Gene annotation
Transcriptome id Sobic.009G002900.1
Synonym
Functional annotation expressed protein
UniProt A0A1B6P5M0
Pfam PF13456
Panther DB PTHR33033 PTHR33033:SF11
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G24090 : RNase H family protein
RAP-DB (Rice) ChrSy.fgenesh.mRNA.22 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G250000 peroxidase family protein, expressed K00430: peroxidase
2 Sobic.003G078300 leucine-rich repeat protein-related, putative, expressed -
3 Sobic.004G253500 auxin-independent growth promoter protein, putative, expressed -
4 Sobic.009G177200 glycosyl transferase, family 8, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
5 Sobic.003G223000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
6 Sobic.001G461800 zinc finger family protein, putative, expressed -
7 Sobic.008G113300 expressed protein -
8 Sobic.006G093200 PHD finger protein, putative, expressed -
9 Sobic.001G199500 heat shock protein DnaJ, putative, expressed K09531: DnaJ homolog subfamily C member 11
10 Sobic.008G181400 Fatty acid hydroxylase 1 FAH1 (Os)(PubMedID : 27208977)@fatty acid hydroxylase, putative, expressed -
11 Sobic.008G059900 2-oxo acid dehydrogenases acyltransferase domain containing protein, expressed K00627: DLAT, aceF, pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase)
12 Sobic.004G319800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@chaperonin, putative, expressed K04078: groES, chaperonin GroES
13 Sobic.003G333700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cysteine synthase, chloroplast precursor, putative, expressed K01738: cysteine synthase
14 Sobic.003G291000 protein kinase family protein, putative, expressed -
15 Sobic.003G259500 - -
16 Sobic.002G078000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@KHG/KDPG aldolase, putative, expressed -
17 Sobic.008G075200 2-dehydro-3-deoxyphosphooctonate aldolase, putative, expressed K01627: 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase)
18 Sobic.003G102700 exostosin family protein, putative, expressed -
19 Sobic.003G392100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@oligopeptidase, putative, expressed K01392: thimet oligopeptidase
20 Sobic.003G148400 Pectinesterase 1 (Precursor)(PubMedID : 26186930)@pectinesterase, putative, expressed K01051: pectinesterase


Gene co-expression network
sample Sobic009G002900 Sobic009G002900 Sobic003G250000 Sobic003G250000 Sobic009G002900--Sobic003G250000 Sobic003G078300 Sobic003G078300 Sobic009G002900--Sobic003G078300 Sobic004G253500 Sobic004G253500 Sobic009G002900--Sobic004G253500 Sobic009G177200 Sobic009G177200 Sobic009G002900--Sobic009G177200 Sobic003G223000 Sobic003G223000 Sobic009G002900--Sobic003G223000 Sobic001G461800 Sobic001G461800 Sobic009G002900--Sobic001G461800 Sobic008G113300 Sobic008G113300 Sobic009G002900--Sobic008G113300 Sobic006G093200 Sobic006G093200 Sobic009G002900--Sobic006G093200 Sobic001G199500 Sobic001G199500 Sobic009G002900--Sobic001G199500 Sobic003G250000--Sobic001G461800 Sobic003G250000--Sobic004G253500 Sobic004G269100 Sobic004G269100 Sobic003G250000--Sobic004G269100 Sobic003G250000--Sobic003G078300 Sobic003G250000--Sobic009G002900 Sobic003G291000 Sobic003G291000 Sobic003G250000--Sobic003G291000 Sobic002G286700 Sobic002G286700 Sobic003G250000--Sobic002G286700 Sobic003G259500 Sobic003G259500 Sobic003G250000--Sobic003G259500 Sobic002G259200 Sobic002G259200 Sobic003G250000--Sobic002G259200 Sobic002G311000 Sobic002G311000 Sobic003G078300--Sobic002G311000 Sobic003G078300--Sobic004G253500 Sobic003G078300--Sobic001G461800 Sobic001G389600 Sobic001G389600 Sobic003G078300--Sobic001G389600 Sobic006G257200 Sobic006G257200 Sobic003G078300--Sobic006G257200 Sobic003G078300--Sobic003G291000 Sobic002G045200 Sobic002G045200 Sobic003G078300--Sobic002G045200 Sobic003G078300--Sobic003G250000 Sobic002G362700 Sobic002G362700 Sobic003G078300--Sobic002G362700 Sobic004G253500--Sobic003G078300 Sobic004G253500--Sobic001G461800 Sobic004G253500--Sobic003G250000 Sobic004G253500--Sobic003G259500 Sobic008G059900 Sobic008G059900 Sobic004G253500--Sobic008G059900 Sobic003G024000 Sobic003G024000 Sobic004G253500--Sobic003G024000 Sobic004G253500--Sobic009G002900 Sobic004G253500--Sobic001G199500 Sobic003G102700 Sobic003G102700 Sobic004G253500--Sobic003G102700 Sobic001G537400 Sobic001G537400 Sobic009G177200--Sobic001G537400 Sobic009G177200--Sobic009G002900 Sobic009G177200--Sobic001G199500 Sobic001G395200 Sobic001G395200 Sobic009G177200--Sobic001G395200 Sobic009G177200--Sobic008G113300 Sobic008G045000 Sobic008G045000 Sobic009G177200--Sobic008G045000 Sobic009G177200--Sobic003G223000 Sobic006G140400 Sobic006G140400 Sobic009G177200--Sobic006G140400 Sobic001G425700 Sobic001G425700 Sobic009G177200--Sobic001G425700 Sobic003G333700 Sobic003G333700 Sobic003G223000--Sobic003G333700 Sobic002G078000 Sobic002G078000 Sobic003G223000--Sobic002G078000 Sobic008G101900 Sobic008G101900 Sobic003G223000--Sobic008G101900 Sobic003G223000--Sobic009G002900 Sobic003G223000--Sobic009G177200 Sobic009G231100 Sobic009G231100 Sobic003G223000--Sobic009G231100 Sobic001G165801 Sobic001G165801 Sobic003G223000--Sobic001G165801 Sobic001G104300 Sobic001G104300 Sobic003G223000--Sobic001G104300 Sobic002G272400 Sobic002G272400 Sobic003G223000--Sobic002G272400 Sobic001G461800--Sobic003G250000 Sobic004G164700 Sobic004G164700 Sobic001G461800--Sobic004G164700 Sobic001G461800--Sobic003G291000 Sobic001G461800--Sobic002G286700 Sobic008G190000 Sobic008G190000 Sobic001G461800--Sobic008G190000 Sobic001G461800--Sobic003G078300 Sobic001G461800--Sobic004G253500 Sobic001G381100 Sobic001G381100 Sobic001G461800--Sobic001G381100 Sobic006G241800 Sobic006G241800 Sobic001G461800--Sobic006G241800 Sobic007G006800 Sobic007G006800 Sobic008G113300--Sobic007G006800 Sobic006G281900 Sobic006G281900 Sobic008G113300--Sobic006G281900 Sobic008G113300--Sobic004G164700 Sobic008G113300--Sobic006G241800 Sobic003G351900 Sobic003G351900 Sobic008G113300--Sobic003G351900 Sobic008G113300--Sobic001G425700 Sobic005G163400 Sobic005G163400 Sobic008G113300--Sobic005G163400 Sobic003G153900 Sobic003G153900 Sobic008G113300--Sobic003G153900 Sobic008G113300--Sobic009G177200 Sobic003G019900 Sobic003G019900 Sobic006G093200--Sobic003G019900 Sobic010G092400 Sobic010G092400 Sobic006G093200--Sobic010G092400 Sobic008G070700 Sobic008G070700 Sobic006G093200--Sobic008G070700 Sobic010G024000 Sobic010G024000 Sobic006G093200--Sobic010G024000 Sobic006G274200 Sobic006G274200 Sobic006G093200--Sobic006G274200 Sobic003G032200 Sobic003G032200 Sobic006G093200--Sobic003G032200 Sobic010G269700 Sobic010G269700 Sobic006G093200--Sobic010G269700 Sobic001G074000 Sobic001G074000 Sobic006G093200--Sobic001G074000 Sobic010G222800 Sobic010G222800 Sobic006G093200--Sobic010G222800 Sobic005G088900 Sobic005G088900 Sobic001G199500--Sobic005G088900 Sobic001G199500--Sobic003G102700 Sobic006G084300 Sobic006G084300 Sobic001G199500--Sobic006G084300 Sobic001G199500--Sobic003G024000 Sobic001G199500--Sobic006G281900 Sobic009G188900 Sobic009G188900 Sobic001G199500--Sobic009G188900 Sobic001G199500--Sobic007G006800 Sobic006G071628 Sobic006G071628 Sobic001G199500--Sobic006G071628 Sobic003G144000 Sobic003G144000 Sobic001G199500--Sobic003G144000
Octagon: transcription factors


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