Gene annotation
Transcriptome id Sobic.002G426100.1
Synonym ALDH22A1, Sb02g043660
Functional annotation aldehyde dehydrogenase, putative, expressed
UniProt C5X6C7
Pfam PF00171
Panther DB PTHR11699 PTHR11699:SF25
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016491; oxidoreductase activity GO:0008152metabolic process


Orthologs (automatic annotation)
TAIR AT3G66658 : aldehyde dehydrogenase 22A1
RAP-DB (Rice) LOC_Os07g48920.1 : aldehyde dehydrogenase, putative, expressed
MaizeGDB (Corn) Zm00025a049229
Brachypodium KQK14536 , KQK14537 , PNT74538
Barley HORVU2Hr1G016040.7 , HORVU2Hr1G016040.6 , HORVU2Hr1G016040.5 , HORVU2Hr1G016040.4 , HORVU2Hr1G016040.3 , HORVU2Hr1G016040.2 , HORVU2Hr1G016040.1 , HORVU2Hr1G016040.9 , HORVU2Hr1G016040.8 , HORVU2Hr1G016040.12 , HORVU2Hr1G016040.11 , HORVU2Hr1G016040.10
Wheat TraesCS2A02G096000 , TraesCS2D02G094400 , TraesCS2B02G111400 , TraesCS2B02G111400
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G120400 methyltransferase, putative, expressed -
2 Sobic.008G111600 heat shock protein, putative, expressed K09487: HSP90B, heat shock protein 90kDa beta
3 Sobic.006G181800 gamma-tubulin complex component 6, putative, expressed K16573: TUBGCP6, gamma-tubulin complex component 6
4 Sobic.002G078100 PPR repeat domain containing protein, putative, expressed -
5 Sobic.002G043000 HEN1, putative, expressed -
6 Sobic.006G017800 ELM2 domain containing protein, putative, expressed -
7 Sobic.002G066800 RNA ligase isoform 1, putative, expressed -
8 Sobic.007G186400 resistance protein, putative, expressed -
9 Sobic.004G129500 expressed protein -
10 Sobic.002G173400 expressed protein -
11 Sobic.002G362200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MSH-like DNA mismatch repair protein, putative, expressed K08735: DNA mismatch repair protein MSH2
12 Sobic.006G126800 expressed protein K10730: ATP-dependent DNA helicase Q4
13 Sobic.010G269800 Phosphatidylinositol kinase and FAT containing domain protein, putative, expressed K06640: serine/threonine-protein kinase ATR
14 Sobic.003G194800 EF hand family protein, putative, expressed -
15 Sobic.001G097900 expressed protein -
16 Sobic.004G215600 - K15271: HFM1, ATP-dependent DNA helicase HFM1/MER3
17 Sobic.004G000400 OsPDIL1-4 protein disulfide isomerase PDIL1-4, expressed K09580: PDIA1, protein disulfide-isomerase A1
18 Sobic.009G052100 tubulin/FtsZ domain containing protein, putative, expressed K10389: tubulin gamma
19 Sobic.003G392100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@oligopeptidase, putative, expressed K01392: thimet oligopeptidase
20 Sobic.006G106600 arsenical pump-driving ATPase, putative, expressed K01551: arsA, ASNA1, arsenite/tail-anchored protein-transporting ATPase


Gene co-expression network
sample Sobic002G426100 Sobic002G426100 Sobic009G120400 Sobic009G120400 Sobic002G426100--Sobic009G120400 Sobic008G111600 Sobic008G111600 Sobic002G426100--Sobic008G111600 Sobic006G181800 Sobic006G181800 Sobic002G426100--Sobic006G181800 Sobic002G078100 Sobic002G078100 Sobic002G426100--Sobic002G078100 Sobic002G043000 Sobic002G043000 Sobic002G426100--Sobic002G043000 Sobic006G017800 Sobic006G017800 Sobic002G426100--Sobic006G017800 Sobic002G066800 Sobic002G066800 Sobic002G426100--Sobic002G066800 Sobic007G186400 Sobic007G186400 Sobic002G426100--Sobic007G186400 Sobic004G129500 Sobic004G129500 Sobic002G426100--Sobic004G129500 Sobic002G173400 Sobic002G173400 Sobic009G120400--Sobic002G173400 Sobic009G120400--Sobic002G426100 Sobic007G034200 Sobic007G034200 Sobic009G120400--Sobic007G034200 Sobic003G194800 Sobic003G194800 Sobic009G120400--Sobic003G194800 Sobic004G215600 Sobic004G215600 Sobic009G120400--Sobic004G215600 Sobic007G105700 Sobic007G105700 Sobic009G120400--Sobic007G105700 Sobic003G299500 Sobic003G299500 Sobic009G120400--Sobic003G299500 Sobic009G120400--Sobic007G186400 Sobic001G051400 Sobic001G051400 Sobic009G120400--Sobic001G051400 Sobic008G111600--Sobic002G426100 Sobic008G111600--Sobic006G181800 Sobic002G362200 Sobic002G362200 Sobic008G111600--Sobic002G362200 Sobic004G215900 Sobic004G215900 Sobic008G111600--Sobic004G215900 Sobic008G111600--Sobic002G043000 Sobic001G024000 Sobic001G024000 Sobic008G111600--Sobic001G024000 Sobic008G111600--Sobic002G078100 Sobic002G003300 Sobic002G003300 Sobic008G111600--Sobic002G003300 Sobic003G144000 Sobic003G144000 Sobic008G111600--Sobic003G144000 Sobic006G181800--Sobic008G111600 Sobic004G038100 Sobic004G038100 Sobic006G181800--Sobic004G038100 Sobic006G181800--Sobic002G426100 Sobic006G033101 Sobic006G033101 Sobic006G181800--Sobic006G033101 Sobic002G371600 Sobic002G371600 Sobic006G181800--Sobic002G371600 Sobic006G181800--Sobic002G043000 Sobic008G092800 Sobic008G092800 Sobic006G181800--Sobic008G092800 Sobic006G236000 Sobic006G236000 Sobic006G181800--Sobic006G236000 Sobic010G188000 Sobic010G188000 Sobic006G181800--Sobic010G188000 Sobic002G078100--Sobic002G066800 Sobic002G078100--Sobic002G426100 Sobic002G078100--Sobic009G120400 Sobic008G047500 Sobic008G047500 Sobic002G078100--Sobic008G047500 Sobic006G191200 Sobic006G191200 Sobic002G078100--Sobic006G191200 Sobic002G078100--Sobic001G051400 Sobic002G078100--Sobic008G111600 Sobic002G078100--Sobic003G194800 Sobic002G078100--Sobic007G034200 Sobic002G043000--Sobic008G111600 Sobic002G043000--Sobic004G215900 Sobic002G043000--Sobic002G426100 Sobic002G043000--Sobic006G236000 Sobic008G068100 Sobic008G068100 Sobic002G043000--Sobic008G068100 Sobic002G043000--Sobic006G181800 Sobic002G043000--Sobic004G038100 Sobic006G280100 Sobic006G280100 Sobic002G043000--Sobic006G280100 Sobic002G043000--Sobic004G129500 Sobic006G017800--Sobic002G426100 Sobic003G166500 Sobic003G166500 Sobic006G017800--Sobic003G166500 Sobic007G122700 Sobic007G122700 Sobic006G017800--Sobic007G122700 Sobic006G017800--Sobic008G111600 Sobic003G427200 Sobic003G427200 Sobic006G017800--Sobic003G427200 Sobic001G097900 Sobic001G097900 Sobic006G017800--Sobic001G097900 Sobic003G256800 Sobic003G256800 Sobic006G017800--Sobic003G256800 Sobic006G017800--Sobic002G078100 Sobic006G017800--Sobic009G120400 Sobic002G066800--Sobic001G051400 Sobic005G087300 Sobic005G087300 Sobic002G066800--Sobic005G087300 Sobic002G066800--Sobic002G078100 Sobic003G393200 Sobic003G393200 Sobic002G066800--Sobic003G393200 Sobic010G038900 Sobic010G038900 Sobic002G066800--Sobic010G038900 Sobic010G018900 Sobic010G018900 Sobic002G066800--Sobic010G018900 Sobic003G010900 Sobic003G010900 Sobic002G066800--Sobic003G010900 Sobic002G066800--Sobic006G191200 Sobic003G023200 Sobic003G023200 Sobic002G066800--Sobic003G023200 Sobic007G186400--Sobic009G120400 Sobic007G186400--Sobic004G215600 Sobic002G308000 Sobic002G308000 Sobic007G186400--Sobic002G308000 Sobic004G000400 Sobic004G000400 Sobic007G186400--Sobic004G000400 Sobic007G186400--Sobic008G047500 Sobic007G186400--Sobic002G173400 Sobic006G106600 Sobic006G106600 Sobic007G186400--Sobic006G106600 Sobic007G186400--Sobic002G426100 Sobic007G186400--Sobic007G105700 Sobic007G036800 Sobic007G036800 Sobic004G129500--Sobic007G036800 Sobic010G103500 Sobic010G103500 Sobic004G129500--Sobic010G103500 Sobic001G296800 Sobic001G296800 Sobic004G129500--Sobic001G296800 Sobic003G028400 Sobic003G028400 Sobic004G129500--Sobic003G028400 Sobic003G411700 Sobic003G411700 Sobic004G129500--Sobic003G411700 Sobic004G129500--Sobic002G426100 Sobic002G123600 Sobic002G123600 Sobic004G129500--Sobic002G123600 Sobic004G129500--Sobic002G043000 Sobic001G361200 Sobic001G361200 Sobic004G129500--Sobic001G361200
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.