Gene annotation
Transcriptome id Sobic.002G403000.1
Synonym Sb02g041760
Functional annotation eukaryotic aspartyl protease domain containing protein, expressed
UniProt C5X470
Pfam PF00026
Panther DB PTHR13683 PTHR13683:SF258
NCBI CDD KOG1339; Aspartyl protease
KEGG Orthology -
Gene Ontology GO:0006508; proteolysis GO:0004190aspartic-type endopeptidase activity


Orthologs (automatic annotation)
TAIR AT3G54400 : Eukaryotic aspartyl protease family protein
RAP-DB (Rice) LOC_Os07g46480.1 : eukaryotic aspartyl protease domain containing protein, expressed
MaizeGDB (Corn) Zm00025a039104 , Zm00025a049030
Brachypodium KQK11605
Barley HORVU7Hr1G116780.2 , HORVU7Hr1G116780.1 , HORVU2Hr1G022820.2 , HORVU2Hr1G022820.1 , HORVU3Hr1G109040.1 , HORVU3Hr1G109040.2
Wheat -
Populus -


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cDNA sequences
Sobic.002G403000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G389600 expressed protein -
2 Sobic.001G478100 aspartic proteinase nepenthesin precursor, putative, expressed -
3 Sobic.002G428000 expressed protein -
4 Sobic.010G165100 expressed protein -
5 Sobic.002G045200 protein kinase, putative, expressed -
6 Sobic.008G110400 haemolysin-III, putative, expressed K07297: adiponectin receptor
7 Sobic.002G246000 expressed protein -
8 Sobic.003G277200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@IQ calmodulin-binding motif family protein, putative, expressed -
9 Sobic.010G107200 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
10 Sobic.002G362700 zinc finger family protein, putative, expressed -
11 Sobic.001G074100 kinesin motor domain containing protein, putative, expressed K10401: kinesin family member 18/19
12 Sobic.003G419700 classical arabinogalactan protein 26 precursor, putative, expressed -
13 Sobic.003G078300 leucine-rich repeat protein-related, putative, expressed -
14 Sobic.006G032800 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@glycosyl hydrolase family 10 protein, putative, expressed -
15 Sobic.006G044200 glycosyl hydrolase, putative, expressed K01183: chitinase
16 Sobic.001G522300 leucine-rich repeat transmembrane protein kinase, putative, expressed -
17 Sobic.009G235700 transporter family protein, putative, expressed K08145: SLC2A8, MFS transporter, SP family, solute carrier family 2 (facilitated glucose transporter), member 8
18 Sobic.002G142500 expressed protein -
19 Sobic.003G018700 CIN-like (ClassII) Subclade 17 TCP(PubMedID : 21444336)@SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@"TCP is actually a family of transcription factors named after: teosinte branched 1 (tb1, Zea mays (Maize)), cycloidea (cyc) (Antirrhinum majus) (Garden snapdragon) and PCF in rice (Oryza sativa)."(PubMedID : 27917941)@"plant-specific TCP family of transcription factors, in particular, have been shown to play key roles in evolution of plant form and structure (putative)"(PubMedID : 28383054)@TCP family transcription factor, putative, expressed -
20 Sobic.009G134000 receptor-like protein kinase precursor, putative, expressed -


Gene co-expression network
sample Sobic002G403000 Sobic002G403000 Sobic001G389600 Sobic001G389600 Sobic002G403000--Sobic001G389600 Sobic001G478100 Sobic001G478100 Sobic002G403000--Sobic001G478100 Sobic002G428000 Sobic002G428000 Sobic002G403000--Sobic002G428000 Sobic010G165100 Sobic010G165100 Sobic002G403000--Sobic010G165100 Sobic002G045200 Sobic002G045200 Sobic002G403000--Sobic002G045200 Sobic008G110400 Sobic008G110400 Sobic002G403000--Sobic008G110400 Sobic002G246000 Sobic002G246000 Sobic002G403000--Sobic002G246000 Sobic003G277200 Sobic003G277200 Sobic002G403000--Sobic003G277200 Sobic010G107200 Sobic010G107200 Sobic002G403000--Sobic010G107200 Sobic001G389600--Sobic002G403000 Sobic001G389600--Sobic010G165100 Sobic001G389600--Sobic001G478100 Sobic001G389600--Sobic002G045200 Sobic001G389600--Sobic010G107200 Sobic002G142500 Sobic002G142500 Sobic001G389600--Sobic002G142500 Sobic001G389600--Sobic002G246000 Sobic001G389600--Sobic002G428000 Sobic006G032800 Sobic006G032800 Sobic001G389600--Sobic006G032800 Sobic001G478100--Sobic001G389600 Sobic006G233600 Sobic006G233600 Sobic001G478100--Sobic006G233600 Sobic001G478100--Sobic010G107200 Sobic001G478100--Sobic002G403000 Sobic010G143300 Sobic010G143300 Sobic001G478100--Sobic010G143300 Sobic001G478100--Sobic006G032800 Sobic005G196500 Sobic005G196500 Sobic001G478100--Sobic005G196500 Sobic007G142300 Sobic007G142300 Sobic001G478100--Sobic007G142300 Sobic001G478100--Sobic010G165100 Sobic002G428000--Sobic001G389600 Sobic002G428000--Sobic002G403000 Sobic003G283400 Sobic003G283400 Sobic002G428000--Sobic003G283400 Sobic009G151100 Sobic009G151100 Sobic002G428000--Sobic009G151100 Sobic002G428000--Sobic001G478100 Sobic002G428000--Sobic007G142300 Sobic002G428000--Sobic010G165100 Sobic009G235700 Sobic009G235700 Sobic002G428000--Sobic009G235700 Sobic004G344100 Sobic004G344100 Sobic002G428000--Sobic004G344100 Sobic010G165100--Sobic002G246000 Sobic010G165100--Sobic001G389600 Sobic010G165100--Sobic002G142500 Sobic010G165100--Sobic002G045200 Sobic006G274866 Sobic006G274866 Sobic010G165100--Sobic006G274866 Sobic010G165100--Sobic002G403000 Sobic010G165100--Sobic006G032800 Sobic002G311000 Sobic002G311000 Sobic010G165100--Sobic002G311000 Sobic004G243800 Sobic004G243800 Sobic010G165100--Sobic004G243800 Sobic002G045200--Sobic001G389600 Sobic010G211800 Sobic010G211800 Sobic002G045200--Sobic010G211800 Sobic001G074100 Sobic001G074100 Sobic002G045200--Sobic001G074100 Sobic002G045200--Sobic010G165100 Sobic006G241800 Sobic006G241800 Sobic002G045200--Sobic006G241800 Sobic001G522300 Sobic001G522300 Sobic002G045200--Sobic001G522300 Sobic002G362700 Sobic002G362700 Sobic002G045200--Sobic002G362700 Sobic002G045200--Sobic002G311000 Sobic002G045200--Sobic002G142500 Sobic006G219100 Sobic006G219100 Sobic008G110400--Sobic006G219100 Sobic002G382500 Sobic002G382500 Sobic008G110400--Sobic002G382500 Sobic002G068400 Sobic002G068400 Sobic008G110400--Sobic002G068400 Sobic003G041801 Sobic003G041801 Sobic008G110400--Sobic003G041801 Sobic008G110400--Sobic002G403000 Sobic006G015900 Sobic006G015900 Sobic008G110400--Sobic006G015900 Sobic010G027700 Sobic010G027700 Sobic008G110400--Sobic010G027700 Sobic004G215000 Sobic004G215000 Sobic008G110400--Sobic004G215000 Sobic001G179400 Sobic001G179400 Sobic008G110400--Sobic001G179400 Sobic002G246000--Sobic010G165100 Sobic002G246000--Sobic001G389600 Sobic002G246000--Sobic002G045200 Sobic002G246000--Sobic002G142500 Sobic002G246000--Sobic006G032800 Sobic002G246000--Sobic010G107200 Sobic002G246000--Sobic002G311000 Sobic002G246000--Sobic002G403000 Sobic002G246000--Sobic003G277200 Sobic002G419200 Sobic002G419200 Sobic003G277200--Sobic002G419200 Sobic003G338200 Sobic003G338200 Sobic003G277200--Sobic003G338200 Sobic003G116100 Sobic003G116100 Sobic003G277200--Sobic003G116100 Sobic008G039800 Sobic008G039800 Sobic003G277200--Sobic008G039800 Sobic010G216600 Sobic010G216600 Sobic003G277200--Sobic010G216600 Sobic001G345200 Sobic001G345200 Sobic003G277200--Sobic001G345200 Sobic001G285200 Sobic001G285200 Sobic003G277200--Sobic001G285200 Sobic007G012800 Sobic007G012800 Sobic003G277200--Sobic007G012800 Sobic001G037400 Sobic001G037400 Sobic003G277200--Sobic001G037400 Sobic005G209900 Sobic005G209900 Sobic010G107200--Sobic005G209900 Sobic010G107200--Sobic005G196500 Sobic010G107200--Sobic006G233600 Sobic009G154100 Sobic009G154100 Sobic010G107200--Sobic009G154100 Sobic010G107200--Sobic006G032800 Sobic010G107200--Sobic007G142300 Sobic010G107200--Sobic001G389600 Sobic010G107200--Sobic001G478100 Sobic005G147800 Sobic005G147800 Sobic010G107200--Sobic005G147800
Octagon: transcription factors


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