Gene annotation
Transcriptome id Sobic.003G029300.1
Synonym Sb03g002750
Functional annotation lachrymatory factor synthase, putative, expressed
UniProt C5XLU2
Pfam PF10604
Panther DB PTHR33789 PTHR33789:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G25770 : Polyketide cyclase/dehydrase and lipid transport superfamily protein
RAP-DB (Rice) LOC_Os01g10210.1 : lachrymatory factor synthase, putative, expressed
MaizeGDB (Corn) Zm00025a022959
Brachypodium KQK07085 , KQK03183
Barley HORVU3Hr1G027220.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G154800 bifunctional monodehydroascorbate reductase and carbonic anhydrasenectarin-3 precursor, putative, expressed K01674: carbonic anhydrase
2 Sobic.007G123200 heavy metal-associated domain containing protein, expressed -
3 Sobic.009G102800 MRH1, putative, expressed -
4 Sobic.004G240900 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf, flower and stem, expression induced by IAA and BR treatments"(PubMedID : 20528920)@auxin efflux carrier component, putative, expressed K13947: auxin efflux carrier family protein
5 Sobic.004G193800 hydrolase, alpha/beta fold family domain containing protein, expressed K14759: isochorismate synthase / 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase / 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase / O-succinylbenzoate synthase
6 Sobic.004G151900 - -
7 Sobic.006G062400 Leucine Rich Repeat family protein, expressed -
8 Sobic.004G016500 PPR repeat domain containing protein, putative, expressed -
9 Sobic.001G046600 cycloartenol-C-24-methyltransferase 1, putative, expressed -
10 Sobic.003G176200 - -
11 Sobic.001G061600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peptidase M50, mammalian sterol-regulatory element binding protein, putative, expressed -
12 Sobic.007G090415 - -
13 Sobic.003G424100 sulfotransferase domain containing protein, expressed -
14 Sobic.001G275800 peptide transporter PTR2, putative, expressed -
15 Sobic.007G066050 - -
16 Sobic.009G251300 endonuclease, putative, expressed -
17 Sobic.003G420201 - -
18 Sobic.007G099500 hypothetical protein -
19 Sobic.003G038000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Lipase class 3 family protein (At)(PubMedID : 27208977)@phospholipase, putative, expressed -
20 Sobic.003G042100 MAR-binding filament-like protein 1, putative, expressed -


Gene co-expression network
sample Sobic003G029300 Sobic003G029300 Sobic007G154800 Sobic007G154800 Sobic003G029300--Sobic007G154800 Sobic007G123200 Sobic007G123200 Sobic003G029300--Sobic007G123200 Sobic009G102800 Sobic009G102800 Sobic003G029300--Sobic009G102800 Sobic004G240900 Sobic004G240900 Sobic003G029300--Sobic004G240900 Sobic004G193800 Sobic004G193800 Sobic003G029300--Sobic004G193800 Sobic004G151900 Sobic004G151900 Sobic003G029300--Sobic004G151900 Sobic006G062400 Sobic006G062400 Sobic003G029300--Sobic006G062400 Sobic004G016500 Sobic004G016500 Sobic003G029300--Sobic004G016500 Sobic001G046600 Sobic001G046600 Sobic003G029300--Sobic001G046600 Sobic007G154800--Sobic003G029300 Sobic007G154800--Sobic006G062400 Sobic007G154800--Sobic004G151900 Sobic007G154800--Sobic009G102800 Sobic007G066050 Sobic007G066050 Sobic007G154800--Sobic007G066050 Sobic008G176666 Sobic008G176666 Sobic007G154800--Sobic008G176666 Sobic008G176732 Sobic008G176732 Sobic007G154800--Sobic008G176732 Sobic010G144100 Sobic010G144100 Sobic007G154800--Sobic010G144100 Sobic001G061600 Sobic001G061600 Sobic007G154800--Sobic001G061600 Sobic007G123200--Sobic003G029300 Sobic003G176200 Sobic003G176200 Sobic007G123200--Sobic003G176200 Sobic001G275800 Sobic001G275800 Sobic007G123200--Sobic001G275800 Sobic008G008500 Sobic008G008500 Sobic007G123200--Sobic008G008500 Sobic007G090415 Sobic007G090415 Sobic007G123200--Sobic007G090415 Sobic005G227050 Sobic005G227050 Sobic007G123200--Sobic005G227050 Sobic007G123200--Sobic004G151900 Sobic008G130700 Sobic008G130700 Sobic007G123200--Sobic008G130700 Sobic001G358900 Sobic001G358900 Sobic007G123200--Sobic001G358900 Sobic009G102800--Sobic003G029300 Sobic009G102800--Sobic007G154800 Sobic009G102800--Sobic003G176200 Sobic009G102800--Sobic007G123200 Sobic009G064766 Sobic009G064766 Sobic009G102800--Sobic009G064766 Sobic003G420800 Sobic003G420800 Sobic009G102800--Sobic003G420800 Sobic009G102800--Sobic004G151900 Sobic001G339400 Sobic001G339400 Sobic009G102800--Sobic001G339400 Sobic008G124100 Sobic008G124100 Sobic009G102800--Sobic008G124100 Sobic003G424100 Sobic003G424100 Sobic004G240900--Sobic003G424100 Sobic006G133600 Sobic006G133600 Sobic004G240900--Sobic006G133600 Sobic004G240900--Sobic001G046600 Sobic007G099500 Sobic007G099500 Sobic004G240900--Sobic007G099500 Sobic004G240900--Sobic004G016500 Sobic009G059600 Sobic009G059600 Sobic004G240900--Sobic009G059600 Sobic004G240900--Sobic003G029300 Sobic004G240900--Sobic004G193800 Sobic004G164600 Sobic004G164600 Sobic004G240900--Sobic004G164600 Sobic003G185250 Sobic003G185250 Sobic004G193800--Sobic003G185250 Sobic004G193800--Sobic004G016500 Sobic004G193800--Sobic003G424100 Sobic008G068800 Sobic008G068800 Sobic004G193800--Sobic008G068800 Sobic004G193800--Sobic007G099500 Sobic003G023400 Sobic003G023400 Sobic004G193800--Sobic003G023400 Sobic004G193800--Sobic004G240900 Sobic010G208500 Sobic010G208500 Sobic004G193800--Sobic010G208500 Sobic004G169501 Sobic004G169501 Sobic004G193800--Sobic004G169501 Sobic008G021700 Sobic008G021700 Sobic004G151900--Sobic008G021700 Sobic009G251300 Sobic009G251300 Sobic004G151900--Sobic009G251300 Sobic004G151900--Sobic001G061600 Sobic004G151900--Sobic007G154800 Sobic004G246800 Sobic004G246800 Sobic004G151900--Sobic004G246800 Sobic004G151900--Sobic007G066050 Sobic004G151900--Sobic003G029300 Sobic001G142400 Sobic001G142400 Sobic004G151900--Sobic001G142400 Sobic004G151900--Sobic009G064766 Sobic006G062400--Sobic007G154800 Sobic006G062400--Sobic003G029300 Sobic006G062400--Sobic008G176732 Sobic006G132200 Sobic006G132200 Sobic006G062400--Sobic006G132200 Sobic006G062400--Sobic007G099500 Sobic006G062400--Sobic001G046600 Sobic006G062400--Sobic001G061600 Sobic006G062400--Sobic004G016500 Sobic006G062400--Sobic003G424100 Sobic004G016500--Sobic001G046600 Sobic002G150766 Sobic002G150766 Sobic004G016500--Sobic002G150766 Sobic002G330400 Sobic002G330400 Sobic004G016500--Sobic002G330400 Sobic008G167300 Sobic008G167300 Sobic004G016500--Sobic008G167300 Sobic004G212800 Sobic004G212800 Sobic004G016500--Sobic004G212800 Sobic003G057800 Sobic003G057800 Sobic004G016500--Sobic003G057800 Sobic001G479500 Sobic001G479500 Sobic004G016500--Sobic001G479500 Sobic004G016500--Sobic004G164600 Sobic004G016500--Sobic003G424100 Sobic001G046600--Sobic004G016500 Sobic001G046600--Sobic004G212800 Sobic001G046600--Sobic004G164600 Sobic007G073400 Sobic007G073400 Sobic001G046600--Sobic007G073400 Sobic001G046600--Sobic003G424100 Sobic004G112500 Sobic004G112500 Sobic001G046600--Sobic004G112500 Sobic001G046600--Sobic008G167300 Sobic008G157950 Sobic008G157950 Sobic001G046600--Sobic008G157950 Sobic001G046600--Sobic008G176732
Octagon: transcription factors


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