Gene annotation
Transcriptome id Sobic.010G050900.5,Sobic.010G050900.1,Sobic.010G050900.4
Synonym Sb10g004420
Functional annotation harpin-induced protein, putative, expressed
UniProt A0A194YHF4 , A0A1W0VRI2 , A0A1W0VRH5
Pfam PF03168
Panther DB PTHR31852 PTHR31852:SF25
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G45688 : -
RAP-DB (Rice) LOC_Os06g06780.1 : harpin-induced protein, putative, expressed
MaizeGDB (Corn) Zm00025a049924 , Zm00025a041611
Brachypodium -
Barley HORVU7Hr1G026150.2 , HORVU7Hr1G026150.1
Wheat TraesCS7B02G022400 , TraesCS7A02G123300 , TraesCS7D02G121400
Populus -


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cDNA sequences
Sobic.010G050900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G267700 fiber protein Fb34, putative, expressed -
2 Sobic.001G099100 endoglucanase, putative, expressed K01179: endoglucanase
3 Sobic.002G270700 OsRhmbd16 - Putative Rhomboid homologue, expressed -
4 Sobic.003G353400 DHHC zinc finger domain containing protein, expressed K18932: palmitoyltransferase
5 Sobic.002G118700 -(PubMedID : 28944535)@CESA3 - cellulose synthase, expressed K10999: cellulose synthase A
6 Sobic.004G272200 secretory carrier-associated membrane protein, putative, expressed -
7 Sobic.004G051300 galactosyltransferase, putative, expressed -
8 Sobic.009G195900 OsFBT9 - F-box and tubby domain containing protein, expressed -
9 Sobic.002G124700 up-regulated by silicon application(PubMedID : 24879770)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Up-regulated by osmotic stress.(PubMedID : 24879770)@aquaporin protein, putative, expressed K09872: aquaporin PIP
10 Sobic.010G123300 expressed protein -
11 Sobic.001G217000 DUF584 domain containing protein, putative, expressed -
12 Sobic.003G108200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
13 Sobic.007G180900 BAG domain-containing protein, putative, expressed -
14 Sobic.007G178200 ER lumen protein retaining receptor, putative, expressed -
15 Sobic.010G166700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@thaumatin, putative, expressed -
16 Sobic.006G236500 RNA recognition motif containing protein, putative, expressed -
17 Sobic.001G526200 homeobox protein knotted-1, putative, expressed -
18 Sobic.001G480800 Protein strubbelig-receptor family 7(PubMedID : 31721651)@STRUBBELIG-RECEPTOR FAMILY 6 precursor, putative, expressed -
19 Sobic.001G512000 cyclin-dependent kinase inhibitor, putative, expressed -
20 Sobic.010G258500 arogenate dehydrogenase 1, chloroplast precursor, putative, expressed -


Gene co-expression network
sample Sobic010G050900 Sobic010G050900 Sobic006G267700 Sobic006G267700 Sobic010G050900--Sobic006G267700 Sobic001G099100 Sobic001G099100 Sobic010G050900--Sobic001G099100 Sobic002G270700 Sobic002G270700 Sobic010G050900--Sobic002G270700 Sobic003G353400 Sobic003G353400 Sobic010G050900--Sobic003G353400 Sobic002G118700 Sobic002G118700 Sobic010G050900--Sobic002G118700 Sobic004G272200 Sobic004G272200 Sobic010G050900--Sobic004G272200 Sobic004G051300 Sobic004G051300 Sobic010G050900--Sobic004G051300 Sobic009G195900 Sobic009G195900 Sobic010G050900--Sobic009G195900 Sobic002G124700 Sobic002G124700 Sobic010G050900--Sobic002G124700 Sobic006G267700--Sobic002G270700 Sobic006G267700--Sobic010G050900 Sobic001G217000 Sobic001G217000 Sobic006G267700--Sobic001G217000 Sobic004G268700 Sobic004G268700 Sobic006G267700--Sobic004G268700 Sobic002G379400 Sobic002G379400 Sobic006G267700--Sobic002G379400 Sobic003G392200 Sobic003G392200 Sobic006G267700--Sobic003G392200 Sobic007G011000 Sobic007G011000 Sobic006G267700--Sobic007G011000 Sobic002G210300 Sobic002G210300 Sobic006G267700--Sobic002G210300 Sobic004G025000 Sobic004G025000 Sobic006G267700--Sobic004G025000 Sobic001G099100--Sobic004G051300 Sobic001G099100--Sobic002G118700 Sobic002G276600 Sobic002G276600 Sobic001G099100--Sobic002G276600 Sobic002G075500 Sobic002G075500 Sobic001G099100--Sobic002G075500 Sobic010G090500 Sobic010G090500 Sobic001G099100--Sobic010G090500 Sobic009G026101 Sobic009G026101 Sobic001G099100--Sobic009G026101 Sobic009G125900 Sobic009G125900 Sobic001G099100--Sobic009G125900 Sobic001G099100--Sobic003G353400 Sobic009G079100 Sobic009G079100 Sobic001G099100--Sobic009G079100 Sobic004G273200 Sobic004G273200 Sobic002G270700--Sobic004G273200 Sobic002G270700--Sobic003G392200 Sobic001G525400 Sobic001G525400 Sobic002G270700--Sobic001G525400 Sobic003G338900 Sobic003G338900 Sobic002G270700--Sobic003G338900 Sobic002G270700--Sobic006G267700 Sobic002G330300 Sobic002G330300 Sobic002G270700--Sobic002G330300 Sobic007G178200 Sobic007G178200 Sobic002G270700--Sobic007G178200 Sobic006G263100 Sobic006G263100 Sobic002G270700--Sobic006G263100 Sobic002G197600 Sobic002G197600 Sobic002G270700--Sobic002G197600 Sobic004G337900 Sobic004G337900 Sobic003G353400--Sobic004G337900 Sobic003G353400--Sobic001G099100 Sobic007G225300 Sobic007G225300 Sobic003G353400--Sobic007G225300 Sobic006G242100 Sobic006G242100 Sobic003G353400--Sobic006G242100 Sobic009G030200 Sobic009G030200 Sobic003G353400--Sobic009G030200 Sobic003G353400--Sobic007G178200 Sobic003G319000 Sobic003G319000 Sobic003G353400--Sobic003G319000 Sobic003G353400--Sobic010G050900 Sobic003G312400 Sobic003G312400 Sobic003G353400--Sobic003G312400 Sobic009G063400 Sobic009G063400 Sobic002G118700--Sobic009G063400 Sobic002G118700--Sobic009G125900 Sobic002G118700--Sobic002G075500 Sobic002G118700--Sobic001G099100 Sobic002G118700--Sobic004G051300 Sobic002G118700--Sobic009G026101 Sobic002G118700--Sobic010G090500 Sobic007G180900 Sobic007G180900 Sobic002G118700--Sobic007G180900 Sobic002G118700--Sobic002G276600 Sobic008G103700 Sobic008G103700 Sobic004G272200--Sobic008G103700 Sobic002G252000 Sobic002G252000 Sobic004G272200--Sobic002G252000 Sobic001G007600 Sobic001G007600 Sobic004G272200--Sobic001G007600 Sobic010G238800 Sobic010G238800 Sobic004G272200--Sobic010G238800 Sobic006G156000 Sobic006G156000 Sobic004G272200--Sobic006G156000 Sobic004G138800 Sobic004G138800 Sobic004G272200--Sobic004G138800 Sobic002G128800 Sobic002G128800 Sobic004G272200--Sobic002G128800 Sobic006G236500 Sobic006G236500 Sobic004G272200--Sobic006G236500 Sobic001G096100 Sobic001G096100 Sobic004G272200--Sobic001G096100 Sobic004G051300--Sobic001G099100 Sobic004G051300--Sobic002G118700 Sobic004G051300--Sobic009G125900 Sobic004G051300--Sobic002G075500 Sobic004G051300--Sobic009G026101 Sobic004G051300--Sobic002G276600 Sobic004G051300--Sobic009G079100 Sobic004G051300--Sobic010G090500 Sobic004G051300--Sobic009G063400 Sobic008G188700 Sobic008G188700 Sobic009G195900--Sobic008G188700 Sobic008G016900 Sobic008G016900 Sobic009G195900--Sobic008G016900 Sobic009G195900--Sobic007G178200 Sobic004G257300 Sobic004G257300 Sobic009G195900--Sobic004G257300 Sobic009G195900--Sobic002G330300 Sobic009G195900--Sobic002G124700 Sobic001G416600 Sobic001G416600 Sobic009G195900--Sobic001G416600 Sobic009G195900--Sobic002G270700 Sobic009G195900--Sobic001G217000 Sobic002G124700--Sobic004G257300 Sobic006G176700 Sobic006G176700 Sobic002G124700--Sobic006G176700 Sobic003G305601 Sobic003G305601 Sobic002G124700--Sobic003G305601 Sobic002G270000 Sobic002G270000 Sobic002G124700--Sobic002G270000 Sobic002G124700--Sobic001G217000 Sobic004G288700 Sobic004G288700 Sobic002G124700--Sobic004G288700 Sobic002G124700--Sobic009G195900 Sobic001G084100 Sobic001G084100 Sobic002G124700--Sobic001G084100 Sobic003G108200 Sobic003G108200 Sobic002G124700--Sobic003G108200
Octagon: transcription factors


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