Gene annotation
Transcriptome id Sobic.004G129500.2,Sobic.004G129500.3
Synonym Sb04g011220
Functional annotation expressed protein
UniProt C5Y070
Pfam PF12937
Panther DB PTHR32133 PTHR32133:SF149
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os02g18720.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G036800 xylosyltransferase, putative, expressed -
2 Sobic.010G103500 ATMAP70 protein, putative, expressed -
3 Sobic.001G296800 WD repeat-containing protein 8, putative, expressed -
4 Sobic.003G028400 OsFBX234 - F-box domain containing protein, expressed -
5 Sobic.003G411700 heat shock protein DnaJ, putative, expressed -
6 Sobic.002G426100 aldehyde dehydrogenase, putative, expressed -
7 Sobic.002G123600 expressed protein -
8 Sobic.002G043000 HEN1, putative, expressed -
9 Sobic.001G361200 expressed protein -
10 Sobic.006G127200 kelch repeat protein, putative, expressed -
11 Sobic.009G052100 tubulin/FtsZ domain containing protein, putative, expressed K10389: tubulin gamma
12 Sobic.004G306100 expressed protein -
13 Sobic.009G120400 methyltransferase, putative, expressed -
14 Sobic.007G031300 endonuclease/exonuclease/phosphatase family domain containing protein, expressed -
15 Sobic.010G172400 transmembrane 9 superfamily member, putative, expressed K17086: transmembrane 9 superfamily member 2/4
16 Sobic.002G066800 RNA ligase isoform 1, putative, expressed -
17 Sobic.004G256300 RNA polymerase Rpb4, putative, expressed K03012: RPB4, DNA-directed RNA polymerase II subunit RPB4
18 Sobic.004G000400 OsPDIL1-4 protein disulfide isomerase PDIL1-4, expressed K09580: PDIA1, protein disulfide-isomerase A1
19 Sobic.003G360300 exostosin family domain containing protein, expressed -
20 Sobic.007G051400 transmembrane 9 superfamily member, putative, expressed -


Gene co-expression network
sample Sobic004G129500 Sobic004G129500 Sobic007G036800 Sobic007G036800 Sobic004G129500--Sobic007G036800 Sobic010G103500 Sobic010G103500 Sobic004G129500--Sobic010G103500 Sobic001G296800 Sobic001G296800 Sobic004G129500--Sobic001G296800 Sobic003G028400 Sobic003G028400 Sobic004G129500--Sobic003G028400 Sobic003G411700 Sobic003G411700 Sobic004G129500--Sobic003G411700 Sobic002G426100 Sobic002G426100 Sobic004G129500--Sobic002G426100 Sobic002G123600 Sobic002G123600 Sobic004G129500--Sobic002G123600 Sobic002G043000 Sobic002G043000 Sobic004G129500--Sobic002G043000 Sobic001G361200 Sobic001G361200 Sobic004G129500--Sobic001G361200 Sobic007G036800--Sobic004G129500 Sobic007G036800--Sobic010G103500 Sobic004G145600 Sobic004G145600 Sobic007G036800--Sobic004G145600 Sobic008G112100 Sobic008G112100 Sobic007G036800--Sobic008G112100 Sobic010G059700 Sobic010G059700 Sobic007G036800--Sobic010G059700 Sobic007G010200 Sobic007G010200 Sobic007G036800--Sobic007G010200 Sobic004G350200 Sobic004G350200 Sobic007G036800--Sobic004G350200 Sobic007G036800--Sobic002G123600 Sobic004G256300 Sobic004G256300 Sobic007G036800--Sobic004G256300 Sobic002G260700 Sobic002G260700 Sobic010G103500--Sobic002G260700 Sobic004G306100 Sobic004G306100 Sobic010G103500--Sobic004G306100 Sobic010G103500--Sobic003G411700 Sobic010G103500--Sobic004G129500 Sobic010G103500--Sobic007G036800 Sobic010G103500--Sobic001G296800 Sobic004G315700 Sobic004G315700 Sobic010G103500--Sobic004G315700 Sobic002G271400 Sobic002G271400 Sobic010G103500--Sobic002G271400 Sobic010G052400 Sobic010G052400 Sobic010G103500--Sobic010G052400 Sobic009G212100 Sobic009G212100 Sobic001G296800--Sobic009G212100 Sobic001G296800--Sobic004G315700 Sobic001G296800--Sobic010G103500 Sobic001G487200 Sobic001G487200 Sobic001G296800--Sobic001G487200 Sobic001G296800--Sobic004G129500 Sobic001G296800--Sobic001G361200 Sobic002G370400 Sobic002G370400 Sobic001G296800--Sobic002G370400 Sobic001G212600 Sobic001G212600 Sobic001G296800--Sobic001G212600 Sobic009G052100 Sobic009G052100 Sobic001G296800--Sobic009G052100 Sobic003G028400--Sobic004G129500 Sobic003G331000 Sobic003G331000 Sobic003G028400--Sobic003G331000 Sobic003G259600 Sobic003G259600 Sobic003G028400--Sobic003G259600 Sobic001G123600 Sobic001G123600 Sobic003G028400--Sobic001G123600 Sobic007G031300 Sobic007G031300 Sobic003G028400--Sobic007G031300 Sobic003G028400--Sobic002G123600 Sobic001G465500 Sobic001G465500 Sobic003G028400--Sobic001G465500 Sobic007G030600 Sobic007G030600 Sobic003G028400--Sobic007G030600 Sobic001G242300 Sobic001G242300 Sobic003G028400--Sobic001G242300 Sobic010G222800 Sobic010G222800 Sobic003G411700--Sobic010G222800 Sobic003G411700--Sobic004G306100 Sobic003G411700--Sobic002G271400 Sobic003G411700--Sobic010G103500 Sobic001G425200 Sobic001G425200 Sobic003G411700--Sobic001G425200 Sobic003G343200 Sobic003G343200 Sobic003G411700--Sobic003G343200 Sobic003G411700--Sobic001G212600 Sobic010G024000 Sobic010G024000 Sobic003G411700--Sobic010G024000 Sobic005G160200 Sobic005G160200 Sobic003G411700--Sobic005G160200 Sobic009G120400 Sobic009G120400 Sobic002G426100--Sobic009G120400 Sobic008G111600 Sobic008G111600 Sobic002G426100--Sobic008G111600 Sobic006G181800 Sobic006G181800 Sobic002G426100--Sobic006G181800 Sobic002G078100 Sobic002G078100 Sobic002G426100--Sobic002G078100 Sobic002G426100--Sobic002G043000 Sobic006G017800 Sobic006G017800 Sobic002G426100--Sobic006G017800 Sobic002G066800 Sobic002G066800 Sobic002G426100--Sobic002G066800 Sobic007G186400 Sobic007G186400 Sobic002G426100--Sobic007G186400 Sobic002G426100--Sobic004G129500 Sobic006G127200 Sobic006G127200 Sobic002G123600--Sobic006G127200 Sobic008G090400 Sobic008G090400 Sobic002G123600--Sobic008G090400 Sobic002G123600--Sobic004G306100 Sobic002G095300 Sobic002G095300 Sobic002G123600--Sobic002G095300 Sobic002G123600--Sobic002G271400 Sobic003G397100 Sobic003G397100 Sobic002G123600--Sobic003G397100 Sobic002G123600--Sobic001G242300 Sobic002G123600--Sobic003G411700 Sobic002G123600--Sobic004G129500 Sobic002G043000--Sobic008G111600 Sobic004G215900 Sobic004G215900 Sobic002G043000--Sobic004G215900 Sobic002G043000--Sobic002G426100 Sobic006G236000 Sobic006G236000 Sobic002G043000--Sobic006G236000 Sobic008G068100 Sobic008G068100 Sobic002G043000--Sobic008G068100 Sobic002G043000--Sobic006G181800 Sobic004G038100 Sobic004G038100 Sobic002G043000--Sobic004G038100 Sobic006G280100 Sobic006G280100 Sobic002G043000--Sobic006G280100 Sobic002G043000--Sobic004G129500 Sobic002G192900 Sobic002G192900 Sobic001G361200--Sobic002G192900 Sobic001G154300 Sobic001G154300 Sobic001G361200--Sobic001G154300 Sobic003G184300 Sobic003G184300 Sobic001G361200--Sobic003G184300 Sobic004G328300 Sobic004G328300 Sobic001G361200--Sobic004G328300 Sobic001G361200--Sobic001G296800 Sobic003G315700 Sobic003G315700 Sobic001G361200--Sobic003G315700 Sobic006G095000 Sobic006G095000 Sobic001G361200--Sobic006G095000 Sobic001G361200--Sobic003G411700 Sobic001G361200--Sobic004G306100
Octagon: transcription factors


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