Gene annotation
Transcriptome id Sobic.003G333000.1
Synonym Sb03g037810
Functional annotation LTPL65 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
UniProt C5XN62
Pfam PF14368
Panther DB PTHR33044 PTHR33044:SF24
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G43720 : Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
RAP-DB (Rice) LOC_Os01g59870.1 : LTPL65 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
MaizeGDB (Corn) Zm00025a039802
Brachypodium -
Barley HORVU3Hr1G079800.1 , HORVU3Hr1G079800.3 , HORVU3Hr1G079800.2
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G107200 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
2 Sobic.005G196500 embryogenesis transmembrane protein, putative, expressed -
3 Sobic.009G154100 expressed protein -
4 Sobic.002G315000 - -
5 Sobic.005G209900 expressed protein -
6 Sobic.002G201100 ZF-HD protein dimerisation region containing protein, expressed -
7 Sobic.006G001400 Leucine Rich Repeat family protein, expressed -
8 Sobic.001G478100 aspartic proteinase nepenthesin precursor, putative, expressed -
9 Sobic.005G227050 - -
10 Sobic.004G001200 GDSL-like lipase/acylhydrolase, putative, expressed -
11 Sobic.010G143300 carboxyl-terminal peptidase, putative, expressed -
12 Sobic.002G179700 3-ketoacyl-CoA synthase precursor, putative, expressed K15397: 3-ketoacyl-CoA synthase
13 Sobic.004G291500 LTPL113 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
14 Sobic.001G265900 "similar to Proline-rich protein precursor, structural protein of cell walls in plants"(PubMedID : 24655390)@similar to Proline-rich protein precursor(PubMedID : 24655390)@POEI13 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
15 Sobic.003G420800 glycerol-3-phosphate dehydrogenase, putative, expressed K00006: glycerol-3-phosphate dehydrogenase (NAD+)
16 Sobic.006G233600 Homologous to EPF/EPFL genes in Arabidopsis. Modelling of protein structure.(PubMedID : 23755192)@expressed protein -
17 Sobic.009G055900 fasciclin-like arabinogalactan protein 8 precursor, putative, expressed -
18 Sobic.009G134000 receptor-like protein kinase precursor, putative, expressed -
19 Sobic.005G147800 Ser/Thr protein phosphatase family protein, putative, expressed -
20 Sobic.009G196200 myosin heavy chain-related, putative, expressed -


Gene co-expression network
sample Sobic003G333000 Sobic003G333000 Sobic010G107200 Sobic010G107200 Sobic003G333000--Sobic010G107200 Sobic005G196500 Sobic005G196500 Sobic003G333000--Sobic005G196500 Sobic009G154100 Sobic009G154100 Sobic003G333000--Sobic009G154100 Sobic002G315000 Sobic002G315000 Sobic003G333000--Sobic002G315000 Sobic005G209900 Sobic005G209900 Sobic003G333000--Sobic005G209900 Sobic002G201100 Sobic002G201100 Sobic003G333000--Sobic002G201100 Sobic006G001400 Sobic006G001400 Sobic003G333000--Sobic006G001400 Sobic001G478100 Sobic001G478100 Sobic003G333000--Sobic001G478100 Sobic005G227050 Sobic005G227050 Sobic003G333000--Sobic005G227050 Sobic010G107200--Sobic005G209900 Sobic010G107200--Sobic005G196500 Sobic006G233600 Sobic006G233600 Sobic010G107200--Sobic006G233600 Sobic010G107200--Sobic009G154100 Sobic006G032800 Sobic006G032800 Sobic010G107200--Sobic006G032800 Sobic007G142300 Sobic007G142300 Sobic010G107200--Sobic007G142300 Sobic001G389600 Sobic001G389600 Sobic010G107200--Sobic001G389600 Sobic010G107200--Sobic001G478100 Sobic005G147800 Sobic005G147800 Sobic010G107200--Sobic005G147800 Sobic005G196500--Sobic006G001400 Sobic005G196500--Sobic006G233600 Sobic005G196500--Sobic005G209900 Sobic005G196500--Sobic010G107200 Sobic005G196500--Sobic005G227050 Sobic005G196500--Sobic007G142300 Sobic004G001200 Sobic004G001200 Sobic005G196500--Sobic004G001200 Sobic005G196500--Sobic003G333000 Sobic004G291500 Sobic004G291500 Sobic005G196500--Sobic004G291500 Sobic009G154100--Sobic010G107200 Sobic009G154100--Sobic005G209900 Sobic009G154100--Sobic002G315000 Sobic007G012800 Sobic007G012800 Sobic009G154100--Sobic007G012800 Sobic002G179700 Sobic002G179700 Sobic009G154100--Sobic002G179700 Sobic007G189400 Sobic007G189400 Sobic009G154100--Sobic007G189400 Sobic009G154100--Sobic005G227050 Sobic001G221900 Sobic001G221900 Sobic009G154100--Sobic001G221900 Sobic009G154100--Sobic006G032800 Sobic002G315000--Sobic009G154100 Sobic002G315000--Sobic003G333000 Sobic003G420800 Sobic003G420800 Sobic002G315000--Sobic003G420800 Sobic002G315000--Sobic001G221900 Sobic001G228100 Sobic001G228100 Sobic002G315000--Sobic001G228100 Sobic002G315000--Sobic005G227050 Sobic002G072700 Sobic002G072700 Sobic002G315000--Sobic002G072700 Sobic001G482300 Sobic001G482300 Sobic002G315000--Sobic001G482300 Sobic002G315000--Sobic002G179700 Sobic005G209900--Sobic010G107200 Sobic005G209900--Sobic005G196500 Sobic005G209900--Sobic009G154100 Sobic005G209900--Sobic005G227050 Sobic005G209900--Sobic006G233600 Sobic005G209900--Sobic007G012800 Sobic005G209900--Sobic007G142300 Sobic005G209900--Sobic005G147800 Sobic005G209900--Sobic002G179700 Sobic002G201100--Sobic003G333000 Sobic009G196200 Sobic009G196200 Sobic002G201100--Sobic009G196200 Sobic002G201100--Sobic006G001400 Sobic009G055900 Sobic009G055900 Sobic002G201100--Sobic009G055900 Sobic002G201100--Sobic010G107200 Sobic002G201100--Sobic005G227050 Sobic002G201100--Sobic005G196500 Sobic002G201100--Sobic009G154100 Sobic005G020200 Sobic005G020200 Sobic002G201100--Sobic005G020200 Sobic006G001400--Sobic005G196500 Sobic006G001400--Sobic004G001200 Sobic009G059100 Sobic009G059100 Sobic006G001400--Sobic009G059100 Sobic006G001400--Sobic005G020200 Sobic010G124200 Sobic010G124200 Sobic006G001400--Sobic010G124200 Sobic003G157500 Sobic003G157500 Sobic006G001400--Sobic003G157500 Sobic006G001400--Sobic006G233600 Sobic006G172700 Sobic006G172700 Sobic006G001400--Sobic006G172700 Sobic005G056201 Sobic005G056201 Sobic006G001400--Sobic005G056201 Sobic001G478100--Sobic001G389600 Sobic001G478100--Sobic006G233600 Sobic001G478100--Sobic010G107200 Sobic002G403000 Sobic002G403000 Sobic001G478100--Sobic002G403000 Sobic010G143300 Sobic010G143300 Sobic001G478100--Sobic010G143300 Sobic001G478100--Sobic006G032800 Sobic001G478100--Sobic005G196500 Sobic001G478100--Sobic007G142300 Sobic010G165100 Sobic010G165100 Sobic001G478100--Sobic010G165100 Sobic005G227050--Sobic005G209900 Sobic005G227050--Sobic005G196500 Sobic005G227050--Sobic009G154100 Sobic005G227050--Sobic002G179700 Sobic001G356400 Sobic001G356400 Sobic005G227050--Sobic001G356400 Sobic005G227050--Sobic010G107200 Sobic005G227050--Sobic006G001400 Sobic007G103800 Sobic007G103800 Sobic005G227050--Sobic007G103800 Sobic007G123200 Sobic007G123200 Sobic005G227050--Sobic007G123200
Octagon: transcription factors


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