Gene annotation
Transcriptome id Sobic.002G225000.1
Synonym Sb02g026560
Functional annotation remorin C-terminal domain containing protein, putative, expressed
UniProt A0A1B6QCX5
Pfam PF03763
Panther DB PTHR31471 PTHR31471:SF9
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G45207 : Remorin family protein
RAP-DB (Rice) LOC_Os09g28300.1 : remorin C-terminal domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a014056 , Zm00025a030639 , Zm00025a047245
Brachypodium KQK09606
Barley HORVU5Hr1G068200.20 , HORVU5Hr1G068200.9 , HORVU5Hr1G068200.8 , HORVU5Hr1G068200.7 , HORVU5Hr1G068200.6 , HORVU5Hr1G068200.5 , HORVU5Hr1G068200.4 , HORVU5Hr1G068200.3 , HORVU5Hr1G068200.2 , HORVU5Hr1G068200.1 , HORVU5Hr1G068200.13 , HORVU5Hr1G068200.12 , HORVU5Hr1G068200.17 , HORVU5Hr1G068200.16 , HORVU5Hr1G068200.15 , HORVU5Hr1G068200.14 , HORVU5Hr1G068200.11 , HORVU5Hr1G068200.10 , HORVU5Hr1G068200.19 , HORVU5Hr1G068200.18
Wheat TraesCS5B02G235500 , TraesCS5B02G235500 , TraesCS5A02G237300 , TraesCS5A02G237300 , TraesCS5A02G237300 , TraesCS5D02G244300 , TraesCS5D02G244300
Populus -


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cDNA sequences
Sobic.002G225000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G231100 3-deoxy-manno-octulosonate cytidylyltransferase, putative, expressed K00979: 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase)
2 Sobic.003G078300 leucine-rich repeat protein-related, putative, expressed -
3 Sobic.002G377300 CAMK_CAMK_like.35 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
4 Sobic.001G379100 basic helix-loop-helix domain containing protein, expressed -
5 Sobic.010G165100 expressed protein -
6 Sobic.003G148400 Pectinesterase 1 (Precursor)(PubMedID : 26186930)@pectinesterase, putative, expressed K01051: pectinesterase
7 Sobic.003G223000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
8 Sobic.002G388600 pectinacetylesterase domain containing protein, expressed -
9 Sobic.002G078000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@KHG/KDPG aldolase, putative, expressed -
10 Sobic.010G134500 exonuclease, putative, expressed -
11 Sobic.010G096200 expressed protein -
12 Sobic.001G371700 zinc finger protein, putative, expressed -
13 Sobic.003G333700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cysteine synthase, chloroplast precursor, putative, expressed K01738: cysteine synthase
14 Sobic.001G104300 differentiation protein, putative, expressed K09761: 16S rRNA (uracil1498-N3)-methyltransferase
15 Sobic.001G389600 expressed protein -
16 Sobic.001G164500 MYB family transcription factor, putative, expressed -
17 Sobic.009G151100 serine/threonine-protein kinase, putative, expressed -
18 Sobic.008G024300 tyrosine protein kinase domain containing protein, putative, expressed -
19 Sobic.001G013900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Ser/Thr protein phosphatase family protein, expressed -
20 Sobic.002G272400 expressed protein -


Gene co-expression network
sample Sobic002G225000 Sobic002G225000 Sobic009G231100 Sobic009G231100 Sobic002G225000--Sobic009G231100 Sobic003G078300 Sobic003G078300 Sobic002G225000--Sobic003G078300 Sobic002G377300 Sobic002G377300 Sobic002G225000--Sobic002G377300 Sobic001G379100 Sobic001G379100 Sobic002G225000--Sobic001G379100 Sobic010G165100 Sobic010G165100 Sobic002G225000--Sobic010G165100 Sobic003G148400 Sobic003G148400 Sobic002G225000--Sobic003G148400 Sobic003G223000 Sobic003G223000 Sobic002G225000--Sobic003G223000 Sobic002G388600 Sobic002G388600 Sobic002G225000--Sobic002G388600 Sobic002G078000 Sobic002G078000 Sobic002G225000--Sobic002G078000 Sobic009G201900 Sobic009G201900 Sobic009G231100--Sobic009G201900 Sobic009G231100--Sobic002G225000 Sobic009G231100--Sobic002G377300 Sobic001G518200 Sobic001G518200 Sobic009G231100--Sobic001G518200 Sobic003G420900 Sobic003G420900 Sobic009G231100--Sobic003G420900 Sobic009G231100--Sobic003G223000 Sobic005G031000 Sobic005G031000 Sobic009G231100--Sobic005G031000 Sobic001G104300 Sobic001G104300 Sobic009G231100--Sobic001G104300 Sobic005G022000 Sobic005G022000 Sobic009G231100--Sobic005G022000 Sobic002G311000 Sobic002G311000 Sobic003G078300--Sobic002G311000 Sobic004G253500 Sobic004G253500 Sobic003G078300--Sobic004G253500 Sobic001G461800 Sobic001G461800 Sobic003G078300--Sobic001G461800 Sobic001G389600 Sobic001G389600 Sobic003G078300--Sobic001G389600 Sobic006G257200 Sobic006G257200 Sobic003G078300--Sobic006G257200 Sobic003G291000 Sobic003G291000 Sobic003G078300--Sobic003G291000 Sobic002G045200 Sobic002G045200 Sobic003G078300--Sobic002G045200 Sobic003G250000 Sobic003G250000 Sobic003G078300--Sobic003G250000 Sobic002G362700 Sobic002G362700 Sobic003G078300--Sobic002G362700 Sobic009G055900 Sobic009G055900 Sobic002G377300--Sobic009G055900 Sobic001G371700 Sobic001G371700 Sobic002G377300--Sobic001G371700 Sobic002G377300--Sobic010G165100 Sobic002G142500 Sobic002G142500 Sobic002G377300--Sobic002G142500 Sobic002G377300--Sobic009G231100 Sobic001G047200 Sobic001G047200 Sobic002G377300--Sobic001G047200 Sobic008G143600 Sobic008G143600 Sobic002G377300--Sobic008G143600 Sobic002G377300--Sobic002G225000 Sobic002G246000 Sobic002G246000 Sobic002G377300--Sobic002G246000 Sobic001G164500 Sobic001G164500 Sobic001G379100--Sobic001G164500 Sobic010G096200 Sobic010G096200 Sobic001G379100--Sobic010G096200 Sobic001G379100--Sobic003G148400 Sobic002G280500 Sobic002G280500 Sobic001G379100--Sobic002G280500 Sobic001G127700 Sobic001G127700 Sobic001G379100--Sobic001G127700 Sobic006G172700 Sobic006G172700 Sobic001G379100--Sobic006G172700 Sobic001G379100--Sobic002G225000 Sobic004G060700 Sobic004G060700 Sobic001G379100--Sobic004G060700 Sobic004G109000 Sobic004G109000 Sobic001G379100--Sobic004G109000 Sobic010G165100--Sobic002G246000 Sobic010G165100--Sobic001G389600 Sobic010G165100--Sobic002G142500 Sobic010G165100--Sobic002G045200 Sobic006G274866 Sobic006G274866 Sobic010G165100--Sobic006G274866 Sobic002G403000 Sobic002G403000 Sobic010G165100--Sobic002G403000 Sobic006G032800 Sobic006G032800 Sobic010G165100--Sobic006G032800 Sobic010G165100--Sobic002G311000 Sobic004G243800 Sobic004G243800 Sobic010G165100--Sobic004G243800 Sobic003G148400--Sobic001G379100 Sobic003G148400--Sobic003G250000 Sobic003G148400--Sobic004G253500 Sobic003G148400--Sobic001G164500 Sobic003G148400--Sobic010G096200 Sobic003G148400--Sobic002G225000 Sobic003G259500 Sobic003G259500 Sobic003G148400--Sobic003G259500 Sobic009G002900 Sobic009G002900 Sobic003G148400--Sobic009G002900 Sobic008G075200 Sobic008G075200 Sobic003G148400--Sobic008G075200 Sobic003G333700 Sobic003G333700 Sobic003G223000--Sobic003G333700 Sobic003G223000--Sobic002G078000 Sobic008G101900 Sobic008G101900 Sobic003G223000--Sobic008G101900 Sobic003G223000--Sobic009G002900 Sobic009G177200 Sobic009G177200 Sobic003G223000--Sobic009G177200 Sobic003G223000--Sobic009G231100 Sobic001G165801 Sobic001G165801 Sobic003G223000--Sobic001G165801 Sobic003G223000--Sobic001G104300 Sobic002G272400 Sobic002G272400 Sobic003G223000--Sobic002G272400 Sobic002G388600--Sobic002G225000 Sobic002G428900 Sobic002G428900 Sobic002G388600--Sobic002G428900 Sobic002G388600--Sobic009G231100 Sobic002G388600--Sobic002G377300 Sobic008G166050 Sobic008G166050 Sobic002G388600--Sobic008G166050 Sobic002G388600--Sobic005G022000 Sobic003G165800 Sobic003G165800 Sobic002G388600--Sobic003G165800 Sobic007G050600 Sobic007G050600 Sobic002G388600--Sobic007G050600 Sobic010G054000 Sobic010G054000 Sobic002G388600--Sobic010G054000 Sobic001G013900 Sobic001G013900 Sobic002G078000--Sobic001G013900 Sobic002G078000--Sobic003G333700 Sobic002G078000--Sobic001G104300 Sobic002G078000--Sobic005G022000 Sobic002G078000--Sobic003G223000 Sobic002G360200 Sobic002G360200 Sobic002G078000--Sobic002G360200 Sobic001G188600 Sobic001G188600 Sobic002G078000--Sobic001G188600 Sobic010G012900 Sobic010G012900 Sobic002G078000--Sobic010G012900 Sobic002G078000--Sobic004G109000
Octagon: transcription factors


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