Gene annotation
Transcriptome id Sobic.006G001000.1
Synonym CYP93D1, Sb06g000260
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence (PubMedID : 27586543)
cytochrome P450 93A2, putative, expressed
UniProt C5YB78
Pfam PF00067
Panther DB PTHR24298:SF137 PTHR24298
NCBI CDD KOG0156; Cytochrome P450 CYP2 subfamily
KEGG Orthology -
Gene Ontology GO:0005506; iron ion binding GO:0016705oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen


Orthologs (automatic annotation)
TAIR AT5G06900 : cytochrome P450, family 93, subfamily D, polypeptide 1
RAP-DB (Rice) LOC_Os04g01140.1 : cytochrome P450 93A2, putative, expressed
MaizeGDB (Corn) Zm00025a055532 , Zm00025a019974 , Zm00025a005704 , Zm00025a052335 , Zm00025a055529 , Zm00025a009029 , Zm00025a012176
Brachypodium KQJ90462 , KQK17670 , KQJ93709
Barley HORVU7Hr1G083670.3 , HORVU7Hr1G083670.2 , HORVU7Hr1G083670.6 , HORVU7Hr1G083670.4 , HORVU7Hr1G115500.1 , HORVU7Hr1G115500.3 , HORVU7Hr1G115500.2 , HORVU7Hr1G115500.5 , HORVU7Hr1G115500.4 , HORVU7Hr1G115500.6
Wheat TraesCS2B02G057100 , TraesCS7B02G434200 , TraesCS7B02G434200 , TraesCS7B02G434200 , TraesCS2A02G044900 , TraesCS7D02G347600 , TraesCS7A02G339900 , TraesCS2D02G043500 , TraesCS2D02G043500 , TraesCS2D02G043500 , TraesCS2D02G043500 , TraesCS7D02G508000 , TraesCS7A02G518100 , TraesCS7B02G251600
Populus -


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cDNA sequences
Sobic.006G001000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G275600 peptide transporter PTR2, putative, expressed -
2 Sobic.008G163000 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR57 - Auxin-responsive SAUR gene family member, expressed -
3 Sobic.009G151000 Subtilase family protein("PubMedID : 26759170,PubMedID : 24597475")@OsSub47 - Putative Subtilisin homologue, expressed -
4 Sobic.002G003200 peroxidase precursor, putative, expressed K00430: peroxidase
5 Sobic.003G352800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@Protein L-ascorbate oxidase precursor (Os)(PubMedID : 27208977)@laccase precursor protein, putative, expressed K05909: laccase
6 Sobic.003G108000 expressed protein -
7 Sobic.009G215600 expressed protein -
8 Sobic.004G344200 HEAT repeat family protein, putative, expressed K16578: CLIP-associating protein 1/2
9 Sobic.003G427900 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Cupin domain containing protein, expressed -
10 Sobic.001G307300 short chain dehydrogenase/reductase protein, putative, expressed -
11 Sobic.009G119400 expressed high in CK60 (an inefficient nitrogen user)(PubMedID : 28697783)@glycosyl hydrolases family 17, putative, expressed -
12 Sobic.010G196400 expressed protein -
13 Sobic.008G173200 ZOS12-10 - C2H2 zinc finger protein, expressed -
14 Sobic.009G162500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed K05280: flavonoid 3'-monooxygenase
15 Sobic.004G168700 harpin-induced protein 1 domain containing protein, expressed -
16 Sobic.001G405000 MRH1, putative, expressed -
17 Sobic.004G300800 aldehyde dehydrogenase, putative, expressed K00128: aldehyde dehydrogenase (NAD+)
18 Sobic.010G086800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@plastocyanin-like domain containing protein, putative, expressed -
19 Sobic.006G166800 plastocyanin-like domain containing protein, putative, expressed -
20 Sobic.001G534532 - -


Gene co-expression network
sample Sobic006G001000 Sobic006G001000 Sobic001G275600 Sobic001G275600 Sobic006G001000--Sobic001G275600 Sobic008G163000 Sobic008G163000 Sobic006G001000--Sobic008G163000 Sobic009G151000 Sobic009G151000 Sobic006G001000--Sobic009G151000 Sobic002G003200 Sobic002G003200 Sobic006G001000--Sobic002G003200 Sobic003G352800 Sobic003G352800 Sobic006G001000--Sobic003G352800 Sobic003G108000 Sobic003G108000 Sobic006G001000--Sobic003G108000 Sobic009G215600 Sobic009G215600 Sobic006G001000--Sobic009G215600 Sobic004G344200 Sobic004G344200 Sobic006G001000--Sobic004G344200 Sobic003G427900 Sobic003G427900 Sobic006G001000--Sobic003G427900 Sobic001G275600--Sobic009G151000 Sobic001G275600--Sobic008G163000 Sobic001G275600--Sobic009G215600 Sobic001G307300 Sobic001G307300 Sobic001G275600--Sobic001G307300 Sobic001G275600--Sobic006G001000 Sobic009G119400 Sobic009G119400 Sobic001G275600--Sobic009G119400 Sobic008G173200 Sobic008G173200 Sobic001G275600--Sobic008G173200 Sobic010G196400 Sobic010G196400 Sobic001G275600--Sobic010G196400 Sobic002G141100 Sobic002G141100 Sobic001G275600--Sobic002G141100 Sobic008G163000--Sobic001G275600 Sobic008G163000--Sobic006G001000 Sobic008G163000--Sobic009G119400 Sobic008G163000--Sobic004G344200 Sobic008G164900 Sobic008G164900 Sobic008G163000--Sobic008G164900 Sobic008G163000--Sobic009G151000 Sobic008G163000--Sobic010G196400 Sobic008G163000--Sobic002G003200 Sobic008G163000--Sobic003G108000 Sobic009G151000--Sobic001G275600 Sobic009G151000--Sobic008G173200 Sobic003G153400 Sobic003G153400 Sobic009G151000--Sobic003G153400 Sobic009G151000--Sobic010G196400 Sobic009G151000--Sobic003G108000 Sobic009G151000--Sobic001G307300 Sobic009G151000--Sobic006G001000 Sobic001G336800 Sobic001G336800 Sobic009G151000--Sobic001G336800 Sobic009G070600 Sobic009G070600 Sobic009G151000--Sobic009G070600 Sobic002G003200--Sobic003G352800 Sobic009G153800 Sobic009G153800 Sobic002G003200--Sobic009G153800 Sobic002G003200--Sobic004G344200 Sobic001G405000 Sobic001G405000 Sobic002G003200--Sobic001G405000 Sobic008G059800 Sobic008G059800 Sobic002G003200--Sobic008G059800 Sobic002G003200--Sobic006G001000 Sobic009G162500 Sobic009G162500 Sobic002G003200--Sobic009G162500 Sobic001G066900 Sobic001G066900 Sobic002G003200--Sobic001G066900 Sobic002G003200--Sobic008G163000 Sobic006G166800 Sobic006G166800 Sobic003G352800--Sobic006G166800 Sobic009G162800 Sobic009G162800 Sobic003G352800--Sobic009G162800 Sobic007G027200 Sobic007G027200 Sobic003G352800--Sobic007G027200 Sobic003G352800--Sobic002G003200 Sobic009G241600 Sobic009G241600 Sobic003G352800--Sobic009G241600 Sobic003G352800--Sobic008G059800 Sobic003G352800--Sobic009G153800 Sobic003G352800--Sobic003G427900 Sobic003G352800--Sobic010G196400 Sobic003G108000--Sobic009G151000 Sobic003G108000--Sobic010G196400 Sobic003G108000--Sobic009G119400 Sobic003G108000--Sobic001G275600 Sobic003G108000--Sobic008G163000 Sobic004G168700 Sobic004G168700 Sobic003G108000--Sobic004G168700 Sobic003G108000--Sobic006G001000 Sobic003G108000--Sobic001G307300 Sobic003G085200 Sobic003G085200 Sobic003G108000--Sobic003G085200 Sobic009G215600--Sobic002G141100 Sobic008G163200 Sobic008G163200 Sobic009G215600--Sobic008G163200 Sobic004G038300 Sobic004G038300 Sobic009G215600--Sobic004G038300 Sobic002G209800 Sobic002G209800 Sobic009G215600--Sobic002G209800 Sobic002G416950 Sobic002G416950 Sobic009G215600--Sobic002G416950 Sobic004G300800 Sobic004G300800 Sobic009G215600--Sobic004G300800 Sobic004G060700 Sobic004G060700 Sobic009G215600--Sobic004G060700 Sobic001G379300 Sobic001G379300 Sobic009G215600--Sobic001G379300 Sobic002G415300 Sobic002G415300 Sobic009G215600--Sobic002G415300 Sobic004G344200--Sobic002G003200 Sobic004G344200--Sobic009G153800 Sobic004G344200--Sobic003G352800 Sobic004G344200--Sobic008G059800 Sobic004G344200--Sobic008G163000 Sobic008G112200 Sobic008G112200 Sobic004G344200--Sobic008G112200 Sobic002G164600 Sobic002G164600 Sobic004G344200--Sobic002G164600 Sobic004G344200--Sobic006G001000 Sobic004G344200--Sobic009G241600 Sobic003G427900--Sobic003G352800 Sobic010G086800 Sobic010G086800 Sobic003G427900--Sobic010G086800 Sobic003G296400 Sobic003G296400 Sobic003G427900--Sobic003G296400 Sobic006G066500 Sobic006G066500 Sobic003G427900--Sobic006G066500 Sobic009G226900 Sobic009G226900 Sobic003G427900--Sobic009G226900 Sobic001G468300 Sobic001G468300 Sobic003G427900--Sobic001G468300 Sobic006G036400 Sobic006G036400 Sobic003G427900--Sobic006G036400 Sobic003G386200 Sobic003G386200 Sobic003G427900--Sobic003G386200 Sobic003G062000 Sobic003G062000 Sobic003G427900--Sobic003G062000
Octagon: transcription factors


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