Gene annotation
Transcriptome id Sobic.005G087400.2,Sobic.005G087400.5,Sobic.005G087400.3,Sobic.005G087400.1,Sobic.005G087400.6,Sobic.005G087400.4
Synonym ATASD1, ARAF1, ASD1, Sb05g007100, ARAF
Functional annotation alpha-N-arabinofuranosidase A, putative, expressed
UniProt A0A1Z5RHD0 , A0A1Z5RHF6 , A0A1Z5RI12 , A0A1B6PR17 , A0A1B6PR20 , A0A1Z5RHT8
Pfam PF06964
Panther DB PTHR31776 PTHR31776:SF0
NCBI CDD -
KEGG Orthology K01209; alpha-L-arabinofuranosidase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G10740 : alpha-L-arabinofuranosidase 1
RAP-DB (Rice) LOC_Os11g03730.1,LOC_Os11g03730.3,LOC_Os11g03730.2 : alpha-N-arabinofuranosidase A, putative, expressed
MaizeGDB (Corn) Zm00025a028968 , Zm00025a033391 , Zm00025a029540
Brachypodium KQJ92445 , KQJ92444 , PNT77043
Barley HORVU4Hr1G026150.14 , HORVU4Hr1G026150.27 , HORVU4Hr1G026150.26 , HORVU4Hr1G026150.25 , HORVU4Hr1G026150.23 , HORVU4Hr1G026150.22 , HORVU4Hr1G026150.21 , HORVU4Hr1G026150.20 , HORVU4Hr1G026150.29 , HORVU4Hr1G026150.28 , HORVU4Hr1G026150.30 , HORVU5Hr1G045150.7 , HORVU5Hr1G045150.8 , HORVU5Hr1G045150.9 , HORVU5Hr1G045150.6 , HORVU4Hr1G026150.18 , HORVU4Hr1G026150.19 , HORVU4Hr1G026150.16 , HORVU4Hr1G026150.17 , HORVU5Hr1G045150.4 , HORVU4Hr1G026150.15 , HORVU5Hr1G045150.2 , HORVU5Hr1G045150.3 , HORVU4Hr1G026150.10 , HORVU5Hr1G045150.1 , HORVU4Hr1G026150.12 , HORVU4Hr1G026150.13 , HORVU4Hr1G026150.11 , HORVU5Hr1G045150.14 , HORVU5Hr1G045150.15 , HORVU5Hr1G045150.16 , HORVU5Hr1G045150.10 , HORVU5Hr1G045150.11 , HORVU5Hr1G045150.12 , HORVU5Hr1G045150.13 , HORVU4Hr1G026150.8 , HORVU4Hr1G026150.9 , HORVU4Hr1G026150.4 , HORVU4Hr1G026150.5 , HORVU4Hr1G026150.6 , HORVU4Hr1G026150.1 , HORVU4Hr1G026150.2 , HORVU4Hr1G026150.3
Wheat TraesCS4A02G188300 , TraesCS4A02G188300 , TraesCS4A02G188300 , TraesCS4D02G125100 , TraesCS4D02G125100 , TraesCS4D02G125100 , TraesCS4D02G127100 , TraesCS4D02G127100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G140800 helix-loop-helix DNA-binding protein, putative, expressed -
2 Sobic.004G150800 expressed protein -
3 Sobic.006G096500 glutamate decarboxylase, putative, expressed K01580: E4.1.1.15, gadB, gadA, glutamate decarboxylase
4 Sobic.001G388000 GTPase-activating protein, putative, expressed -
5 Sobic.001G129600 nucleobase-ascorbate transporter, putative, expressed K14611: SLC23A1, solute carrier family 23 (nucleobase transporter), member 1
6 Sobic.003G272900 - -
7 Sobic.005G145100 phospholipase A2, putative, expressed -
8 Sobic.005G110600 glycosyl hydrolase, putative, expressed K01183: chitinase
9 Sobic.003G006100 Leucine Rich Repeat family protein, expressed -
10 Sobic.003G062000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@fasciclin domain containing protein, expressed -
11 Sobic.003G366300 protein kinase domain containing protein, expressed K08857: NIMA (never in mitosis gene a)-related kinase 1/4/5
12 Sobic.010G133932 - -
13 Sobic.005G130600 expressed protein -
14 Sobic.002G028500 app1, putative, expressed -
15 Sobic.004G290300 anthranilate phosphoribosyltransferase, putative, expressed -
16 Sobic.001G208600 receptor kinase like protein, putative, expressed -
17 Sobic.010G096100 ras-related protein, putative, expressed K04392: Ras-related C3 botulinum toxin substrate 1
18 Sobic.001G037400 expressed protein -
19 Sobic.002G003200 peroxidase precursor, putative, expressed K00430: peroxidase
20 Sobic.009G032600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@peroxidase precursor, putative, expressed K00430: peroxidase


Gene co-expression network
sample Sobic005G087400 Sobic005G087400 Sobic001G140800 Sobic001G140800 Sobic005G087400--Sobic001G140800 Sobic004G150800 Sobic004G150800 Sobic005G087400--Sobic004G150800 Sobic006G096500 Sobic006G096500 Sobic005G087400--Sobic006G096500 Sobic001G388000 Sobic001G388000 Sobic005G087400--Sobic001G388000 Sobic001G129600 Sobic001G129600 Sobic005G087400--Sobic001G129600 Sobic003G272900 Sobic003G272900 Sobic005G087400--Sobic003G272900 Sobic005G145100 Sobic005G145100 Sobic005G087400--Sobic005G145100 Sobic005G110600 Sobic005G110600 Sobic005G087400--Sobic005G110600 Sobic003G006100 Sobic003G006100 Sobic005G087400--Sobic003G006100 Sobic001G140800--Sobic005G110600 Sobic001G140800--Sobic001G388000 Sobic001G140800--Sobic005G145100 Sobic010G133932 Sobic010G133932 Sobic001G140800--Sobic010G133932 Sobic001G140800--Sobic005G087400 Sobic001G140800--Sobic001G129600 Sobic005G130700 Sobic005G130700 Sobic001G140800--Sobic005G130700 Sobic001G484000 Sobic001G484000 Sobic001G140800--Sobic001G484000 Sobic006G062300 Sobic006G062300 Sobic001G140800--Sobic006G062300 Sobic004G150800--Sobic006G096500 Sobic004G150800--Sobic005G087400 Sobic004G150800--Sobic003G006100 Sobic001G037400 Sobic001G037400 Sobic004G150800--Sobic001G037400 Sobic004G150800--Sobic005G110600 Sobic004G150800--Sobic001G140800 Sobic004G297950 Sobic004G297950 Sobic004G150800--Sobic004G297950 Sobic005G130600 Sobic005G130600 Sobic004G150800--Sobic005G130600 Sobic003G419600 Sobic003G419600 Sobic004G150800--Sobic003G419600 Sobic006G096500--Sobic004G150800 Sobic006G096500--Sobic005G087400 Sobic010G096100 Sobic010G096100 Sobic006G096500--Sobic010G096100 Sobic003G269100 Sobic003G269100 Sobic006G096500--Sobic003G269100 Sobic006G096500--Sobic001G140800 Sobic006G096500--Sobic003G006100 Sobic006G096500--Sobic005G130600 Sobic008G057100 Sobic008G057100 Sobic006G096500--Sobic008G057100 Sobic001G208600 Sobic001G208600 Sobic006G096500--Sobic001G208600 Sobic001G388000--Sobic010G133932 Sobic001G388000--Sobic001G140800 Sobic001G388000--Sobic005G145100 Sobic005G112000 Sobic005G112000 Sobic001G388000--Sobic005G112000 Sobic003G366300 Sobic003G366300 Sobic001G388000--Sobic003G366300 Sobic001G388000--Sobic005G110600 Sobic004G290300 Sobic004G290300 Sobic001G388000--Sobic004G290300 Sobic003G239100 Sobic003G239100 Sobic001G388000--Sobic003G239100 Sobic001G388000--Sobic001G484000 Sobic002G028500 Sobic002G028500 Sobic001G129600--Sobic002G028500 Sobic001G129600--Sobic005G145100 Sobic001G129600--Sobic004G290300 Sobic001G129600--Sobic001G140800 Sobic001G129600--Sobic001G388000 Sobic001G129600--Sobic010G133932 Sobic004G266700 Sobic004G266700 Sobic001G129600--Sobic004G266700 Sobic001G129600--Sobic005G087400 Sobic001G129600--Sobic003G239100 Sobic003G272900--Sobic005G110600 Sobic003G272900--Sobic005G130700 Sobic003G272900--Sobic001G140800 Sobic003G272900--Sobic005G087400 Sobic003G272900--Sobic003G006100 Sobic009G134000 Sobic009G134000 Sobic003G272900--Sobic009G134000 Sobic010G119900 Sobic010G119900 Sobic003G272900--Sobic010G119900 Sobic006G245600 Sobic006G245600 Sobic003G272900--Sobic006G245600 Sobic003G272900--Sobic004G150800 Sobic005G145100--Sobic002G028500 Sobic005G145100--Sobic001G208600 Sobic005G145100--Sobic003G239100 Sobic005G145100--Sobic004G290300 Sobic005G145100--Sobic001G129600 Sobic005G145100--Sobic004G266700 Sobic005G145100--Sobic001G140800 Sobic005G145100--Sobic001G388000 Sobic001G144800 Sobic001G144800 Sobic005G145100--Sobic001G144800 Sobic005G110600--Sobic005G130700 Sobic005G110600--Sobic006G062300 Sobic005G110600--Sobic004G297950 Sobic005G110600--Sobic001G140800 Sobic005G110600--Sobic003G419600 Sobic005G110600--Sobic010G133932 Sobic010G007000 Sobic010G007000 Sobic005G110600--Sobic010G007000 Sobic005G110600--Sobic003G269100 Sobic005G110600--Sobic001G484000 Sobic003G006100--Sobic010G119900 Sobic003G006100--Sobic003G419600 Sobic003G006100--Sobic001G140800 Sobic003G006100--Sobic004G150800 Sobic010G124200 Sobic010G124200 Sobic003G006100--Sobic010G124200 Sobic007G090424 Sobic007G090424 Sobic003G006100--Sobic007G090424 Sobic003G006100--Sobic006G096500 Sobic010G228100 Sobic010G228100 Sobic003G006100--Sobic010G228100 Sobic003G006100--Sobic001G037400
Octagon: transcription factors


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