Gene annotation
Transcriptome id Sobic.003G078300.1
Synonym Sb03g006620
Functional annotation leucine-rich repeat protein-related, putative, expressed
UniProt C5XQP1
Pfam PF11721
Panther DB PTHR27003 PTHR27003:SF5
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G25570 : Di-glucose binding protein with Leucine-rich repeat domain
RAP-DB (Rice) LOC_Os01g04720.1 : leucine-rich repeat protein-related, putative, expressed
MaizeGDB (Corn) Zm00025a023518
Brachypodium KQK02616 , KQK02617
Barley HORVU3Hr1G010070.5 , HORVU3Hr1G010070.4 , HORVU3Hr1G010070.7 , HORVU3Hr1G010070.6 , HORVU3Hr1G010070.1 , HORVU3Hr1G010070.3 , HORVU3Hr1G010070.2
Wheat TraesCS3A02G053800 , TraesCS3A02G053800 , TraesCS3B02G064800 , TraesCS3B02G064800 , TraesCS3B02G064800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G311000 "Receptor-like kinase(Ortholog in rice:Huang et al., 2012)"(PubMedID : 31659859)@leucine-rich repeat family protein, putative, expressed -
2 Sobic.004G253500 auxin-independent growth promoter protein, putative, expressed -
3 Sobic.001G461800 zinc finger family protein, putative, expressed -
4 Sobic.001G389600 expressed protein -
5 Sobic.006G257200 kinesin motor domain containing protein, putative, expressed -
6 Sobic.003G291000 protein kinase family protein, putative, expressed -
7 Sobic.002G045200 protein kinase, putative, expressed -
8 Sobic.003G250000 peroxidase family protein, expressed K00430: peroxidase
9 Sobic.002G362700 zinc finger family protein, putative, expressed -
10 Sobic.002G142500 expressed protein -
11 Sobic.009G002900 expressed protein -
12 Sobic.003G401800 expressed protein -
13 Sobic.001G371700 zinc finger protein, putative, expressed -
14 Sobic.010G165100 expressed protein -
15 Sobic.004G164700 expressed protein -
16 Sobic.002G403000 eukaryotic aspartyl protease domain containing protein, expressed -
17 Sobic.002G225000 remorin C-terminal domain containing protein, putative, expressed -
18 Sobic.006G241800 receptor kinase, putative, expressed -
19 Sobic.007G000700 choline transporter-related, putative, expressed K15377: solute carrier family 44 (choline transporter-like protein), member 2/4/5
20 Sobic.001G074100 kinesin motor domain containing protein, putative, expressed K10401: kinesin family member 18/19


Gene co-expression network
sample Sobic003G078300 Sobic003G078300 Sobic002G311000 Sobic002G311000 Sobic003G078300--Sobic002G311000 Sobic004G253500 Sobic004G253500 Sobic003G078300--Sobic004G253500 Sobic001G461800 Sobic001G461800 Sobic003G078300--Sobic001G461800 Sobic001G389600 Sobic001G389600 Sobic003G078300--Sobic001G389600 Sobic006G257200 Sobic006G257200 Sobic003G078300--Sobic006G257200 Sobic003G291000 Sobic003G291000 Sobic003G078300--Sobic003G291000 Sobic002G045200 Sobic002G045200 Sobic003G078300--Sobic002G045200 Sobic003G250000 Sobic003G250000 Sobic003G078300--Sobic003G250000 Sobic002G362700 Sobic002G362700 Sobic003G078300--Sobic002G362700 Sobic006G241800 Sobic006G241800 Sobic002G311000--Sobic006G241800 Sobic002G311000--Sobic003G291000 Sobic002G311000--Sobic003G078300 Sobic002G142500 Sobic002G142500 Sobic002G311000--Sobic002G142500 Sobic002G311000--Sobic002G045200 Sobic010G211800 Sobic010G211800 Sobic002G311000--Sobic010G211800 Sobic001G074100 Sobic001G074100 Sobic002G311000--Sobic001G074100 Sobic010G165100 Sobic010G165100 Sobic002G311000--Sobic010G165100 Sobic002G311000--Sobic006G257200 Sobic004G253500--Sobic003G078300 Sobic004G253500--Sobic001G461800 Sobic004G253500--Sobic003G250000 Sobic003G259500 Sobic003G259500 Sobic004G253500--Sobic003G259500 Sobic008G059900 Sobic008G059900 Sobic004G253500--Sobic008G059900 Sobic003G024000 Sobic003G024000 Sobic004G253500--Sobic003G024000 Sobic009G002900 Sobic009G002900 Sobic004G253500--Sobic009G002900 Sobic001G199500 Sobic001G199500 Sobic004G253500--Sobic001G199500 Sobic003G102700 Sobic003G102700 Sobic004G253500--Sobic003G102700 Sobic001G461800--Sobic003G250000 Sobic004G164700 Sobic004G164700 Sobic001G461800--Sobic004G164700 Sobic001G461800--Sobic003G291000 Sobic002G286700 Sobic002G286700 Sobic001G461800--Sobic002G286700 Sobic008G190000 Sobic008G190000 Sobic001G461800--Sobic008G190000 Sobic001G461800--Sobic003G078300 Sobic001G461800--Sobic004G253500 Sobic001G381100 Sobic001G381100 Sobic001G461800--Sobic001G381100 Sobic001G461800--Sobic006G241800 Sobic002G403000 Sobic002G403000 Sobic001G389600--Sobic002G403000 Sobic001G389600--Sobic010G165100 Sobic001G478100 Sobic001G478100 Sobic001G389600--Sobic001G478100 Sobic001G389600--Sobic002G045200 Sobic010G107200 Sobic010G107200 Sobic001G389600--Sobic010G107200 Sobic001G389600--Sobic002G142500 Sobic002G246000 Sobic002G246000 Sobic001G389600--Sobic002G246000 Sobic002G428000 Sobic002G428000 Sobic001G389600--Sobic002G428000 Sobic006G032800 Sobic006G032800 Sobic001G389600--Sobic006G032800 Sobic006G257200--Sobic002G142500 Sobic006G257200--Sobic006G241800 Sobic006G257200--Sobic002G362700 Sobic002G293700 Sobic002G293700 Sobic006G257200--Sobic002G293700 Sobic006G257200--Sobic003G078300 Sobic001G425700 Sobic001G425700 Sobic006G257200--Sobic001G425700 Sobic002G001100 Sobic002G001100 Sobic006G257200--Sobic002G001100 Sobic006G257200--Sobic004G164700 Sobic010G135300 Sobic010G135300 Sobic006G257200--Sobic010G135300 Sobic003G291000--Sobic006G241800 Sobic003G291000--Sobic002G311000 Sobic003G291000--Sobic001G461800 Sobic003G291000--Sobic001G074100 Sobic003G291000--Sobic002G045200 Sobic003G291000--Sobic003G078300 Sobic003G291000--Sobic010G211800 Sobic002G164700 Sobic002G164700 Sobic003G291000--Sobic002G164700 Sobic003G291000--Sobic003G250000 Sobic002G045200--Sobic001G389600 Sobic002G045200--Sobic010G211800 Sobic002G045200--Sobic001G074100 Sobic002G045200--Sobic010G165100 Sobic002G045200--Sobic006G241800 Sobic001G522300 Sobic001G522300 Sobic002G045200--Sobic001G522300 Sobic002G045200--Sobic002G362700 Sobic002G045200--Sobic002G311000 Sobic002G045200--Sobic002G142500 Sobic003G250000--Sobic001G461800 Sobic003G250000--Sobic004G253500 Sobic004G269100 Sobic004G269100 Sobic003G250000--Sobic004G269100 Sobic003G250000--Sobic003G078300 Sobic003G250000--Sobic009G002900 Sobic003G250000--Sobic003G291000 Sobic003G250000--Sobic002G286700 Sobic003G250000--Sobic003G259500 Sobic002G259200 Sobic002G259200 Sobic003G250000--Sobic002G259200 Sobic003G031700 Sobic003G031700 Sobic002G362700--Sobic003G031700 Sobic002G362700--Sobic001G074100 Sobic002G362700--Sobic001G522300 Sobic002G362700--Sobic004G164700 Sobic010G241100 Sobic010G241100 Sobic002G362700--Sobic010G241100 Sobic003G032200 Sobic003G032200 Sobic002G362700--Sobic003G032200 Sobic002G362700--Sobic010G211800 Sobic003G338200 Sobic003G338200 Sobic002G362700--Sobic003G338200 Sobic002G362700--Sobic002G045200
Octagon: transcription factors


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