Gene annotation
Transcriptome id Sobic.004G253500.1,Sobic.004G253500.2
Synonym Sb04g029280
Functional annotation auxin-independent growth promoter protein, putative, expressed
UniProt A0A1Z5RPW8 , A0A1Z5RP16
Pfam PF10250
Panther DB PTHR31741 PTHR31741:SF9
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G15740 : O-fucosyltransferase family protein
RAP-DB (Rice) LOC_Os02g49460.1 : auxin-independent growth promoter protein, putative, expressed
MaizeGDB (Corn) Zm00025a050490 , Zm00025a042742 , Zm00025a021886
Brachypodium PNT69483 , PNT69482 , KQK01514 , KQK01515 , KQK01516
Barley HORVU6Hr1G072260.30 , HORVU4Hr1G051230.13 , HORVU4Hr1G051230.12 , HORVU4Hr1G051230.10 , HORVU6Hr1G072260.3 , HORVU6Hr1G072260.9 , HORVU6Hr1G072260.8 , HORVU5Hr1G070810.6 , HORVU5Hr1G070810.5 , HORVU5Hr1G070810.1 , HORVU4Hr1G051230.11 , HORVU6Hr1G072260.20 , HORVU6Hr1G072260.21 , HORVU6Hr1G072260.22 , HORVU6Hr1G072260.23 , HORVU6Hr1G072260.24 , HORVU6Hr1G072260.25 , HORVU6Hr1G072260.26 , HORVU6Hr1G072260.27 , HORVU6Hr1G072260.28 , HORVU4Hr1G051230.6 , HORVU4Hr1G051230.5 , HORVU4Hr1G051230.4 , HORVU4Hr1G051230.2 , HORVU4Hr1G051230.1 , HORVU4Hr1G051230.9 , HORVU5Hr1G070810.14 , HORVU5Hr1G070810.13 , HORVU5Hr1G070810.12 , HORVU5Hr1G070810.11 , HORVU5Hr1G070810.10 , HORVU5Hr1G070810.9 , HORVU5Hr1G070810.8 , HORVU5Hr1G070810.7 , HORVU5Hr1G070810.4 , HORVU5Hr1G070810.3 , HORVU5Hr1G070810.2 , HORVU7Hr1G043230.9 , HORVU7Hr1G043230.8 , HORVU7Hr1G043230.3 , HORVU7Hr1G043230.1 , HORVU6Hr1G072260.15 , HORVU6Hr1G072260.14 , HORVU6Hr1G072260.17 , HORVU6Hr1G072260.16 , HORVU6Hr1G072260.11 , HORVU6Hr1G072260.13 , HORVU6Hr1G072260.19 , HORVU6Hr1G072260.18 , HORVU7Hr1G043230.15 , HORVU7Hr1G043230.14 , HORVU7Hr1G043230.13 , HORVU7Hr1G043230.12 , HORVU7Hr1G043230.11 , HORVU7Hr1G043230.10 , HORVU6Hr1G072260.1 , HORVU6Hr1G072260.4 , HORVU4Hr1G051230.8
Wheat TraesCS5A02G251600 , TraesCS5A02G251600 , TraesCS5A02G251600 , TraesCS5B02G249700 , TraesCS5B02G249700 , TraesCS6D02G268600 , TraesCS7A02G213300 , TraesCS3A02G095200 , TraesCS3A02G095200 , TraesCS7D02G215200 , TraesCS5D02G259500 , TraesCS7B02G120300 , TraesCS3D02G095400 , TraesCS6B02G317300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G078300 leucine-rich repeat protein-related, putative, expressed -
2 Sobic.001G461800 zinc finger family protein, putative, expressed -
3 Sobic.003G250000 peroxidase family protein, expressed K00430: peroxidase
4 Sobic.003G259500 - -
5 Sobic.008G059900 2-oxo acid dehydrogenases acyltransferase domain containing protein, expressed K00627: DLAT, aceF, pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase)
6 Sobic.003G024000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peptide-N4-asparagine amidase A, putative, expressed -
7 Sobic.009G002900 expressed protein -
8 Sobic.001G199500 heat shock protein DnaJ, putative, expressed K09531: DnaJ homolog subfamily C member 11
9 Sobic.003G102700 exostosin family protein, putative, expressed -
10 Sobic.002G311000 "Receptor-like kinase(Ortholog in rice:Huang et al., 2012)"(PubMedID : 31659859)@leucine-rich repeat family protein, putative, expressed -
11 Sobic.001G074100 kinesin motor domain containing protein, putative, expressed K10401: kinesin family member 18/19
12 Sobic.003G148400 Pectinesterase 1 (Precursor)(PubMedID : 26186930)@pectinesterase, putative, expressed K01051: pectinesterase
13 Sobic.004G164700 expressed protein -
14 Sobic.001G425700 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed -
15 Sobic.006G257200 kinesin motor domain containing protein, putative, expressed -
16 Sobic.003G291000 protein kinase family protein, putative, expressed -
17 Sobic.003G401800 expressed protein -
18 Sobic.006G084300 kinesin motor domain containing protein, putative, expressed K11498: centromeric protein E
19 Sobic.006G071628 - -
20 Sobic.004G243800 HEAT repeat family protein, putative, expressed -


Gene co-expression network
sample Sobic004G253500 Sobic004G253500 Sobic003G078300 Sobic003G078300 Sobic004G253500--Sobic003G078300 Sobic001G461800 Sobic001G461800 Sobic004G253500--Sobic001G461800 Sobic003G250000 Sobic003G250000 Sobic004G253500--Sobic003G250000 Sobic003G259500 Sobic003G259500 Sobic004G253500--Sobic003G259500 Sobic008G059900 Sobic008G059900 Sobic004G253500--Sobic008G059900 Sobic003G024000 Sobic003G024000 Sobic004G253500--Sobic003G024000 Sobic009G002900 Sobic009G002900 Sobic004G253500--Sobic009G002900 Sobic001G199500 Sobic001G199500 Sobic004G253500--Sobic001G199500 Sobic003G102700 Sobic003G102700 Sobic004G253500--Sobic003G102700 Sobic002G311000 Sobic002G311000 Sobic003G078300--Sobic002G311000 Sobic003G078300--Sobic004G253500 Sobic003G078300--Sobic001G461800 Sobic001G389600 Sobic001G389600 Sobic003G078300--Sobic001G389600 Sobic006G257200 Sobic006G257200 Sobic003G078300--Sobic006G257200 Sobic003G291000 Sobic003G291000 Sobic003G078300--Sobic003G291000 Sobic002G045200 Sobic002G045200 Sobic003G078300--Sobic002G045200 Sobic003G078300--Sobic003G250000 Sobic002G362700 Sobic002G362700 Sobic003G078300--Sobic002G362700 Sobic001G461800--Sobic003G250000 Sobic004G164700 Sobic004G164700 Sobic001G461800--Sobic004G164700 Sobic001G461800--Sobic003G291000 Sobic002G286700 Sobic002G286700 Sobic001G461800--Sobic002G286700 Sobic008G190000 Sobic008G190000 Sobic001G461800--Sobic008G190000 Sobic001G461800--Sobic003G078300 Sobic001G461800--Sobic004G253500 Sobic001G381100 Sobic001G381100 Sobic001G461800--Sobic001G381100 Sobic006G241800 Sobic006G241800 Sobic001G461800--Sobic006G241800 Sobic003G250000--Sobic001G461800 Sobic003G250000--Sobic004G253500 Sobic004G269100 Sobic004G269100 Sobic003G250000--Sobic004G269100 Sobic003G250000--Sobic003G078300 Sobic003G250000--Sobic009G002900 Sobic003G250000--Sobic003G291000 Sobic003G250000--Sobic002G286700 Sobic003G250000--Sobic003G259500 Sobic002G259200 Sobic002G259200 Sobic003G250000--Sobic002G259200 Sobic003G259500--Sobic004G253500 Sobic003G259500--Sobic003G250000 Sobic003G259500--Sobic003G078300 Sobic003G333700 Sobic003G333700 Sobic003G259500--Sobic003G333700 Sobic003G259500--Sobic009G002900 Sobic007G079600 Sobic007G079600 Sobic003G259500--Sobic007G079600 Sobic003G148400 Sobic003G148400 Sobic003G259500--Sobic003G148400 Sobic003G259500--Sobic001G461800 Sobic002G078000 Sobic002G078000 Sobic003G259500--Sobic002G078000 Sobic010G197200 Sobic010G197200 Sobic008G059900--Sobic010G197200 Sobic005G031000 Sobic005G031000 Sobic008G059900--Sobic005G031000 Sobic008G059900--Sobic001G199500 Sobic008G059900--Sobic004G253500 Sobic010G073500 Sobic010G073500 Sobic008G059900--Sobic010G073500 Sobic008G059900--Sobic003G102700 Sobic006G071628 Sobic006G071628 Sobic008G059900--Sobic006G071628 Sobic006G237000 Sobic006G237000 Sobic008G059900--Sobic006G237000 Sobic003G392100 Sobic003G392100 Sobic008G059900--Sobic003G392100 Sobic001G425700 Sobic001G425700 Sobic003G024000--Sobic001G425700 Sobic003G024000--Sobic001G199500 Sobic006G281900 Sobic006G281900 Sobic003G024000--Sobic006G281900 Sobic003G226700 Sobic003G226700 Sobic003G024000--Sobic003G226700 Sobic001G054700 Sobic001G054700 Sobic003G024000--Sobic001G054700 Sobic003G420300 Sobic003G420300 Sobic003G024000--Sobic003G420300 Sobic006G084300 Sobic006G084300 Sobic003G024000--Sobic006G084300 Sobic008G083500 Sobic008G083500 Sobic003G024000--Sobic008G083500 Sobic003G292700 Sobic003G292700 Sobic003G024000--Sobic003G292700 Sobic009G002900--Sobic003G250000 Sobic009G002900--Sobic003G078300 Sobic009G002900--Sobic004G253500 Sobic009G177200 Sobic009G177200 Sobic009G002900--Sobic009G177200 Sobic003G223000 Sobic003G223000 Sobic009G002900--Sobic003G223000 Sobic009G002900--Sobic001G461800 Sobic008G113300 Sobic008G113300 Sobic009G002900--Sobic008G113300 Sobic006G093200 Sobic006G093200 Sobic009G002900--Sobic006G093200 Sobic009G002900--Sobic001G199500 Sobic005G088900 Sobic005G088900 Sobic001G199500--Sobic005G088900 Sobic001G199500--Sobic003G102700 Sobic001G199500--Sobic006G084300 Sobic001G199500--Sobic003G024000 Sobic001G199500--Sobic006G281900 Sobic009G188900 Sobic009G188900 Sobic001G199500--Sobic009G188900 Sobic007G006800 Sobic007G006800 Sobic001G199500--Sobic007G006800 Sobic001G199500--Sobic006G071628 Sobic003G144000 Sobic003G144000 Sobic001G199500--Sobic003G144000 Sobic003G102700--Sobic001G199500 Sobic005G102800 Sobic005G102800 Sobic003G102700--Sobic005G102800 Sobic003G102700--Sobic006G084300 Sobic002G187600 Sobic002G187600 Sobic003G102700--Sobic002G187600 Sobic002G168000 Sobic002G168000 Sobic003G102700--Sobic002G168000 Sobic003G102700--Sobic006G281900 Sobic003G102700--Sobic003G024000 Sobic003G102700--Sobic009G188900 Sobic002G367200 Sobic002G367200 Sobic003G102700--Sobic002G367200
Octagon: transcription factors


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