Gene annotation
Transcriptome id Sobic.003G176200.1
Synonym RTFL17, DVL4
Functional annotation -
UniProt A0A1B6Q428
Pfam PF08137
Panther DB PTHR33102
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G13245 : ROTUNDIFOLIA like 17
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley HORVU7Hr1G115330.1
Wheat -
Populus -


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cDNA sequences
Sobic.003G176200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G130700 expressed protein -
2 Sobic.007G123200 heavy metal-associated domain containing protein, expressed -
3 Sobic.001G275800 peptide transporter PTR2, putative, expressed -
4 Sobic.007G090415 - -
5 Sobic.005G121500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@dehydrogenase/reductase, putative, expressed -
6 Sobic.009G102800 MRH1, putative, expressed -
7 Sobic.003G029300 lachrymatory factor synthase, putative, expressed -
8 Sobic.008G008500 protein phosphatase 2c, putative, expressed -
9 Sobic.004G151900 - -
10 Sobic.002G190100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
11 Sobic.003G157500 oxidoreductase, 2OG-FeII oxygenase domain containing protein, putative, expressed -
12 Sobic.007G182600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@tetratricopeptide-like helical, putative, expressed -
13 Sobic.003G420800 glycerol-3-phosphate dehydrogenase, putative, expressed K00006: glycerol-3-phosphate dehydrogenase (NAD+)
14 Sobic.001G061600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peptidase M50, mammalian sterol-regulatory element binding protein, putative, expressed -
15 Sobic.005G020200 myb-like DNA-binding domain containing protein, putative, expressed K09422: transcription factor MYB, plant
16 Sobic.005G227050 - -
17 Sobic.001G228300 SAP domain containing protein, expressed -
18 Sobic.009G055900 fasciclin-like arabinogalactan protein 8 precursor, putative, expressed -
19 Sobic.006G001400 Leucine Rich Repeat family protein, expressed -
20 Sobic.007G154800 bifunctional monodehydroascorbate reductase and carbonic anhydrasenectarin-3 precursor, putative, expressed K01674: carbonic anhydrase


Gene co-expression network
sample Sobic003G176200 Sobic003G176200 Sobic008G130700 Sobic008G130700 Sobic003G176200--Sobic008G130700 Sobic007G123200 Sobic007G123200 Sobic003G176200--Sobic007G123200 Sobic001G275800 Sobic001G275800 Sobic003G176200--Sobic001G275800 Sobic007G090415 Sobic007G090415 Sobic003G176200--Sobic007G090415 Sobic005G121500 Sobic005G121500 Sobic003G176200--Sobic005G121500 Sobic009G102800 Sobic009G102800 Sobic003G176200--Sobic009G102800 Sobic003G029300 Sobic003G029300 Sobic003G176200--Sobic003G029300 Sobic008G008500 Sobic008G008500 Sobic003G176200--Sobic008G008500 Sobic004G151900 Sobic004G151900 Sobic003G176200--Sobic004G151900 Sobic008G130700--Sobic007G090415 Sobic002G190100 Sobic002G190100 Sobic008G130700--Sobic002G190100 Sobic006G025700 Sobic006G025700 Sobic008G130700--Sobic006G025700 Sobic003G157500 Sobic003G157500 Sobic008G130700--Sobic003G157500 Sobic008G130700--Sobic003G176200 Sobic005G020200 Sobic005G020200 Sobic008G130700--Sobic005G020200 Sobic005G141000 Sobic005G141000 Sobic008G130700--Sobic005G141000 Sobic008G130700--Sobic008G008500 Sobic001G215300 Sobic001G215300 Sobic008G130700--Sobic001G215300 Sobic007G123200--Sobic003G029300 Sobic007G123200--Sobic003G176200 Sobic007G123200--Sobic001G275800 Sobic007G123200--Sobic008G008500 Sobic007G123200--Sobic007G090415 Sobic005G227050 Sobic005G227050 Sobic007G123200--Sobic005G227050 Sobic007G123200--Sobic004G151900 Sobic007G123200--Sobic008G130700 Sobic001G358900 Sobic001G358900 Sobic007G123200--Sobic001G358900 Sobic005G203600 Sobic005G203600 Sobic001G275800--Sobic005G203600 Sobic001G275800--Sobic007G090415 Sobic001G275800--Sobic007G123200 Sobic001G229500 Sobic001G229500 Sobic001G275800--Sobic001G229500 Sobic001G275800--Sobic008G130700 Sobic001G275800--Sobic005G020200 Sobic005G218100 Sobic005G218100 Sobic001G275800--Sobic005G218100 Sobic001G275800--Sobic003G176200 Sobic006G001400 Sobic006G001400 Sobic001G275800--Sobic006G001400 Sobic007G090415--Sobic008G130700 Sobic007G090415--Sobic001G275800 Sobic007G090415--Sobic005G141000 Sobic007G090415--Sobic005G203600 Sobic007G090415--Sobic002G190100 Sobic007G090415--Sobic005G020200 Sobic007G090415--Sobic007G123200 Sobic007G090415--Sobic008G008500 Sobic007G090415--Sobic001G215300 Sobic005G121500--Sobic003G176200 Sobic005G121500--Sobic007G123200 Sobic005G121500--Sobic001G358900 Sobic005G121500--Sobic008G130700 Sobic005G121500--Sobic005G203600 Sobic005G121500--Sobic007G090415 Sobic005G121500--Sobic001G275800 Sobic005G121500--Sobic003G029300 Sobic005G121500--Sobic005G020200 Sobic009G102800--Sobic003G029300 Sobic007G154800 Sobic007G154800 Sobic009G102800--Sobic007G154800 Sobic009G102800--Sobic003G176200 Sobic009G102800--Sobic007G123200 Sobic009G064766 Sobic009G064766 Sobic009G102800--Sobic009G064766 Sobic003G420800 Sobic003G420800 Sobic009G102800--Sobic003G420800 Sobic009G102800--Sobic004G151900 Sobic001G339400 Sobic001G339400 Sobic009G102800--Sobic001G339400 Sobic008G124100 Sobic008G124100 Sobic009G102800--Sobic008G124100 Sobic003G029300--Sobic007G154800 Sobic003G029300--Sobic007G123200 Sobic003G029300--Sobic009G102800 Sobic004G240900 Sobic004G240900 Sobic003G029300--Sobic004G240900 Sobic004G193800 Sobic004G193800 Sobic003G029300--Sobic004G193800 Sobic003G029300--Sobic004G151900 Sobic006G062400 Sobic006G062400 Sobic003G029300--Sobic006G062400 Sobic004G016500 Sobic004G016500 Sobic003G029300--Sobic004G016500 Sobic001G046600 Sobic001G046600 Sobic003G029300--Sobic001G046600 Sobic002G064400 Sobic002G064400 Sobic008G008500--Sobic002G064400 Sobic009G083300 Sobic009G083300 Sobic008G008500--Sobic009G083300 Sobic008G008500--Sobic007G123200 Sobic008G008500--Sobic008G130700 Sobic008G008500--Sobic002G190100 Sobic008G008500--Sobic007G090415 Sobic001G142400 Sobic001G142400 Sobic008G008500--Sobic001G142400 Sobic003G071600 Sobic003G071600 Sobic008G008500--Sobic003G071600 Sobic006G060500 Sobic006G060500 Sobic008G008500--Sobic006G060500 Sobic008G021700 Sobic008G021700 Sobic004G151900--Sobic008G021700 Sobic009G251300 Sobic009G251300 Sobic004G151900--Sobic009G251300 Sobic001G061600 Sobic001G061600 Sobic004G151900--Sobic001G061600 Sobic004G151900--Sobic007G154800 Sobic004G246800 Sobic004G246800 Sobic004G151900--Sobic004G246800 Sobic007G066050 Sobic007G066050 Sobic004G151900--Sobic007G066050 Sobic004G151900--Sobic003G029300 Sobic004G151900--Sobic001G142400 Sobic004G151900--Sobic009G064766
Octagon: transcription factors


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