Gene annotation
Transcriptome id Sobic.008G164900.1
Synonym Sb08g021090
Functional annotation membrane associated DUF588 domain containing protein, putative, expressed
UniProt C5YRU8
Pfam PF04535
Panther DB PTHR11615 PTHR11615:SF146
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G44550 : Uncharacterised protein family (UPF0497)
RAP-DB (Rice) LOC_Os12g41690.1 : membrane associated DUF588 domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a004666
Brachypodium -
Barley -
Wheat TraesCS5A02G049000 , TraesCS5D02G059600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G163000 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR57 - Auxin-responsive SAUR gene family member, expressed -
2 Sobic.002G072200 expressed protein -
3 Sobic.010G086800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@plastocyanin-like domain containing protein, putative, expressed -
4 Sobic.003G062000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@fasciclin domain containing protein, expressed -
5 Sobic.001G334900 X8 domain containing protein, expressed -
6 Sobic.004G168700 harpin-induced protein 1 domain containing protein, expressed -
7 Sobic.001G208600 receptor kinase like protein, putative, expressed -
8 Sobic.007G090424 - K01061: carboxymethylenebutenolidase
9 Sobic.001G345900 zinc finger, C3HC4 type domain containing protein, expressed -
10 Sobic.003G427900 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Cupin domain containing protein, expressed -
11 Sobic.003G386200 zinc finger, C3HC4 type domain containing protein, expressed -
12 Sobic.009G032600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@peroxidase precursor, putative, expressed K00430: peroxidase
13 Sobic.006G084500 expressed protein -
14 Sobic.002G003200 peroxidase precursor, putative, expressed K00430: peroxidase
15 Sobic.002G028500 app1, putative, expressed -
16 Sobic.006G001000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@cytochrome P450 93A2, putative, expressed -
17 Sobic.003G108000 expressed protein -
18 Sobic.001G502500 zinc finger, C3HC4 type domain containing protein, expressed -
19 Sobic.005G145100 phospholipase A2, putative, expressed -
20 Sobic.006G075000 Late embryogenesis abundant hydroxyproline-rich glycoprotein("PubMedID : 26759170,PubMedID : 24597475")@harpin-induced protein 1 domain containing protein, expressed -


Gene co-expression network
sample Sobic008G164900 Sobic008G164900 Sobic008G163000 Sobic008G163000 Sobic008G164900--Sobic008G163000 Sobic002G072200 Sobic002G072200 Sobic008G164900--Sobic002G072200 Sobic010G086800 Sobic010G086800 Sobic008G164900--Sobic010G086800 Sobic003G062000 Sobic003G062000 Sobic008G164900--Sobic003G062000 Sobic001G334900 Sobic001G334900 Sobic008G164900--Sobic001G334900 Sobic004G168700 Sobic004G168700 Sobic008G164900--Sobic004G168700 Sobic001G208600 Sobic001G208600 Sobic008G164900--Sobic001G208600 Sobic007G090424 Sobic007G090424 Sobic008G164900--Sobic007G090424 Sobic001G345900 Sobic001G345900 Sobic008G164900--Sobic001G345900 Sobic001G275600 Sobic001G275600 Sobic008G163000--Sobic001G275600 Sobic006G001000 Sobic006G001000 Sobic008G163000--Sobic006G001000 Sobic009G119400 Sobic009G119400 Sobic008G163000--Sobic009G119400 Sobic004G344200 Sobic004G344200 Sobic008G163000--Sobic004G344200 Sobic008G163000--Sobic008G164900 Sobic009G151000 Sobic009G151000 Sobic008G163000--Sobic009G151000 Sobic010G196400 Sobic010G196400 Sobic008G163000--Sobic010G196400 Sobic002G003200 Sobic002G003200 Sobic008G163000--Sobic002G003200 Sobic003G108000 Sobic003G108000 Sobic008G163000--Sobic003G108000 Sobic009G032600 Sobic009G032600 Sobic002G072200--Sobic009G032600 Sobic006G075000 Sobic006G075000 Sobic002G072200--Sobic006G075000 Sobic002G072200--Sobic003G062000 Sobic009G226900 Sobic009G226900 Sobic002G072200--Sobic009G226900 Sobic009G232200 Sobic009G232200 Sobic002G072200--Sobic009G232200 Sobic006G036400 Sobic006G036400 Sobic002G072200--Sobic006G036400 Sobic002G072200--Sobic010G086800 Sobic002G072200--Sobic001G208600 Sobic003G099166 Sobic003G099166 Sobic002G072200--Sobic003G099166 Sobic010G086800--Sobic003G062000 Sobic010G086800--Sobic004G168700 Sobic010G086800--Sobic009G032600 Sobic010G086800--Sobic006G036400 Sobic010G086800--Sobic009G226900 Sobic003G427900 Sobic003G427900 Sobic010G086800--Sobic003G427900 Sobic010G086800--Sobic002G072200 Sobic001G107100 Sobic001G107100 Sobic010G086800--Sobic001G107100 Sobic009G162500 Sobic009G162500 Sobic010G086800--Sobic009G162500 Sobic003G062000--Sobic009G226900 Sobic003G062000--Sobic006G036400 Sobic003G062000--Sobic010G086800 Sobic001G224300 Sobic001G224300 Sobic003G062000--Sobic001G224300 Sobic003G296400 Sobic003G296400 Sobic003G062000--Sobic003G296400 Sobic003G062000--Sobic002G072200 Sobic003G062000--Sobic006G075000 Sobic003G062000--Sobic009G032600 Sobic003G386200 Sobic003G386200 Sobic003G062000--Sobic003G386200 Sobic001G334900--Sobic009G232200 Sobic001G012600 Sobic001G012600 Sobic001G334900--Sobic001G012600 Sobic010G228100 Sobic010G228100 Sobic001G334900--Sobic010G228100 Sobic001G334900--Sobic001G208600 Sobic009G033400 Sobic009G033400 Sobic001G334900--Sobic009G033400 Sobic002G347300 Sobic002G347300 Sobic001G334900--Sobic002G347300 Sobic007G050600 Sobic007G050600 Sobic001G334900--Sobic007G050600 Sobic001G012200 Sobic001G012200 Sobic001G334900--Sobic001G012200 Sobic009G063400 Sobic009G063400 Sobic001G334900--Sobic009G063400 Sobic004G168700--Sobic010G086800 Sobic004G168700--Sobic009G032600 Sobic004G168700--Sobic009G232200 Sobic008G082400 Sobic008G082400 Sobic004G168700--Sobic008G082400 Sobic009G211800 Sobic009G211800 Sobic004G168700--Sobic009G211800 Sobic004G168700--Sobic002G072200 Sobic004G243800 Sobic004G243800 Sobic004G168700--Sobic004G243800 Sobic004G168700--Sobic009G226900 Sobic004G168700--Sobic003G108000 Sobic005G145100 Sobic005G145100 Sobic001G208600--Sobic005G145100 Sobic001G208600--Sobic003G099166 Sobic001G208600--Sobic006G075000 Sobic003G239100 Sobic003G239100 Sobic001G208600--Sobic003G239100 Sobic009G017500 Sobic009G017500 Sobic001G208600--Sobic009G017500 Sobic002G053900 Sobic002G053900 Sobic001G208600--Sobic002G053900 Sobic001G208600--Sobic001G334900 Sobic002G030800 Sobic002G030800 Sobic001G208600--Sobic002G030800 Sobic003G352700 Sobic003G352700 Sobic001G208600--Sobic003G352700 Sobic001G127700 Sobic001G127700 Sobic007G090424--Sobic001G127700 Sobic006G084500 Sobic006G084500 Sobic007G090424--Sobic006G084500 Sobic006G172700 Sobic006G172700 Sobic007G090424--Sobic006G172700 Sobic008G123600 Sobic008G123600 Sobic007G090424--Sobic008G123600 Sobic003G006100 Sobic003G006100 Sobic007G090424--Sobic003G006100 Sobic005G056201 Sobic005G056201 Sobic007G090424--Sobic005G056201 Sobic007G009600 Sobic007G009600 Sobic007G090424--Sobic007G009600 Sobic001G003600 Sobic001G003600 Sobic007G090424--Sobic001G003600 Sobic004G060700 Sobic004G060700 Sobic007G090424--Sobic004G060700 Sobic001G345900--Sobic001G334900 Sobic001G345900--Sobic002G347300 Sobic001G345900--Sobic001G012200 Sobic001G345900--Sobic001G012600 Sobic001G345900--Sobic002G072200 Sobic004G257700 Sobic004G257700 Sobic001G345900--Sobic004G257700 Sobic004G328601 Sobic004G328601 Sobic001G345900--Sobic004G328601 Sobic001G345900--Sobic009G033400 Sobic001G012300 Sobic001G012300 Sobic001G345900--Sobic001G012300
Octagon: transcription factors


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