Gene annotation
Transcriptome id Sobic.008G059900.2
Synonym EMB3003, Sb08g005050
Functional annotation 2-oxo acid dehydrogenases acyltransferase domain containing protein, expressed
UniProt A0A1Z5R4Y7
Pfam PF00198 PF00364 PF02817
Panther DB PTHR23151:SF61 PTHR23151
NCBI CDD KOG0557; Dihydrolipoamide acetyltransferase
KEGG Orthology K00627; DLAT, aceF, pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase)
Gene Ontology GO:0008152; metabolic process GO:0016746transferase activity, transferring acyl groups


Orthologs (automatic annotation)
TAIR AT1G34430 : 2-oxoacid dehydrogenases acyltransferase family protein
RAP-DB (Rice) LOC_Os12g08170.1 : 2-oxo acid dehydrogenases acyltransferase domain containing protein, expressed
MaizeGDB (Corn) Zm00025a054088 , Zm00025a025701 , Zm00025a031110 , Zm00025a005973
Brachypodium KQJ91987 , KQJ90180 , KQJ90179 , KQJ98373
Barley HORVU5Hr1G038070.2 , HORVU5Hr1G112850.10 , HORVU5Hr1G112850.1 , HORVU5Hr1G112850.2 , HORVU5Hr1G112850.3 , HORVU5Hr1G112850.4 , HORVU5Hr1G112850.5 , HORVU5Hr1G112850.6 , HORVU5Hr1G112850.7 , HORVU5Hr1G112850.8 , HORVU5Hr1G112850.9 , HORVU5Hr1G061140.3 , HORVU5Hr1G061140.2 , HORVU5Hr1G061140.1 , HORVU5Hr1G038090.3 , HORVU5Hr1G038090.2 , HORVU5Hr1G038090.1
Wheat TraesCS5A02G119600 , TraesCS5A02G476700 , TraesCS5B02G116300 , TraesCS5A02G206600 , TraesCS5D02G490000 , TraesCS5D02G126000 , TraesCS5B02G489600 , TraesCS5A02G206600
Populus -


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cDNA sequences
Sobic.008G059900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G197200 peroxiredoxin, putative, expressed -
2 Sobic.005G031000 FAD-binding and arabino-lactone oxidase domains containing protein, putative, expressed K00225: L-galactono-1,4-lactone dehydrogenase
3 Sobic.001G199500 heat shock protein DnaJ, putative, expressed K09531: DnaJ homolog subfamily C member 11
4 Sobic.004G253500 auxin-independent growth promoter protein, putative, expressed -
5 Sobic.010G073500 3-oxoacyl-synthase, putative, expressed K09458: fabF, OXSM, 3-oxoacyl-[acyl-carrier-protein] synthase II
6 Sobic.003G102700 exostosin family protein, putative, expressed -
7 Sobic.006G071628 - -
8 Sobic.006G237000 3-oxoacyl-synthase III, chloroplast precursor, putative, expressed K00648: 3-oxoacyl-[acyl-carrier-protein] synthase III
9 Sobic.003G392100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@oligopeptidase, putative, expressed K01392: thimet oligopeptidase
10 Sobic.002G317600 endoribonuclease, putative, expressed -
11 Sobic.001G530100 hydroxymethylglutaryl-CoA synthase, putative, expressed K01641: hydroxymethylglutaryl-CoA synthase
12 Sobic.001G200200 tetratricopeptide repeat, putative, expressed -
13 Sobic.006G127200 kelch repeat protein, putative, expressed -
14 Sobic.007G173000 transmembrane 9 superfamily member, putative, expressed K17086: transmembrane 9 superfamily member 2/4
15 Sobic.009G195700 hydrolase, alpha/beta fold family domain containing protein, expressed K01259: proline iminopeptidase
16 Sobic.009G188900 acyltransferase, putative, expressed K13513: LCLAT1, lysocardiolipin and lysophospholipid acyltransferase
17 Sobic.002G426100 aldehyde dehydrogenase, putative, expressed -
18 Sobic.007G079600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@FabA-like domain containing protein, expressed K02372: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase
19 Sobic.001G537400 MYB family transcription factor, putative, expressed -
20 Sobic.009G002900 expressed protein -


Gene co-expression network
sample Sobic008G059900 Sobic008G059900 Sobic010G197200 Sobic010G197200 Sobic008G059900--Sobic010G197200 Sobic005G031000 Sobic005G031000 Sobic008G059900--Sobic005G031000 Sobic001G199500 Sobic001G199500 Sobic008G059900--Sobic001G199500 Sobic004G253500 Sobic004G253500 Sobic008G059900--Sobic004G253500 Sobic010G073500 Sobic010G073500 Sobic008G059900--Sobic010G073500 Sobic003G102700 Sobic003G102700 Sobic008G059900--Sobic003G102700 Sobic006G071628 Sobic006G071628 Sobic008G059900--Sobic006G071628 Sobic006G237000 Sobic006G237000 Sobic008G059900--Sobic006G237000 Sobic003G392100 Sobic003G392100 Sobic008G059900--Sobic003G392100 Sobic010G197200--Sobic008G059900 Sobic001G530100 Sobic001G530100 Sobic010G197200--Sobic001G530100 Sobic001G167500 Sobic001G167500 Sobic010G197200--Sobic001G167500 Sobic009G081800 Sobic009G081800 Sobic010G197200--Sobic009G081800 Sobic006G127200 Sobic006G127200 Sobic010G197200--Sobic006G127200 Sobic010G197200--Sobic005G031000 Sobic002G426100 Sobic002G426100 Sobic010G197200--Sobic002G426100 Sobic002G125800 Sobic002G125800 Sobic010G197200--Sobic002G125800 Sobic006G126800 Sobic006G126800 Sobic010G197200--Sobic006G126800 Sobic004G356200 Sobic004G356200 Sobic005G031000--Sobic004G356200 Sobic001G200200 Sobic001G200200 Sobic005G031000--Sobic001G200200 Sobic005G031000--Sobic008G059900 Sobic005G031000--Sobic002G125800 Sobic001G434700 Sobic001G434700 Sobic005G031000--Sobic001G434700 Sobic005G031000--Sobic006G237000 Sobic001G533100 Sobic001G533100 Sobic005G031000--Sobic001G533100 Sobic004G037200 Sobic004G037200 Sobic005G031000--Sobic004G037200 Sobic010G155600 Sobic010G155600 Sobic005G031000--Sobic010G155600 Sobic005G088900 Sobic005G088900 Sobic001G199500--Sobic005G088900 Sobic001G199500--Sobic003G102700 Sobic006G084300 Sobic006G084300 Sobic001G199500--Sobic006G084300 Sobic003G024000 Sobic003G024000 Sobic001G199500--Sobic003G024000 Sobic006G281900 Sobic006G281900 Sobic001G199500--Sobic006G281900 Sobic009G188900 Sobic009G188900 Sobic001G199500--Sobic009G188900 Sobic007G006800 Sobic007G006800 Sobic001G199500--Sobic007G006800 Sobic001G199500--Sobic006G071628 Sobic003G144000 Sobic003G144000 Sobic001G199500--Sobic003G144000 Sobic003G078300 Sobic003G078300 Sobic004G253500--Sobic003G078300 Sobic001G461800 Sobic001G461800 Sobic004G253500--Sobic001G461800 Sobic003G250000 Sobic003G250000 Sobic004G253500--Sobic003G250000 Sobic003G259500 Sobic003G259500 Sobic004G253500--Sobic003G259500 Sobic004G253500--Sobic008G059900 Sobic004G253500--Sobic003G024000 Sobic009G002900 Sobic009G002900 Sobic004G253500--Sobic009G002900 Sobic004G253500--Sobic001G199500 Sobic004G253500--Sobic003G102700 Sobic010G073500--Sobic008G059900 Sobic002G264300 Sobic002G264300 Sobic010G073500--Sobic002G264300 Sobic010G073500--Sobic006G237000 Sobic009G195700 Sobic009G195700 Sobic010G073500--Sobic009G195700 Sobic010G073500--Sobic005G031000 Sobic006G029400 Sobic006G029400 Sobic010G073500--Sobic006G029400 Sobic010G073500--Sobic002G125800 Sobic010G073500--Sobic001G200200 Sobic010G073500--Sobic001G199500 Sobic003G102700--Sobic001G199500 Sobic005G102800 Sobic005G102800 Sobic003G102700--Sobic005G102800 Sobic003G102700--Sobic006G084300 Sobic002G187600 Sobic002G187600 Sobic003G102700--Sobic002G187600 Sobic002G168000 Sobic002G168000 Sobic003G102700--Sobic002G168000 Sobic003G102700--Sobic006G281900 Sobic003G102700--Sobic003G024000 Sobic003G102700--Sobic009G188900 Sobic002G367200 Sobic002G367200 Sobic003G102700--Sobic002G367200 Sobic009G052100 Sobic009G052100 Sobic006G071628--Sobic009G052100 Sobic001G051300 Sobic001G051300 Sobic006G071628--Sobic001G051300 Sobic006G071628--Sobic006G084300 Sobic007G173000 Sobic007G173000 Sobic006G071628--Sobic007G173000 Sobic010G250800 Sobic010G250800 Sobic006G071628--Sobic010G250800 Sobic006G071628--Sobic001G199500 Sobic004G156200 Sobic004G156200 Sobic006G071628--Sobic004G156200 Sobic001G507200 Sobic001G507200 Sobic006G071628--Sobic001G507200 Sobic001G296800 Sobic001G296800 Sobic006G071628--Sobic001G296800 Sobic006G237000--Sobic002G125800 Sobic006G237000--Sobic005G031000 Sobic006G237000--Sobic001G200200 Sobic006G237000--Sobic010G155600 Sobic010G003900 Sobic010G003900 Sobic006G237000--Sobic010G003900 Sobic002G155100 Sobic002G155100 Sobic006G237000--Sobic002G155100 Sobic006G237000--Sobic008G059900 Sobic005G098800 Sobic005G098800 Sobic006G237000--Sobic005G098800 Sobic001G537500 Sobic001G537500 Sobic006G237000--Sobic001G537500 Sobic003G392100--Sobic006G127200 Sobic003G392100--Sobic002G426100 Sobic002G095300 Sobic002G095300 Sobic003G392100--Sobic002G095300 Sobic002G123600 Sobic002G123600 Sobic003G392100--Sobic002G123600 Sobic003G392100--Sobic003G144000 Sobic003G392100--Sobic001G199500 Sobic009G120400 Sobic009G120400 Sobic003G392100--Sobic009G120400 Sobic010G143600 Sobic010G143600 Sobic003G392100--Sobic010G143600 Sobic003G204100 Sobic003G204100 Sobic003G392100--Sobic003G204100
Octagon: transcription factors


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