006G166800 plastocyanin-like domain containing protein, putative, expressed -
5 Sobic.001G307300 short chain dehydrogenase/reductase protein, putative, expressed -
6 Sobic.003G153400 GDSL-like lipase/acylhydrolase, putative, expressed -
7 Sobic.001G275600 peptide transporter PTR2, putative, expressed -
8 Sobic.009G151000 Subtilase family protein("PubMedID : 26759170,PubMedID : 24597475")@OsSub47 - Putative Subtilisin homologue, expressed -
9 Sobic.001G250200 glycerol-3-phosphate acyltransferase, putative, expressed -
10 Sobic.003G352800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@Protein L-ascorbate oxidase precursor (Os)(PubMedID : 27208977)@laccase precursor protein, putative, expressed K05909: laccase
11 Sobic.003G085200 expressed protein -
12 Sobic.007G027200 anthocyanidin 3-O-glucosyltransferase, putative, expressed -
13 Sobic.003G108000 expressed protein -
14 Sobic.008G173200 ZOS12-10 - C2H2 zinc finger protein, expressed -
15 Sobic.008G163000 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR57 - Auxin-responsive SAUR gene family member, expressed -
16 Sobic.009G031400 AMP-binding enzyme, putative, expressed K01897: ACSL, long-chain acyl-CoA synthetase
17 Sobic.003G430000 eukaryotic aspartyl protease domain containing protein, expressed -
18 Sobic.007G107950 - -
19 Sobic.005G146300 Ser/Thr protein phosphatase family protein, putative, expressed K14379: tartrate-resistant acid phosphatase type 5
20 Sobic.001G510200 estradiol 17-beta-dehydrogenase 12, putative, expressed K10251: HSD17B12, KAR, 17beta-estradiol 17-dehydrogenase / very-long-chain 3-oxoacyl-CoA reductase


Gene co-expression network
sample Sobic010G196400 Sobic010G196400 Sobic009G162800 Sobic009G162800 Sobic010G196400--Sobic009G162800 Sobic001G066900 Sobic001G066900 Sobic010G196400--Sobic001G066900 Sobic001G265900 Sobic001G265900 Sobic010G196400--Sobic001G265900 Sobic006G166800 Sobic006G166800 Sobic010G196400--Sobic006G166800 Sobic001G307300 Sobic001G307300 Sobic010G196400--Sobic001G307300 Sobic003G153400 Sobic003G153400 Sobic010G196400--Sobic003G153400 Sobic001G275600 Sobic001G275600 Sobic010G196400--Sobic001G275600 Sobic009G151000 Sobic009G151000 Sobic010G196400--Sobic009G151000 Sobic001G250200 Sobic001G250200 Sobic010G196400--Sobic001G250200 Sobic009G162800--Sobic006G166800 Sobic003G352800 Sobic003G352800 Sobic009G162800--Sobic003G352800 Sobic009G162800--Sobic010G196400 Sobic007G027200 Sobic007G027200 Sobic009G162800--Sobic007G027200 Sobic001G510200 Sobic001G510200 Sobic009G162800--Sobic001G510200 Sobic009G162800--Sobic003G153400 Sobic002G394700 Sobic002G394700 Sobic009G162800--Sobic002G394700 Sobic003G276200 Sobic003G276200 Sobic009G162800--Sobic003G276200 Sobic009G241600 Sobic009G241600 Sobic009G162800--Sobic009G241600 Sobic001G066900--Sobic010G196400 Sobic001G066900--Sobic001G265900 Sobic005G146300 Sobic005G146300 Sobic001G066900--Sobic005G146300 Sobic008G112200 Sobic008G112200 Sobic001G066900--Sobic008G112200 Sobic009G031400 Sobic009G031400 Sobic001G066900--Sobic009G031400 Sobic001G066900--Sobic001G250200 Sobic010G199700 Sobic010G199700 Sobic001G066900--Sobic010G199700 Sobic002G003200 Sobic002G003200 Sobic001G066900--Sobic002G003200 Sobic001G066900--Sobic003G352800 Sobic005G147800 Sobic005G147800 Sobic001G265900--Sobic005G147800 Sobic001G265900--Sobic010G196400 Sobic001G265900--Sobic001G250200 Sobic001G265900--Sobic001G066900 Sobic007G142300 Sobic007G142300 Sobic001G265900--Sobic007G142300 Sobic002G397400 Sobic002G397400 Sobic001G265900--Sobic002G397400 Sobic010G107200 Sobic010G107200 Sobic001G265900--Sobic010G107200 Sobic001G265900--Sobic001G307300 Sobic008G082400 Sobic008G082400 Sobic001G265900--Sobic008G082400 Sobic006G166800--Sobic007G027200 Sobic006G166800--Sobic009G162800 Sobic006G166800--Sobic001G510200 Sobic006G166800--Sobic003G352800 Sobic006G166800--Sobic003G153400 Sobic006G166800--Sobic002G394700 Sobic006G166800--Sobic010G196400 Sobic007G043800 Sobic007G043800 Sobic006G166800--Sobic007G043800 Sobic006G166800--Sobic009G241600 Sobic009G119400 Sobic009G119400 Sobic001G307300--Sobic009G119400 Sobic001G336800 Sobic001G336800 Sobic001G307300--Sobic001G336800 Sobic001G307300--Sobic010G196400 Sobic001G307300--Sobic001G275600 Sobic009G215600 Sobic009G215600 Sobic001G307300--Sobic009G215600 Sobic001G307300--Sobic002G397400 Sobic002G351000 Sobic002G351000 Sobic001G307300--Sobic002G351000 Sobic001G307300--Sobic009G151000 Sobic001G307300--Sobic001G265900 Sobic003G153400--Sobic006G166800 Sobic003G153400--Sobic007G027200 Sobic008G173200 Sobic008G173200 Sobic003G153400--Sobic008G173200 Sobic003G153400--Sobic010G199700 Sobic003G153400--Sobic009G151000 Sobic003G153400--Sobic010G196400 Sobic003G153400--Sobic009G162800 Sobic003G153400--Sobic007G043800 Sobic010G112800 Sobic010G112800 Sobic003G153400--Sobic010G112800 Sobic001G275600--Sobic009G151000 Sobic008G163000 Sobic008G163000 Sobic001G275600--Sobic008G163000 Sobic001G275600--Sobic009G215600 Sobic001G275600--Sobic001G307300 Sobic006G001000 Sobic006G001000 Sobic001G275600--Sobic006G001000 Sobic001G275600--Sobic009G119400 Sobic001G275600--Sobic008G173200 Sobic001G275600--Sobic010G196400 Sobic002G141100 Sobic002G141100 Sobic001G275600--Sobic002G141100 Sobic009G151000--Sobic001G275600 Sobic009G151000--Sobic008G173200 Sobic009G151000--Sobic003G153400 Sobic009G151000--Sobic010G196400 Sobic003G108000 Sobic003G108000 Sobic009G151000--Sobic003G108000 Sobic009G151000--Sobic001G307300 Sobic009G151000--Sobic006G001000 Sobic009G151000--Sobic001G336800 Sobic009G070600 Sobic009G070600 Sobic009G151000--Sobic009G070600 Sobic001G250200--Sobic001G265900 Sobic001G250200--Sobic010G196400 Sobic001G250200--Sobic005G147800 Sobic001G250200--Sobic001G066900 Sobic007G107950 Sobic007G107950 Sobic001G250200--Sobic007G107950 Sobic001G250200--Sobic010G107200 Sobic003G085200 Sobic003G085200 Sobic001G250200--Sobic003G085200 Sobic001G250200--Sobic007G142300 Sobic001G221200 Sobic001G221200 Sobic001G250200--Sobic001G221200
Octagon: transcription factors


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