Gene annotation
Transcriptome id Sobic.007G123200.1
Synonym Sb07g020020
Functional annotation heavy metal-associated domain containing protein, expressed
UniProt C5YKS8
Pfam PF00403
Panther DB PTHR22814 PTHR22814:SF103
NCBI CDD KOG1603; Copper chaperone
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G39700 : Heavy metal transport/detoxification superfamily protein
RAP-DB (Rice) LOC_Os08g31140.1 : heavy metal-associated domain containing protein, expressed
MaizeGDB (Corn) Zm00025a006057
Brachypodium -
Barley -
Wheat TraesCS4D02G102000 , TraesCS4A02G211400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G029300 lachrymatory factor synthase, putative, expressed -
2 Sobic.003G176200 - -
3 Sobic.001G275800 peptide transporter PTR2, putative, expressed -
4 Sobic.008G008500 protein phosphatase 2c, putative, expressed -
5 Sobic.007G090415 - -
6 Sobic.005G227050 - -
7 Sobic.004G151900 - -
8 Sobic.008G130700 expressed protein -
9 Sobic.001G358900 myb-like DNA-binding domain containing protein, putative, expressed K09422: transcription factor MYB, plant
10 Sobic.005G121500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@dehydrogenase/reductase, putative, expressed -
11 Sobic.009G102800 MRH1, putative, expressed -
12 Sobic.007G210900 expressed protein -
13 Sobic.007G154800 bifunctional monodehydroascorbate reductase and carbonic anhydrasenectarin-3 precursor, putative, expressed K01674: carbonic anhydrase
14 Sobic.004G240900 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf, flower and stem, expression induced by IAA and BR treatments"(PubMedID : 20528920)@auxin efflux carrier component, putative, expressed K13947: auxin efflux carrier family protein
15 Sobic.005G203600 - -
16 Sobic.001G142400 RIO1 family protein, expressed -
17 Sobic.004G298400 WRKY36, expressed -
18 Sobic.003G420800 glycerol-3-phosphate dehydrogenase, putative, expressed K00006: glycerol-3-phosphate dehydrogenase (NAD+)
19 Sobic.004G143400 - -
20 Sobic.002G179700 3-ketoacyl-CoA synthase precursor, putative, expressed K15397: 3-ketoacyl-CoA synthase


Gene co-expression network
sample Sobic007G123200 Sobic007G123200 Sobic003G029300 Sobic003G029300 Sobic007G123200--Sobic003G029300 Sobic003G176200 Sobic003G176200 Sobic007G123200--Sobic003G176200 Sobic001G275800 Sobic001G275800 Sobic007G123200--Sobic001G275800 Sobic008G008500 Sobic008G008500 Sobic007G123200--Sobic008G008500 Sobic007G090415 Sobic007G090415 Sobic007G123200--Sobic007G090415 Sobic005G227050 Sobic005G227050 Sobic007G123200--Sobic005G227050 Sobic004G151900 Sobic004G151900 Sobic007G123200--Sobic004G151900 Sobic008G130700 Sobic008G130700 Sobic007G123200--Sobic008G130700 Sobic001G358900 Sobic001G358900 Sobic007G123200--Sobic001G358900 Sobic007G154800 Sobic007G154800 Sobic003G029300--Sobic007G154800 Sobic003G029300--Sobic007G123200 Sobic009G102800 Sobic009G102800 Sobic003G029300--Sobic009G102800 Sobic004G240900 Sobic004G240900 Sobic003G029300--Sobic004G240900 Sobic004G193800 Sobic004G193800 Sobic003G029300--Sobic004G193800 Sobic003G029300--Sobic004G151900 Sobic006G062400 Sobic006G062400 Sobic003G029300--Sobic006G062400 Sobic004G016500 Sobic004G016500 Sobic003G029300--Sobic004G016500 Sobic001G046600 Sobic001G046600 Sobic003G029300--Sobic001G046600 Sobic003G176200--Sobic008G130700 Sobic003G176200--Sobic007G123200 Sobic003G176200--Sobic001G275800 Sobic003G176200--Sobic007G090415 Sobic005G121500 Sobic005G121500 Sobic003G176200--Sobic005G121500 Sobic003G176200--Sobic009G102800 Sobic003G176200--Sobic003G029300 Sobic003G176200--Sobic008G008500 Sobic003G176200--Sobic004G151900 Sobic005G203600 Sobic005G203600 Sobic001G275800--Sobic005G203600 Sobic001G275800--Sobic007G090415 Sobic001G275800--Sobic007G123200 Sobic001G229500 Sobic001G229500 Sobic001G275800--Sobic001G229500 Sobic001G275800--Sobic008G130700 Sobic005G020200 Sobic005G020200 Sobic001G275800--Sobic005G020200 Sobic005G218100 Sobic005G218100 Sobic001G275800--Sobic005G218100 Sobic001G275800--Sobic003G176200 Sobic006G001400 Sobic006G001400 Sobic001G275800--Sobic006G001400 Sobic002G064400 Sobic002G064400 Sobic008G008500--Sobic002G064400 Sobic009G083300 Sobic009G083300 Sobic008G008500--Sobic009G083300 Sobic008G008500--Sobic007G123200 Sobic008G008500--Sobic008G130700 Sobic002G190100 Sobic002G190100 Sobic008G008500--Sobic002G190100 Sobic008G008500--Sobic007G090415 Sobic001G142400 Sobic001G142400 Sobic008G008500--Sobic001G142400 Sobic003G071600 Sobic003G071600 Sobic008G008500--Sobic003G071600 Sobic006G060500 Sobic006G060500 Sobic008G008500--Sobic006G060500 Sobic007G090415--Sobic008G130700 Sobic007G090415--Sobic001G275800 Sobic005G141000 Sobic005G141000 Sobic007G090415--Sobic005G141000 Sobic007G090415--Sobic005G203600 Sobic007G090415--Sobic002G190100 Sobic007G090415--Sobic005G020200 Sobic007G090415--Sobic007G123200 Sobic007G090415--Sobic008G008500 Sobic001G215300 Sobic001G215300 Sobic007G090415--Sobic001G215300 Sobic005G209900 Sobic005G209900 Sobic005G227050--Sobic005G209900 Sobic005G196500 Sobic005G196500 Sobic005G227050--Sobic005G196500 Sobic009G154100 Sobic009G154100 Sobic005G227050--Sobic009G154100 Sobic002G179700 Sobic002G179700 Sobic005G227050--Sobic002G179700 Sobic001G356400 Sobic001G356400 Sobic005G227050--Sobic001G356400 Sobic010G107200 Sobic010G107200 Sobic005G227050--Sobic010G107200 Sobic005G227050--Sobic006G001400 Sobic007G103800 Sobic007G103800 Sobic005G227050--Sobic007G103800 Sobic005G227050--Sobic007G123200 Sobic008G021700 Sobic008G021700 Sobic004G151900--Sobic008G021700 Sobic009G251300 Sobic009G251300 Sobic004G151900--Sobic009G251300 Sobic001G061600 Sobic001G061600 Sobic004G151900--Sobic001G061600 Sobic004G151900--Sobic007G154800 Sobic004G246800 Sobic004G246800 Sobic004G151900--Sobic004G246800 Sobic007G066050 Sobic007G066050 Sobic004G151900--Sobic007G066050 Sobic004G151900--Sobic003G029300 Sobic004G151900--Sobic001G142400 Sobic009G064766 Sobic009G064766 Sobic004G151900--Sobic009G064766 Sobic008G130700--Sobic007G090415 Sobic008G130700--Sobic002G190100 Sobic006G025700 Sobic006G025700 Sobic008G130700--Sobic006G025700 Sobic003G157500 Sobic003G157500 Sobic008G130700--Sobic003G157500 Sobic008G130700--Sobic003G176200 Sobic008G130700--Sobic005G020200 Sobic008G130700--Sobic005G141000 Sobic008G130700--Sobic008G008500 Sobic008G130700--Sobic001G215300 Sobic001G358900--Sobic007G123200 Sobic001G358900--Sobic005G121500 Sobic007G210900 Sobic007G210900 Sobic001G358900--Sobic007G210900 Sobic001G358900--Sobic005G227050 Sobic002G300100 Sobic002G300100 Sobic001G358900--Sobic002G300100 Sobic001G358900--Sobic008G008500 Sobic001G358900--Sobic006G001400 Sobic001G358900--Sobic006G060500 Sobic009G196200 Sobic009G196200 Sobic001G358900--Sobic009G196200
Octagon: transcription factors


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