Gene annotation
Transcriptome id Sobic.002G370400.1
Synonym Sb02g038920
Functional annotation expressed protein
UniProt C5XDY2
Pfam PF06708
Panther DB PTHR34358 PTHR34358:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G36660 : Protein of unknown function (DUF1195)
RAP-DB (Rice) LOC_Os07g41660.1 : expressed protein
MaizeGDB (Corn) Zm00025a015156
Brachypodium PNT74777 , KQK15305 , KQK00608
Barley HORVU2Hr1G032230.6 , HORVU2Hr1G032230.7 , HORVU2Hr1G032230.4 , HORVU2Hr1G032230.5 , HORVU2Hr1G032230.2 , HORVU2Hr1G032230.3 , HORVU2Hr1G032230.1 , HORVU2Hr1G070650.2 , HORVU2Hr1G084170.1 , HORVU2Hr1G084170.2 , HORVU2Hr1G070650.1
Wheat TraesCS2A02G345600 , TraesCS2A02G345600 , TraesCS2D02G344300 , TraesCS2D02G180200 , TraesCS2A02G173100 , TraesCS2B02G364100 , TraesCS2B02G199300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G487200 zinc finger, C3HC4 type domain containing protein, expressed K19045: E3 ubiquitin-protein ligase BIG BROTHER and related proteins
2 Sobic.001G231200 expressed protein -
3 Sobic.004G315700 kinesin motor domain containing protein, putative, expressed K11498: centromeric protein E
4 Sobic.006G272500 "PKc_like super family, protein kjinases, catalytic domain"(PubMedID : 29491869)@expressed protein -
5 Sobic.009G212100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@IQ calmodulin-binding motif family protein, putative, expressed -
6 Sobic.001G296800 WD repeat-containing protein 8, putative, expressed -
7 Sobic.009G124800 zinc finger, C3HC4 type domain containing protein, expressed -
8 Sobic.003G153900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
9 Sobic.010G211800 TKL_IRAK_CrRLK1L-1.14 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed -
10 Sobic.002G293700 ATXR, putative, expressed -
11 Sobic.008G169400 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root"(PubMedID : 20499123)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@auxin response factor, putative, expressed -
12 Sobic.001G113800 receptor protein kinase TMK1 precursor, putative, expressed -
13 Sobic.002G320600 HEAT repeat family protein, putative, expressed -
14 Sobic.002G001100 legume lectins beta domain containing protein, putative, expressed -
15 Sobic.003G031700 protein kinase family protein, putative, expressed -
16 Sobic.001G361200 expressed protein -
17 Sobic.001G296100 DUF630/DUF632 domains containing protein, putative, expressed -
18 Sobic.006G257200 kinesin motor domain containing protein, putative, expressed -
19 Sobic.001G285200 protein transport protein-related, putative, expressed -
20 Sobic.008G096200 AGC_PVPK_like_kin82y.19 - ACG kinases include homologs to PKA, PKG and PKC, expressed -


Gene co-expression network
sample Sobic002G370400 Sobic002G370400 Sobic001G487200 Sobic001G487200 Sobic002G370400--Sobic001G487200 Sobic001G231200 Sobic001G231200 Sobic002G370400--Sobic001G231200 Sobic004G315700 Sobic004G315700 Sobic002G370400--Sobic004G315700 Sobic006G272500 Sobic006G272500 Sobic002G370400--Sobic006G272500 Sobic009G212100 Sobic009G212100 Sobic002G370400--Sobic009G212100 Sobic001G296800 Sobic001G296800 Sobic002G370400--Sobic001G296800 Sobic009G124800 Sobic009G124800 Sobic002G370400--Sobic009G124800 Sobic003G153900 Sobic003G153900 Sobic002G370400--Sobic003G153900 Sobic010G211800 Sobic010G211800 Sobic002G370400--Sobic010G211800 Sobic001G487200--Sobic004G315700 Sobic001G487200--Sobic009G212100 Sobic001G369800 Sobic001G369800 Sobic001G487200--Sobic001G369800 Sobic001G487200--Sobic001G231200 Sobic001G487200--Sobic002G370400 Sobic003G226700 Sobic003G226700 Sobic001G487200--Sobic003G226700 Sobic001G540700 Sobic001G540700 Sobic001G487200--Sobic001G540700 Sobic001G487200--Sobic001G296800 Sobic007G084200 Sobic007G084200 Sobic001G487200--Sobic007G084200 Sobic008G096200 Sobic008G096200 Sobic001G231200--Sobic008G096200 Sobic001G231200--Sobic001G487200 Sobic001G231200--Sobic002G370400 Sobic001G231200--Sobic010G211800 Sobic010G105400 Sobic010G105400 Sobic001G231200--Sobic010G105400 Sobic010G129700 Sobic010G129700 Sobic001G231200--Sobic010G129700 Sobic003G013000 Sobic003G013000 Sobic001G231200--Sobic003G013000 Sobic003G444100 Sobic003G444100 Sobic001G231200--Sobic003G444100 Sobic002G394500 Sobic002G394500 Sobic001G231200--Sobic002G394500 Sobic004G315700--Sobic001G487200 Sobic004G315700--Sobic009G212100 Sobic004G315700--Sobic001G296800 Sobic009G052100 Sobic009G052100 Sobic004G315700--Sobic009G052100 Sobic006G084300 Sobic006G084300 Sobic004G315700--Sobic006G084300 Sobic003G420300 Sobic003G420300 Sobic004G315700--Sobic003G420300 Sobic006G218900 Sobic006G218900 Sobic004G315700--Sobic006G218900 Sobic003G345000 Sobic003G345000 Sobic004G315700--Sobic003G345000 Sobic004G315700--Sobic001G540700 Sobic006G272500--Sobic009G124800 Sobic001G285200 Sobic001G285200 Sobic006G272500--Sobic001G285200 Sobic002G293700 Sobic002G293700 Sobic006G272500--Sobic002G293700 Sobic010G010900 Sobic010G010900 Sobic006G272500--Sobic010G010900 Sobic002G419200 Sobic002G419200 Sobic006G272500--Sobic002G419200 Sobic001G296100 Sobic001G296100 Sobic006G272500--Sobic001G296100 Sobic007G160300 Sobic007G160300 Sobic006G272500--Sobic007G160300 Sobic006G272500--Sobic002G370400 Sobic008G148500 Sobic008G148500 Sobic006G272500--Sobic008G148500 Sobic009G212100--Sobic001G487200 Sobic009G212100--Sobic004G315700 Sobic009G212100--Sobic001G296800 Sobic009G212100--Sobic003G226700 Sobic009G212100--Sobic007G084200 Sobic006G267500 Sobic006G267500 Sobic009G212100--Sobic006G267500 Sobic009G212100--Sobic006G084300 Sobic009G212100--Sobic001G369800 Sobic006G254500 Sobic006G254500 Sobic009G212100--Sobic006G254500 Sobic001G296800--Sobic009G212100 Sobic001G296800--Sobic004G315700 Sobic010G103500 Sobic010G103500 Sobic001G296800--Sobic010G103500 Sobic001G296800--Sobic001G487200 Sobic004G129500 Sobic004G129500 Sobic001G296800--Sobic004G129500 Sobic001G361200 Sobic001G361200 Sobic001G296800--Sobic001G361200 Sobic001G296800--Sobic002G370400 Sobic001G212600 Sobic001G212600 Sobic001G296800--Sobic001G212600 Sobic001G296800--Sobic009G052100 Sobic009G124800--Sobic006G272500 Sobic009G124800--Sobic002G293700 Sobic001G074100 Sobic001G074100 Sobic009G124800--Sobic001G074100 Sobic009G124800--Sobic001G296100 Sobic001G381100 Sobic001G381100 Sobic009G124800--Sobic001G381100 Sobic006G241800 Sobic006G241800 Sobic009G124800--Sobic006G241800 Sobic009G124800--Sobic010G211800 Sobic009G124800--Sobic002G370400 Sobic004G115700 Sobic004G115700 Sobic009G124800--Sobic004G115700 Sobic003G351900 Sobic003G351900 Sobic003G153900--Sobic003G351900 Sobic008G169400 Sobic008G169400 Sobic003G153900--Sobic008G169400 Sobic002G021200 Sobic002G021200 Sobic003G153900--Sobic002G021200 Sobic006G281900 Sobic006G281900 Sobic003G153900--Sobic006G281900 Sobic001G079900 Sobic001G079900 Sobic003G153900--Sobic001G079900 Sobic003G153900--Sobic002G370400 Sobic003G153900--Sobic001G369800 Sobic003G153900--Sobic009G212100 Sobic006G008300 Sobic006G008300 Sobic003G153900--Sobic006G008300 Sobic010G211700 Sobic010G211700 Sobic010G211800--Sobic010G211700 Sobic002G360500 Sobic002G360500 Sobic010G211800--Sobic002G360500 Sobic002G417000 Sobic002G417000 Sobic010G211800--Sobic002G417000 Sobic003G031700 Sobic003G031700 Sobic010G211800--Sobic003G031700 Sobic002G045200 Sobic002G045200 Sobic010G211800--Sobic002G045200 Sobic010G211800--Sobic001G074100 Sobic002G362700 Sobic002G362700 Sobic010G211800--Sobic002G362700 Sobic010G211800--Sobic006G241800 Sobic010G211800--Sobic008G096200
Octagon: transcription factors


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