Gene annotation
Transcriptome id Sobic.007G026200.1
Synonym Sb07g002290, CJD1
Functional annotation heat shock protein DnaJ, putative, expressed
UniProt C5YMK5
Pfam PF11833
Panther DB PTHR33372 PTHR33372:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G08640 : Chloroplast J-like domain 1
RAP-DB (Rice) LOC_Os08g03380.1 : heat shock protein DnaJ, putative, expressed
MaizeGDB (Corn) Zm00025a040353 , Zm00025a030207
Brachypodium PNT66571
Barley HORVU7Hr1G074580.9 , HORVU7Hr1G074580.3 , HORVU7Hr1G074580.2 , HORVU7Hr1G074580.1 , HORVU7Hr1G074580.7 , HORVU7Hr1G074580.6 , HORVU7Hr1G074580.5 , HORVU7Hr1G074580.4 , HORVU7Hr1G074580.13 , HORVU7Hr1G074580.12 , HORVU7Hr1G074580.11 , HORVU7Hr1G074580.10 , HORVU7Hr1G074580.14 , HORVU7Hr1G074580.8
Wheat TraesCS7B02G212200 , TraesCS7A02G312500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G069500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@GTP-binding protein, putative, expressed K06942: ribosome-binding ATPase
2 Sobic.007G211100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RNA methyltransferase, TrmH family protein, putative, expressed K03216: trmL, tRNA (cytidine/uridine-2'-O-)-methyltransferase
3 Sobic.001G188600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Rf1, mitochondrial precursor, putative, expressed -
4 Sobic.004G109000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@chalcone isomerase 3, putative, expressed -
5 Sobic.002G189600 expressed protein -
6 Sobic.006G281066 - -
7 Sobic.010G012900 superoxide dismutase, chloroplast, putative, expressed K04564: superoxide dismutase, Fe-Mn family
8 Sobic.001G357200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RNA recognition motif containing protein, putative, expressed K11294: NCL, nucleolin
9 Sobic.004G296800 3-isopropylmalate dehydratase small subunit 2, putative, expressed K01704: leuD, 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit
10 Sobic.003G292300 tRNA synthetase, putative, expressed K01867: WARS, tryptophanyl-tRNA synthetase
11 Sobic.005G022000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Mpv17 / PMP22 family domain containing protein, expressed K13347: PXMP2, peroxisomal membrane protein 2
12 Sobic.001G104300 differentiation protein, putative, expressed K09761: 16S rRNA (uracil1498-N3)-methyltransferase
13 Sobic.008G123600 nucleoside diphosphate kinase, putative, expressed K00940: ndk, nucleoside-diphosphate kinase
14 Sobic.007G166600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@copper/zinc superoxide dismutase, putative, expressed K04565: superoxide dismutase, Cu-Zn family
15 Sobic.004G070800 tic21, putative, expressed -
16 Sobic.003G383500 rhodanese-like, putative, expressed -
17 Sobic.009G001500 peptidyl-prolyl cis-trans isomerase, putative, expressed K03768: PPIB, peptidyl-prolyl cis-trans isomerase B (cyclophilin B)
18 Sobic.006G114300 pentatricopeptide, putative, expressed -
19 Sobic.001G441200 translocase of chloroplast 34, putative, expressed -
20 Sobic.001G151700 glutamyl-tRNA, putative, expressed K02435: gatC, aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C


Gene co-expression network
sample Sobic007G026200 Sobic007G026200 Sobic001G069500 Sobic001G069500 Sobic007G026200--Sobic001G069500 Sobic007G211100 Sobic007G211100 Sobic007G026200--Sobic007G211100 Sobic001G188600 Sobic001G188600 Sobic007G026200--Sobic001G188600 Sobic004G109000 Sobic004G109000 Sobic007G026200--Sobic004G109000 Sobic002G189600 Sobic002G189600 Sobic007G026200--Sobic002G189600 Sobic006G281066 Sobic006G281066 Sobic007G026200--Sobic006G281066 Sobic010G012900 Sobic010G012900 Sobic007G026200--Sobic010G012900 Sobic001G357200 Sobic001G357200 Sobic007G026200--Sobic001G357200 Sobic004G296800 Sobic004G296800 Sobic007G026200--Sobic004G296800 Sobic009G098100 Sobic009G098100 Sobic001G069500--Sobic009G098100 Sobic001G069500--Sobic001G188600 Sobic001G069500--Sobic007G211100 Sobic003G295800 Sobic003G295800 Sobic001G069500--Sobic003G295800 Sobic003G383600 Sobic003G383600 Sobic001G069500--Sobic003G383600 Sobic008G123600 Sobic008G123600 Sobic001G069500--Sobic008G123600 Sobic009G001500 Sobic009G001500 Sobic001G069500--Sobic009G001500 Sobic008G030000 Sobic008G030000 Sobic001G069500--Sobic008G030000 Sobic007G013400 Sobic007G013400 Sobic001G069500--Sobic007G013400 Sobic007G211100--Sobic001G069500 Sobic007G211100--Sobic007G013400 Sobic003G383500 Sobic003G383500 Sobic007G211100--Sobic003G383500 Sobic007G211100--Sobic009G001500 Sobic007G211100--Sobic004G109000 Sobic007G211100--Sobic001G188600 Sobic007G211100--Sobic003G295800 Sobic007G211100--Sobic008G123600 Sobic007G211100--Sobic009G098100 Sobic001G188600--Sobic001G069500 Sobic006G114300 Sobic006G114300 Sobic001G188600--Sobic006G114300 Sobic001G188600--Sobic001G357200 Sobic001G188600--Sobic009G098100 Sobic001G188600--Sobic010G012900 Sobic001G188600--Sobic004G109000 Sobic001G188600--Sobic007G211100 Sobic004G253800 Sobic004G253800 Sobic001G188600--Sobic004G253800 Sobic001G188600--Sobic008G030000 Sobic004G109000--Sobic001G188600 Sobic004G109000--Sobic007G211100 Sobic004G109000--Sobic006G114300 Sobic004G109000--Sobic003G383500 Sobic009G059100 Sobic009G059100 Sobic004G109000--Sobic009G059100 Sobic004G109000--Sobic001G069500 Sobic006G025700 Sobic006G025700 Sobic004G109000--Sobic006G025700 Sobic004G109000--Sobic007G013400 Sobic001G215300 Sobic001G215300 Sobic004G109000--Sobic001G215300 Sobic010G221600 Sobic010G221600 Sobic002G189600--Sobic010G221600 Sobic002G189600--Sobic007G026200 Sobic001G478600 Sobic001G478600 Sobic002G189600--Sobic001G478600 Sobic004G162500 Sobic004G162500 Sobic002G189600--Sobic004G162500 Sobic009G160500 Sobic009G160500 Sobic002G189600--Sobic009G160500 Sobic003G292300 Sobic003G292300 Sobic002G189600--Sobic003G292300 Sobic008G011300 Sobic008G011300 Sobic002G189600--Sobic008G011300 Sobic001G441200 Sobic001G441200 Sobic002G189600--Sobic001G441200 Sobic002G189600--Sobic007G211100 Sobic004G214400 Sobic004G214400 Sobic006G281066--Sobic004G214400 Sobic001G104300 Sobic001G104300 Sobic006G281066--Sobic001G104300 Sobic001G543700 Sobic001G543700 Sobic006G281066--Sobic001G543700 Sobic002G363500 Sobic002G363500 Sobic006G281066--Sobic002G363500 Sobic001G395300 Sobic001G395300 Sobic006G281066--Sobic001G395300 Sobic003G236300 Sobic003G236300 Sobic006G281066--Sobic003G236300 Sobic010G027200 Sobic010G027200 Sobic006G281066--Sobic010G027200 Sobic002G140000 Sobic002G140000 Sobic006G281066--Sobic002G140000 Sobic001G321400 Sobic001G321400 Sobic006G281066--Sobic001G321400 Sobic010G012900--Sobic001G188600 Sobic010G012900--Sobic001G357200 Sobic010G011200 Sobic010G011200 Sobic010G012900--Sobic010G011200 Sobic001G383900 Sobic001G383900 Sobic010G012900--Sobic001G383900 Sobic001G172300 Sobic001G172300 Sobic010G012900--Sobic001G172300 Sobic007G034500 Sobic007G034500 Sobic010G012900--Sobic007G034500 Sobic010G012900--Sobic003G383500 Sobic010G012900--Sobic006G114300 Sobic010G012900--Sobic009G098100 Sobic001G357200--Sobic001G188600 Sobic001G357200--Sobic006G114300 Sobic001G357200--Sobic010G012900 Sobic001G357200--Sobic009G001500 Sobic001G357200--Sobic008G030000 Sobic001G357200--Sobic007G034500 Sobic001G357200--Sobic008G123600 Sobic001G357200--Sobic001G069500 Sobic001G357200--Sobic003G383500 Sobic001G376700 Sobic001G376700 Sobic004G296800--Sobic001G376700 Sobic004G296800--Sobic001G543700 Sobic004G044200 Sobic004G044200 Sobic004G296800--Sobic004G044200 Sobic003G420900 Sobic003G420900 Sobic004G296800--Sobic003G420900 Sobic002G207900 Sobic002G207900 Sobic004G296800--Sobic002G207900 Sobic004G296800--Sobic007G026200 Sobic004G296800--Sobic008G123600 Sobic001G541300 Sobic001G541300 Sobic004G296800--Sobic001G541300 Sobic005G218201 Sobic005G218201 Sobic004G296800--Sobic005G218201
Octagon: transcription factors


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