Gene annotation
Transcriptome id Sobic.003G032200.2,Sobic.003G032200.1
Synonym IQD6, Sb03g002990
Functional annotation IQ calmodulin-binding motif domain containing protein, expressed
UniProt A0A1W0VVK2 , A0A1B6Q134
Pfam PF00612
Panther DB PTHR32295 PTHR32295:SF6
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT2G26180 : IQ-domain 6
RAP-DB (Rice) LOC_Os01g09790.1 : IQ calmodulin-binding motif domain containing protein, expressed
MaizeGDB (Corn) Zm00025a030259 , Zm00025a023019
Brachypodium KQK21655 , KQK21657 , KQK21656 , PNT77412 , KQK03147
Barley HORVU3Hr1G019240.1 , HORVU3Hr1G019240.3 , HORVU3Hr1G019240.2 , HORVU3Hr1G019270.1
Wheat TraesCS3A02G105600 , TraesCS3B02G124000 , TraesCS3B02G124000 , TraesCS3D02G107700
Populus -


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cDNA sequences
Sobic.003G032200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G184200 RecF/RecN/SMC N terminal domain containing protein, expressed K06675: structural maintenance of chromosome 4
2 Sobic.010G086000 cyclin, putative, expressed K18810: cyclin D1/2/4, plant
3 Sobic.010G105400 chromosome condensation protein like, putative, expressed K06678: YCG1, condensin complex subunit 3
4 Sobic.010G241100 thaumatin family domain containing protein, expressed -
5 Sobic.009G172950 - K02541: DNA replication licensing factor MCM3
6 Sobic.006G142500 protein kinase, putative, expressed -
7 Sobic.002G296000 HEAT repeat family protein, putative, expressed -
8 Sobic.003G444100 "OsCCS52B(Ortholog in rice:Su’udi et al., 2012)"(PubMedID : 31659875)@WD repeat-containing protein, putative, expressed K03364: cell division cycle 20-like protein 1, cofactor of APC complex
9 Sobic.002G204400 kinesin motor protein-related, putative, expressed K11498: centromeric protein E
10 Sobic.002G272300 expressed protein -
11 Sobic.007G168900 kinesin motor domain containing protein, putative, expressed K10398: KIF11, kinesin family member 11
12 Sobic.001G398400 expressed protein -
13 Sobic.009G101100 patellin protein, putative, expressed -
14 Sobic.001G377700 expressed protein K10895: fanconi anemia group I protein
15 Sobic.010G147700 WD domain, G-beta repeat domain containing protein, expressed K11274: WDHD1, chromosome transmission fidelity protein 4
16 Sobic.005G000500 kinesin motor domain containing protein, putative, expressed K10398: KIF11, kinesin family member 11
17 Sobic.002G222500 lysM domain-containing GPI-anchored protein precursor, putative, expressed -
18 Sobic.003G292700 kinesin motor protein-related, putative, expressed K10406: kinesin family member C2/C3
19 Sobic.001G155700 expansin precursor, putative, expressed -
20 Sobic.001G054700 seed specific protein Bn15D14A, putative, expressed -


Gene co-expression network
sample Sobic003G032200 Sobic003G032200 Sobic009G184200 Sobic009G184200 Sobic003G032200--Sobic009G184200 Sobic010G086000 Sobic010G086000 Sobic003G032200--Sobic010G086000 Sobic010G105400 Sobic010G105400 Sobic003G032200--Sobic010G105400 Sobic010G241100 Sobic010G241100 Sobic003G032200--Sobic010G241100 Sobic009G172950 Sobic009G172950 Sobic003G032200--Sobic009G172950 Sobic006G142500 Sobic006G142500 Sobic003G032200--Sobic006G142500 Sobic002G296000 Sobic002G296000 Sobic003G032200--Sobic002G296000 Sobic003G444100 Sobic003G444100 Sobic003G032200--Sobic003G444100 Sobic002G204400 Sobic002G204400 Sobic003G032200--Sobic002G204400 Sobic009G184200--Sobic002G204400 Sobic009G184200--Sobic010G105400 Sobic001G398400 Sobic001G398400 Sobic009G184200--Sobic001G398400 Sobic003G393100 Sobic003G393100 Sobic009G184200--Sobic003G393100 Sobic010G129700 Sobic010G129700 Sobic009G184200--Sobic010G129700 Sobic009G184200--Sobic003G032200 Sobic001G170800 Sobic001G170800 Sobic009G184200--Sobic001G170800 Sobic007G007800 Sobic007G007800 Sobic009G184200--Sobic007G007800 Sobic003G260700 Sobic003G260700 Sobic009G184200--Sobic003G260700 Sobic010G086000--Sobic006G142500 Sobic010G086000--Sobic003G032200 Sobic010G086000--Sobic010G241100 Sobic001G452900 Sobic001G452900 Sobic010G086000--Sobic001G452900 Sobic010G192500 Sobic010G192500 Sobic010G086000--Sobic010G192500 Sobic004G234500 Sobic004G234500 Sobic010G086000--Sobic004G234500 Sobic004G267600 Sobic004G267600 Sobic010G086000--Sobic004G267600 Sobic002G284100 Sobic002G284100 Sobic010G086000--Sobic002G284100 Sobic001G054700 Sobic001G054700 Sobic010G086000--Sobic001G054700 Sobic005G144600 Sobic005G144600 Sobic010G105400--Sobic005G144600 Sobic004G047100 Sobic004G047100 Sobic010G105400--Sobic004G047100 Sobic010G105400--Sobic009G184200 Sobic005G000500 Sobic005G000500 Sobic010G105400--Sobic005G000500 Sobic010G105400--Sobic001G398400 Sobic003G179500 Sobic003G179500 Sobic010G105400--Sobic003G179500 Sobic006G124400 Sobic006G124400 Sobic010G105400--Sobic006G124400 Sobic007G168900 Sobic007G168900 Sobic010G105400--Sobic007G168900 Sobic010G105400--Sobic002G204400 Sobic010G241100--Sobic010G192500 Sobic010G241100--Sobic010G086000 Sobic010G241100--Sobic003G032200 Sobic002G337600 Sobic002G337600 Sobic010G241100--Sobic002G337600 Sobic002G394500 Sobic002G394500 Sobic010G241100--Sobic002G394500 Sobic002G222500 Sobic002G222500 Sobic010G241100--Sobic002G222500 Sobic010G023400 Sobic010G023400 Sobic010G241100--Sobic010G023400 Sobic010G241100--Sobic001G452900 Sobic007G160300 Sobic007G160300 Sobic010G241100--Sobic007G160300 Sobic003G183700 Sobic003G183700 Sobic009G172950--Sobic003G183700 Sobic009G087000 Sobic009G087000 Sobic009G172950--Sobic009G087000 Sobic009G172950--Sobic003G032200 Sobic003G444300 Sobic003G444300 Sobic009G172950--Sobic003G444300 Sobic001G083300 Sobic001G083300 Sobic009G172950--Sobic001G083300 Sobic009G172950--Sobic009G184200 Sobic004G321400 Sobic004G321400 Sobic009G172950--Sobic004G321400 Sobic001G105800 Sobic001G105800 Sobic009G172950--Sobic001G105800 Sobic001G146900 Sobic001G146900 Sobic009G172950--Sobic001G146900 Sobic006G142500--Sobic010G086000 Sobic006G142500--Sobic004G267600 Sobic006G142500--Sobic010G192500 Sobic009G225500 Sobic009G225500 Sobic006G142500--Sobic009G225500 Sobic006G142500--Sobic003G032200 Sobic006G142500--Sobic004G234500 Sobic009G127800 Sobic009G127800 Sobic006G142500--Sobic009G127800 Sobic009G047000 Sobic009G047000 Sobic006G142500--Sobic009G047000 Sobic001G390400 Sobic001G390400 Sobic006G142500--Sobic001G390400 Sobic007G027900 Sobic007G027900 Sobic002G296000--Sobic007G027900 Sobic002G296000--Sobic006G124400 Sobic009G101100 Sobic009G101100 Sobic002G296000--Sobic009G101100 Sobic002G296000--Sobic007G168900 Sobic005G005700 Sobic005G005700 Sobic002G296000--Sobic005G005700 Sobic008G006800 Sobic008G006800 Sobic002G296000--Sobic008G006800 Sobic004G271300 Sobic004G271300 Sobic002G296000--Sobic004G271300 Sobic010G017400 Sobic010G017400 Sobic002G296000--Sobic010G017400 Sobic008G083500 Sobic008G083500 Sobic002G296000--Sobic008G083500 Sobic003G444100--Sobic005G000500 Sobic003G444100--Sobic001G170800 Sobic003G444100--Sobic003G260700 Sobic003G444100--Sobic007G168900 Sobic001G177900 Sobic001G177900 Sobic003G444100--Sobic001G177900 Sobic003G444100--Sobic001G398400 Sobic004G257600 Sobic004G257600 Sobic003G444100--Sobic004G257600 Sobic003G314900 Sobic003G314900 Sobic003G444100--Sobic003G314900 Sobic003G444100--Sobic010G105400 Sobic002G204400--Sobic009G184200 Sobic008G148000 Sobic008G148000 Sobic002G204400--Sobic008G148000 Sobic002G204400--Sobic003G393100 Sobic002G204400--Sobic010G105400 Sobic006G281400 Sobic006G281400 Sobic002G204400--Sobic006G281400 Sobic002G204400--Sobic005G000500 Sobic002G204400--Sobic007G027900 Sobic002G204400--Sobic001G398400 Sobic002G204400--Sobic004G271300
Octagon: transcription factors


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