Gene annotation
Transcriptome id Sobic.002G362700.2,Sobic.002G362700.1
Synonym Sb02g038270
Functional annotation zinc finger family protein, putative, expressed
UniProt C5XD73 , A0A1W0W706
Pfam PF01529
Panther DB PTHR22883 PTHR22883:SF105 PTHR22883 PTHR22883:SF96
NCBI CDD KOG1311; DHHC-type Zn-finger proteins
KEGG Orthology -
Gene Ontology GO:0008270; zinc ion binding


Orthologs (automatic annotation)
TAIR AT1G69420 : DHHC-type zinc finger family protein
RAP-DB (Rice) LOC_Os03g11110.1 : zinc finger family protein, putative, expressed
MaizeGDB (Corn) Zm00025a048643 , Zm00025a015090
Brachypodium -
Barley HORVU2Hr1G034630.2 , HORVU2Hr1G034630.7 , HORVU3Hr1G033580.1 , HORVU2Hr1G034630.18 , HORVU2Hr1G034630.19 , HORVU2Hr1G034630.12 , HORVU2Hr1G034630.13 , HORVU2Hr1G034630.10 , HORVU2Hr1G034630.11 , HORVU2Hr1G034630.16 , HORVU2Hr1G034630.17 , HORVU2Hr1G034630.14 , HORVU2Hr1G034630.15 , HORVU4Hr1G069190.5 , HORVU4Hr1G069190.4 , HORVU4Hr1G069190.7 , HORVU4Hr1G069190.6 , HORVU4Hr1G069190.1 , HORVU4Hr1G069190.3 , HORVU4Hr1G069190.2 , HORVU4Hr1G069190.9 , HORVU4Hr1G069190.8 , HORVU2Hr1G034630.1 , HORVU2Hr1G034630.3 , HORVU2Hr1G034630.4 , HORVU2Hr1G034630.5 , HORVU2Hr1G034630.6 , HORVU2Hr1G034630.8 , HORVU2Hr1G034630.9 , HORVU4Hr1G060520.1
Wheat TraesCS2A02G183200 , TraesCS2D02G191000 , TraesCS2B02G209800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G031700 protein kinase family protein, putative, expressed -
2 Sobic.001G074100 kinesin motor domain containing protein, putative, expressed K10401: kinesin family member 18/19
3 Sobic.001G522300 leucine-rich repeat transmembrane protein kinase, putative, expressed -
4 Sobic.004G164700 expressed protein -
5 Sobic.010G241100 thaumatin family domain containing protein, expressed -
6 Sobic.003G032200 IQ calmodulin-binding motif domain containing protein, expressed -
7 Sobic.010G211800 TKL_IRAK_CrRLK1L-1.14 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed -
8 Sobic.003G338200 receptor-like protein kinase precursor, putative, expressed -
9 Sobic.002G045200 protein kinase, putative, expressed -
10 Sobic.002G320600 HEAT repeat family protein, putative, expressed -
11 Sobic.006G257200 kinesin motor domain containing protein, putative, expressed -
12 Sobic.010G129700 microtubule associated protein, putative, expressed K16732: protein regulator of cytokinesis 1
13 Sobic.001G381100 receptor-like protein kinase precursor, putative, expressed -
14 Sobic.003G289800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@serine/threonine-protein kinase, putative, expressed -
15 Sobic.007G160300 cyclin, putative, expressed K18810: cyclin D1/2/4, plant
16 Sobic.007G116800 BURP domain containing protein, expressed -
17 Sobic.008G083500 expressed protein -
18 Sobic.006G241800 receptor kinase, putative, expressed -
19 Sobic.002G383100 expressed protein -
20 Sobic.003G444100 "OsCCS52B(Ortholog in rice:Su’udi et al., 2012)"(PubMedID : 31659875)@WD repeat-containing protein, putative, expressed K03364: cell division cycle 20-like protein 1, cofactor of APC complex


Gene co-expression network
sample Sobic002G362700 Sobic002G362700 Sobic003G031700 Sobic003G031700 Sobic002G362700--Sobic003G031700 Sobic001G074100 Sobic001G074100 Sobic002G362700--Sobic001G074100 Sobic001G522300 Sobic001G522300 Sobic002G362700--Sobic001G522300 Sobic004G164700 Sobic004G164700 Sobic002G362700--Sobic004G164700 Sobic010G241100 Sobic010G241100 Sobic002G362700--Sobic010G241100 Sobic003G032200 Sobic003G032200 Sobic002G362700--Sobic003G032200 Sobic010G211800 Sobic010G211800 Sobic002G362700--Sobic010G211800 Sobic003G338200 Sobic003G338200 Sobic002G362700--Sobic003G338200 Sobic002G045200 Sobic002G045200 Sobic002G362700--Sobic002G045200 Sobic003G031700--Sobic002G362700 Sobic002G320600 Sobic002G320600 Sobic003G031700--Sobic002G320600 Sobic006G193100 Sobic006G193100 Sobic003G031700--Sobic006G193100 Sobic003G031700--Sobic001G074100 Sobic009G202801 Sobic009G202801 Sobic003G031700--Sobic009G202801 Sobic003G031700--Sobic001G522300 Sobic001G008300 Sobic001G008300 Sobic003G031700--Sobic001G008300 Sobic003G031700--Sobic010G211800 Sobic007G087800 Sobic007G087800 Sobic003G031700--Sobic007G087800 Sobic001G381100 Sobic001G381100 Sobic001G074100--Sobic001G381100 Sobic001G074100--Sobic003G031700 Sobic001G074100--Sobic002G362700 Sobic006G241800 Sobic006G241800 Sobic001G074100--Sobic006G241800 Sobic001G074100--Sobic010G211800 Sobic001G074100--Sobic002G045200 Sobic003G291000 Sobic003G291000 Sobic001G074100--Sobic003G291000 Sobic009G124800 Sobic009G124800 Sobic001G074100--Sobic009G124800 Sobic010G211700 Sobic010G211700 Sobic001G074100--Sobic010G211700 Sobic001G074000 Sobic001G074000 Sobic001G522300--Sobic001G074000 Sobic007G116800 Sobic007G116800 Sobic001G522300--Sobic007G116800 Sobic001G493900 Sobic001G493900 Sobic001G522300--Sobic001G493900 Sobic001G522300--Sobic003G031700 Sobic001G522300--Sobic002G362700 Sobic001G286400 Sobic001G286400 Sobic001G522300--Sobic001G286400 Sobic009G235700 Sobic009G235700 Sobic001G522300--Sobic009G235700 Sobic009G129700 Sobic009G129700 Sobic001G522300--Sobic009G129700 Sobic004G283800 Sobic004G283800 Sobic001G522300--Sobic004G283800 Sobic004G164700--Sobic006G241800 Sobic004G164700--Sobic002G362700 Sobic008G190000 Sobic008G190000 Sobic004G164700--Sobic008G190000 Sobic001G461800 Sobic001G461800 Sobic004G164700--Sobic001G461800 Sobic006G142500 Sobic006G142500 Sobic004G164700--Sobic006G142500 Sobic010G024500 Sobic010G024500 Sobic004G164700--Sobic010G024500 Sobic003G041900 Sobic003G041900 Sobic004G164700--Sobic003G041900 Sobic001G425700 Sobic001G425700 Sobic004G164700--Sobic001G425700 Sobic010G086000 Sobic010G086000 Sobic004G164700--Sobic010G086000 Sobic010G192500 Sobic010G192500 Sobic010G241100--Sobic010G192500 Sobic010G241100--Sobic010G086000 Sobic010G241100--Sobic003G032200 Sobic002G337600 Sobic002G337600 Sobic010G241100--Sobic002G337600 Sobic002G394500 Sobic002G394500 Sobic010G241100--Sobic002G394500 Sobic002G222500 Sobic002G222500 Sobic010G241100--Sobic002G222500 Sobic010G023400 Sobic010G023400 Sobic010G241100--Sobic010G023400 Sobic001G452900 Sobic001G452900 Sobic010G241100--Sobic001G452900 Sobic007G160300 Sobic007G160300 Sobic010G241100--Sobic007G160300 Sobic009G184200 Sobic009G184200 Sobic003G032200--Sobic009G184200 Sobic003G032200--Sobic010G086000 Sobic010G105400 Sobic010G105400 Sobic003G032200--Sobic010G105400 Sobic003G032200--Sobic010G241100 Sobic009G172950 Sobic009G172950 Sobic003G032200--Sobic009G172950 Sobic003G032200--Sobic006G142500 Sobic002G296000 Sobic002G296000 Sobic003G032200--Sobic002G296000 Sobic003G444100 Sobic003G444100 Sobic003G032200--Sobic003G444100 Sobic002G204400 Sobic002G204400 Sobic003G032200--Sobic002G204400 Sobic010G211800--Sobic010G211700 Sobic002G360500 Sobic002G360500 Sobic010G211800--Sobic002G360500 Sobic002G417000 Sobic002G417000 Sobic010G211800--Sobic002G417000 Sobic010G211800--Sobic003G031700 Sobic010G211800--Sobic002G045200 Sobic010G211800--Sobic001G074100 Sobic010G211800--Sobic002G362700 Sobic010G211800--Sobic006G241800 Sobic008G096200 Sobic008G096200 Sobic010G211800--Sobic008G096200 Sobic002G032500 Sobic002G032500 Sobic003G338200--Sobic002G032500 Sobic002G419200 Sobic002G419200 Sobic003G338200--Sobic002G419200 Sobic003G309400 Sobic003G309400 Sobic003G338200--Sobic003G309400 Sobic004G248100 Sobic004G248100 Sobic003G338200--Sobic004G248100 Sobic001G345200 Sobic001G345200 Sobic003G338200--Sobic001G345200 Sobic003G116100 Sobic003G116100 Sobic003G338200--Sobic003G116100 Sobic007G094200 Sobic007G094200 Sobic003G338200--Sobic007G094200 Sobic003G277200 Sobic003G277200 Sobic003G338200--Sobic003G277200 Sobic003G300400 Sobic003G300400 Sobic003G338200--Sobic003G300400 Sobic001G389600 Sobic001G389600 Sobic002G045200--Sobic001G389600 Sobic002G045200--Sobic010G211800 Sobic002G045200--Sobic001G074100 Sobic010G165100 Sobic010G165100 Sobic002G045200--Sobic010G165100 Sobic002G045200--Sobic006G241800 Sobic002G045200--Sobic001G522300 Sobic002G045200--Sobic002G362700 Sobic002G311000 Sobic002G311000 Sobic002G045200--Sobic002G311000 Sobic002G142500 Sobic002G142500 Sobic002G045200--Sobic002G142500
Octagon: transcription factors


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