Gene annotation
Transcriptome id Sobic.008G186500.2,Sobic.008G186500.1
Synonym XK-2, XK2, Sb08g022800
Functional annotation FGGY family of carbohydrate kinases, putative, expressed
UniProt C5YSZ1 , A0A1Z5R7H6
Pfam PF00370 PF02782
Panther DB PTHR10196 PTHR10196:SF57
NCBI CDD -
KEGG Orthology K00854; xylB, xylulokinase
Gene Ontology GO:0016773; phosphotransferase activity, alcohol group as acceptor GO:0005975carbohydrate metabolic process


Orthologs (automatic annotation)
TAIR AT5G49650 : xylulose kinase-2
RAP-DB (Rice) LOC_Os12g43664.1 : FGGY family of carbohydrate kinases, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley HORVU2Hr1G086910.41 , HORVU2Hr1G086910.40 , HORVU2Hr1G086910.43 , HORVU2Hr1G086910.42 , HORVU2Hr1G086910.29 , HORVU2Hr1G086910.28 , HORVU2Hr1G086910.23 , HORVU2Hr1G086910.22 , HORVU2Hr1G086910.21 , HORVU2Hr1G086910.20 , HORVU2Hr1G086910.27 , HORVU2Hr1G086910.26 , HORVU2Hr1G086910.24 , HORVU2Hr1G086910.38 , HORVU2Hr1G086910.39 , HORVU2Hr1G086910.30 , HORVU2Hr1G086910.31 , HORVU2Hr1G086910.33 , HORVU2Hr1G086910.34 , HORVU2Hr1G086910.35 , HORVU2Hr1G086910.36 , HORVU2Hr1G086910.37 , HORVU2Hr1G086910.8 , HORVU2Hr1G086910.9 , HORVU2Hr1G086910.1 , HORVU2Hr1G086910.2 , HORVU2Hr1G086910.3 , HORVU2Hr1G086910.4 , HORVU2Hr1G086910.5 , HORVU2Hr1G086910.6 , HORVU2Hr1G086910.7 , HORVU2Hr1G086910.12 , HORVU2Hr1G086910.13 , HORVU2Hr1G086910.10 , HORVU2Hr1G086910.11 , HORVU2Hr1G086910.16 , HORVU2Hr1G086910.17 , HORVU2Hr1G086910.14 , HORVU2Hr1G086910.15 , HORVU2Hr1G086910.18 , HORVU2Hr1G086910.19
Wheat TraesCS2D02G356100 , TraesCS2B02G376500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G157700 expressed protein -
2 Sobic.003G267000 1-aminocyclopropane-1-carboxylate deaminase, putative, expressed -
3 Sobic.002G141900 -(PubMedID : 26976818)@Citrate transporter protein, putative, expressed -
4 Sobic.003G165800 UDP-N-acetylglucosamine--N-acetylmuramyl-pyrophosphor yl-undecaprenol N-acetylglucosamine transferase, putative, expressed K02563: UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase
5 Sobic.003G420900 S-formylglutathione hydrolase, putative, expressed K01070: frmB, ESD, S-formylglutathione hydrolase
6 Sobic.004G015700 serine/threonine-protein kinase receptor precursor, putative, expressed -
7 Sobic.008G088842 - -
8 Sobic.010G134500 exonuclease, putative, expressed -
9 Sobic.001G321400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CCB2, putative, expressed -
10 Sobic.007G070000 polyprenyl synthetase, putative, expressed K14066: geranyl diphosphate synthase
11 Sobic.001G047200 carboxyl-terminal peptidase, putative, expressed -
12 Sobic.005G132400 lysosomal alpha-mannosidase precursor, putative, expressed K01191: alpha-mannosidase
13 Sobic.001G236800 tRNA methyltransferase, putative, expressed K00927: PGK, phosphoglycerate kinase
14 Sobic.001G532700 WD repeat-containing protein 44, putative, expressed -
15 Sobic.003G071600 3-oxo-5-alpha-steroid 4-dehydrogenase, putative, expressed K10258: TER, TSC13, very-long-chain enoyl-CoA reductase
16 Sobic.002G272400 expressed protein -
17 Sobic.004G109000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@chalcone isomerase 3, putative, expressed -
18 Sobic.001G371700 zinc finger protein, putative, expressed -
19 Sobic.008G064601 - -
20 Sobic.002G064400 expressed protein -


Gene co-expression network
sample Sobic008G186500 Sobic008G186500 Sobic010G157700 Sobic010G157700 Sobic008G186500--Sobic010G157700 Sobic003G267000 Sobic003G267000 Sobic008G186500--Sobic003G267000 Sobic002G141900 Sobic002G141900 Sobic008G186500--Sobic002G141900 Sobic003G165800 Sobic003G165800 Sobic008G186500--Sobic003G165800 Sobic003G420900 Sobic003G420900 Sobic008G186500--Sobic003G420900 Sobic004G015700 Sobic004G015700 Sobic008G186500--Sobic004G015700 Sobic008G088842 Sobic008G088842 Sobic008G186500--Sobic008G088842 Sobic010G134500 Sobic010G134500 Sobic008G186500--Sobic010G134500 Sobic001G321400 Sobic001G321400 Sobic008G186500--Sobic001G321400 Sobic009G096100 Sobic009G096100 Sobic010G157700--Sobic009G096100 Sobic001G236800 Sobic001G236800 Sobic010G157700--Sobic001G236800 Sobic008G100400 Sobic008G100400 Sobic010G157700--Sobic008G100400 Sobic010G157700--Sobic008G186500 Sobic007G182600 Sobic007G182600 Sobic010G157700--Sobic007G182600 Sobic002G380100 Sobic002G380100 Sobic010G157700--Sobic002G380100 Sobic007G000400 Sobic007G000400 Sobic010G157700--Sobic007G000400 Sobic010G157700--Sobic003G267000 Sobic010G157700--Sobic001G321400 Sobic003G267000--Sobic002G141900 Sobic004G144400 Sobic004G144400 Sobic003G267000--Sobic004G144400 Sobic003G267000--Sobic008G186500 Sobic003G267000--Sobic010G157700 Sobic003G345900 Sobic003G345900 Sobic003G267000--Sobic003G345900 Sobic010G120300 Sobic010G120300 Sobic003G267000--Sobic010G120300 Sobic004G275600 Sobic004G275600 Sobic003G267000--Sobic004G275600 Sobic008G038600 Sobic008G038600 Sobic003G267000--Sobic008G038600 Sobic006G208400 Sobic006G208400 Sobic003G267000--Sobic006G208400 Sobic002G272400 Sobic002G272400 Sobic002G141900--Sobic002G272400 Sobic006G281066 Sobic006G281066 Sobic002G141900--Sobic006G281066 Sobic002G141900--Sobic003G267000 Sobic010G027200 Sobic010G027200 Sobic002G141900--Sobic010G027200 Sobic002G141900--Sobic003G165800 Sobic002G141900--Sobic006G208400 Sobic001G104300 Sobic001G104300 Sobic002G141900--Sobic001G104300 Sobic002G140000 Sobic002G140000 Sobic002G141900--Sobic002G140000 Sobic001G027100 Sobic001G027100 Sobic002G141900--Sobic001G027100 Sobic003G165800--Sobic001G104300 Sobic003G165800--Sobic002G141900 Sobic003G165800--Sobic003G420900 Sobic001G021500 Sobic001G021500 Sobic003G165800--Sobic001G021500 Sobic001G441200 Sobic001G441200 Sobic003G165800--Sobic001G441200 Sobic003G165800--Sobic006G281066 Sobic005G022000 Sobic005G022000 Sobic003G165800--Sobic005G022000 Sobic009G055900 Sobic009G055900 Sobic003G165800--Sobic009G055900 Sobic002G363500 Sobic002G363500 Sobic003G165800--Sobic002G363500 Sobic001G376700 Sobic001G376700 Sobic003G420900--Sobic001G376700 Sobic004G296800 Sobic004G296800 Sobic003G420900--Sobic004G296800 Sobic003G420900--Sobic003G165800 Sobic009G231100 Sobic009G231100 Sobic003G420900--Sobic009G231100 Sobic002G333100 Sobic002G333100 Sobic003G420900--Sobic002G333100 Sobic003G420900--Sobic004G275600 Sobic003G420900--Sobic010G134500 Sobic003G261200 Sobic003G261200 Sobic003G420900--Sobic003G261200 Sobic001G543700 Sobic001G543700 Sobic003G420900--Sobic001G543700 Sobic006G263800 Sobic006G263800 Sobic004G015700--Sobic006G263800 Sobic003G383500 Sobic003G383500 Sobic004G015700--Sobic003G383500 Sobic009G083300 Sobic009G083300 Sobic004G015700--Sobic009G083300 Sobic007G013400 Sobic007G013400 Sobic004G015700--Sobic007G013400 Sobic001G099000 Sobic001G099000 Sobic004G015700--Sobic001G099000 Sobic004G015700--Sobic001G236800 Sobic002G190100 Sobic002G190100 Sobic004G015700--Sobic002G190100 Sobic009G212000 Sobic009G212000 Sobic004G015700--Sobic009G212000 Sobic004G015700--Sobic003G261200 Sobic010G138900 Sobic010G138900 Sobic008G088842--Sobic010G138900 Sobic006G140600 Sobic006G140600 Sobic008G088842--Sobic006G140600 Sobic002G143200 Sobic002G143200 Sobic008G088842--Sobic002G143200 Sobic010G262100 Sobic010G262100 Sobic008G088842--Sobic010G262100 Sobic003G311600 Sobic003G311600 Sobic008G088842--Sobic003G311600 Sobic001G451300 Sobic001G451300 Sobic008G088842--Sobic001G451300 Sobic006G280100 Sobic006G280100 Sobic008G088842--Sobic006G280100 Sobic008G088842--Sobic006G208400 Sobic002G340200 Sobic002G340200 Sobic008G088842--Sobic002G340200 Sobic009G210100 Sobic009G210100 Sobic010G134500--Sobic009G210100 Sobic010G134500--Sobic001G104300 Sobic002G078000 Sobic002G078000 Sobic010G134500--Sobic002G078000 Sobic007G070000 Sobic007G070000 Sobic010G134500--Sobic007G070000 Sobic003G267500 Sobic003G267500 Sobic010G134500--Sobic003G267500 Sobic010G134500--Sobic003G420900 Sobic010G134500--Sobic005G022000 Sobic010G134500--Sobic002G363500 Sobic001G161400 Sobic001G161400 Sobic010G134500--Sobic001G161400 Sobic001G321400--Sobic002G140000 Sobic001G321400--Sobic010G027200 Sobic001G321400--Sobic006G263800 Sobic007G116100 Sobic007G116100 Sobic001G321400--Sobic007G116100 Sobic004G255500 Sobic004G255500 Sobic001G321400--Sobic004G255500 Sobic001G321400--Sobic006G281066 Sobic006G237100 Sobic006G237100 Sobic001G321400--Sobic006G237100 Sobic007G015300 Sobic007G015300 Sobic001G321400--Sobic007G015300 Sobic001G395300 Sobic001G395300 Sobic001G321400--Sobic001G395300
Octagon: transcription factors


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