Gene annotation
Transcriptome id Sobic.003G420800.2,Sobic.003G420800.3
Synonym GPDHC1, Sb03g045390
Functional annotation glycerol-3-phosphate dehydrogenase, putative, expressed
UniProt C5XHQ9
Pfam PF01210 PF07479
Panther DB PTHR11728 PTHR11728:SF17
NCBI CDD KOG2711; Glycerol-3-phosphate dehydrogenase/dihydroxyacetone 3-phosphate reductase
KEGG Orthology K00006; glycerol-3-phosphate dehydrogenase (NAD+)
Gene Ontology GO:0016616; oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor GO:0005975carbohydrate metabolic process GO:0004367glycerol-3-phosphate dehydrogenase [NAD+] activity GO:0009331glycerol-3-phosphate dehydrogenase complex GO:0006072glycerol-3-phosphate metabolic process


Orthologs (automatic annotation)
TAIR AT2G41540 : 6-phosphogluconate dehydrogenase family protein
RAP-DB (Rice) LOC_Os01g71280.1 : glycerol-3-phosphate dehydrogenase, putative, expressed
MaizeGDB (Corn) Zm00025a037857 , Zm00025a026083 , Zm00025a039841
Brachypodium KQK10192 , KQK11461 , KQK11460 , KQK11462 , PNT73566 , KQK05607
Barley HORVU3Hr1G078530.2 , HORVU3Hr1G078530.3 , HORVU3Hr1G078530.1 , HORVU3Hr1G078530.6 , HORVU3Hr1G078530.7 , HORVU3Hr1G078530.5 , HORVU3Hr1G078530.8 , HORVU3Hr1G078530.9 , HORVU3Hr1G104790.8 , HORVU3Hr1G104790.9 , HORVU3Hr1G104790.6 , HORVU3Hr1G104790.7 , HORVU3Hr1G104790.4 , HORVU3Hr1G104790.5 , HORVU3Hr1G104790.2 , HORVU3Hr1G104790.3 , HORVU3Hr1G104790.1 , HORVU3Hr1G078530.10 , HORVU3Hr1G104790.10 , HORVU3Hr1G104790.11 , HORVU3Hr1G104790.12 , HORVU1Hr1G067480.4 , HORVU1Hr1G067480.1 , HORVU1Hr1G067480.2 , HORVU1Hr1G067480.3
Wheat TraesCS3B02G521400 , TraesCS3D02G324000 , TraesCS3D02G324000 , TraesCS3D02G473600 , TraesCS3A02G478100 , TraesCS3A02G330600 , TraesCS3A02G330600 , TraesCS1A02G312400 , TraesCS1D02G312600 , TraesCS3B02G360600
Populus PNT29737 , PNT29738


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cDNA sequences
Sobic.003G420800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G210900 expressed protein -
2 Sobic.002G315000 - -
3 Sobic.005G204100 kelch repeat protein, putative, expressed -
4 Sobic.009G154100 expressed protein -
5 Sobic.002G179700 3-ketoacyl-CoA synthase precursor, putative, expressed K15397: 3-ketoacyl-CoA synthase
6 Sobic.003G333000 LTPL65 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
7 Sobic.003G174900 fimbrin-like protein 2, putative, expressed K17336: plastin-3
8 Sobic.001G482300 3-ketoacyl-CoA synthase 10, putative, expressed K15397: 3-ketoacyl-CoA synthase
9 Sobic.001G047200 carboxyl-terminal peptidase, putative, expressed -
10 Sobic.002G142500 expressed protein -
11 Sobic.007G182600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@tetratricopeptide-like helical, putative, expressed -
12 Sobic.009G248900 expressed protein -
13 Sobic.002G002100 expressed protein -
14 Sobic.002G348700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@carboxyl-terminal peptidase, putative, expressed -
15 Sobic.005G227050 - -
16 Sobic.004G259101 - -
17 Sobic.002G216600 "DEP1(Ortholog in rice:Huang et al., 2009(PubMedID : 31659854)@keratin-associated protein 5-4, putative, expressed -
18 Sobic.003G029300 lachrymatory factor synthase, putative, expressed -
19 Sobic.001G370000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@estradiol 17-beta-dehydrogenase 12, putative, expressed K10251: HSD17B12, KAR, 17beta-estradiol 17-dehydrogenase / very-long-chain 3-oxoacyl-CoA reductase
20 Sobic.009G102800 MRH1, putative, expressed -


Gene co-expression network
sample Sobic003G420800 Sobic003G420800 Sobic007G210900 Sobic007G210900 Sobic003G420800--Sobic007G210900 Sobic002G315000 Sobic002G315000 Sobic003G420800--Sobic002G315000 Sobic005G204100 Sobic005G204100 Sobic003G420800--Sobic005G204100 Sobic009G154100 Sobic009G154100 Sobic003G420800--Sobic009G154100 Sobic002G179700 Sobic002G179700 Sobic003G420800--Sobic002G179700 Sobic003G333000 Sobic003G333000 Sobic003G420800--Sobic003G333000 Sobic003G174900 Sobic003G174900 Sobic003G420800--Sobic003G174900 Sobic001G482300 Sobic001G482300 Sobic003G420800--Sobic001G482300 Sobic001G047200 Sobic001G047200 Sobic003G420800--Sobic001G047200 Sobic007G210900--Sobic003G420800 Sobic004G154600 Sobic004G154600 Sobic007G210900--Sobic004G154600 Sobic004G199700 Sobic004G199700 Sobic007G210900--Sobic004G199700 Sobic002G002100 Sobic002G002100 Sobic007G210900--Sobic002G002100 Sobic002G348700 Sobic002G348700 Sobic007G210900--Sobic002G348700 Sobic004G205500 Sobic004G205500 Sobic007G210900--Sobic004G205500 Sobic006G167300 Sobic006G167300 Sobic007G210900--Sobic006G167300 Sobic008G190500 Sobic008G190500 Sobic007G210900--Sobic008G190500 Sobic007G210900--Sobic002G179700 Sobic002G315000--Sobic009G154100 Sobic002G315000--Sobic003G333000 Sobic002G315000--Sobic003G420800 Sobic001G221900 Sobic001G221900 Sobic002G315000--Sobic001G221900 Sobic001G228100 Sobic001G228100 Sobic002G315000--Sobic001G228100 Sobic005G227050 Sobic005G227050 Sobic002G315000--Sobic005G227050 Sobic002G072700 Sobic002G072700 Sobic002G315000--Sobic002G072700 Sobic002G315000--Sobic001G482300 Sobic002G315000--Sobic002G179700 Sobic002G216600 Sobic002G216600 Sobic005G204100--Sobic002G216600 Sobic009G259500 Sobic009G259500 Sobic005G204100--Sobic009G259500 Sobic005G204100--Sobic002G072700 Sobic007G142900 Sobic007G142900 Sobic005G204100--Sobic007G142900 Sobic002G098500 Sobic002G098500 Sobic005G204100--Sobic002G098500 Sobic005G204100--Sobic001G221900 Sobic001G384700 Sobic001G384700 Sobic005G204100--Sobic001G384700 Sobic006G272500 Sobic006G272500 Sobic005G204100--Sobic006G272500 Sobic007G189400 Sobic007G189400 Sobic005G204100--Sobic007G189400 Sobic010G107200 Sobic010G107200 Sobic009G154100--Sobic010G107200 Sobic005G209900 Sobic005G209900 Sobic009G154100--Sobic005G209900 Sobic009G154100--Sobic002G315000 Sobic007G012800 Sobic007G012800 Sobic009G154100--Sobic007G012800 Sobic009G154100--Sobic002G179700 Sobic009G154100--Sobic007G189400 Sobic009G154100--Sobic005G227050 Sobic009G154100--Sobic001G221900 Sobic006G032800 Sobic006G032800 Sobic009G154100--Sobic006G032800 Sobic002G179700--Sobic009G154100 Sobic002G179700--Sobic005G227050 Sobic002G179700--Sobic005G209900 Sobic001G356400 Sobic001G356400 Sobic002G179700--Sobic001G356400 Sobic005G196500 Sobic005G196500 Sobic002G179700--Sobic005G196500 Sobic006G233600 Sobic006G233600 Sobic002G179700--Sobic006G233600 Sobic002G179700--Sobic010G107200 Sobic002G179700--Sobic002G315000 Sobic002G179700--Sobic002G072700 Sobic003G333000--Sobic010G107200 Sobic003G333000--Sobic005G196500 Sobic003G333000--Sobic009G154100 Sobic003G333000--Sobic002G315000 Sobic003G333000--Sobic005G209900 Sobic002G201100 Sobic002G201100 Sobic003G333000--Sobic002G201100 Sobic006G001400 Sobic006G001400 Sobic003G333000--Sobic006G001400 Sobic001G478100 Sobic001G478100 Sobic003G333000--Sobic001G478100 Sobic003G333000--Sobic005G227050 Sobic003G174900--Sobic004G199700 Sobic003G174900--Sobic002G216600 Sobic003G174900--Sobic009G259500 Sobic001G361800 Sobic001G361800 Sobic003G174900--Sobic001G361800 Sobic001G258100 Sobic001G258100 Sobic003G174900--Sobic001G258100 Sobic003G174900--Sobic005G204100 Sobic003G174900--Sobic002G348700 Sobic008G086200 Sobic008G086200 Sobic003G174900--Sobic008G086200 Sobic003G174900--Sobic004G205500 Sobic003G096300 Sobic003G096300 Sobic001G482300--Sobic003G096300 Sobic001G482300--Sobic002G315000 Sobic001G482300--Sobic003G420800 Sobic001G482300--Sobic001G047200 Sobic002G064400 Sobic002G064400 Sobic001G482300--Sobic002G064400 Sobic001G482300--Sobic005G204100 Sobic009G083300 Sobic009G083300 Sobic001G482300--Sobic009G083300 Sobic008G038200 Sobic008G038200 Sobic001G482300--Sobic008G038200 Sobic001G370000 Sobic001G370000 Sobic001G482300--Sobic001G370000 Sobic002G311000 Sobic002G311000 Sobic001G047200--Sobic002G311000 Sobic002G142500 Sobic002G142500 Sobic001G047200--Sobic002G142500 Sobic010G135300 Sobic010G135300 Sobic001G047200--Sobic010G135300 Sobic002G377300 Sobic002G377300 Sobic001G047200--Sobic002G377300 Sobic001G047200--Sobic003G096300 Sobic001G047200--Sobic001G482300 Sobic001G047200--Sobic003G420800 Sobic001G157100 Sobic001G157100 Sobic001G047200--Sobic001G157100 Sobic009G148200 Sobic009G148200 Sobic001G047200--Sobic009G148200
Octagon: transcription factors


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