Gene annotation
Transcriptome id Sobic.003G042100.2,Sobic.003G042100.3,Sobic.003G042100.4,Sobic.003G042100.5
Synonym MFP1
Functional annotation MAR-binding filament-like protein 1, putative, expressed
UniProt A0A1W0VVN1 , A0A1W0VVN8 , A0A1W0VVQ9
Pfam -
Panther DB PTHR13140 PTHR13140:SF460
NCBI CDD KOG0978; E3 ubiquitin ligase involved in syntaxin degradation
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G16000 : MAR binding filament-like protein 1
RAP-DB (Rice) LOC_Os01g08510.1 : MAR-binding filament-like protein 1, putative, expressed
MaizeGDB (Corn) Zm00025a023163
Brachypodium KQK03030
Barley HORVU3Hr1G021660.1 , HORVU3Hr1G021660.2 , HORVU3Hr1G021660.3 , HORVU3Hr1G021660.4 , HORVU3Hr1G021660.5 , HORVU3Hr1G021660.6 , HORVU3Hr1G021660.7 , HORVU3Hr1G021660.8
Wheat TraesCS3D02G119600 , TraesCS3D02G119600 , TraesCS3D02G119600 , TraesCS3D02G119600 , TraesCS3A02G117800 , TraesCS3A02G117800 , TraesCS3B02G137100 , TraesCS3B02G137100 , TraesCS3B02G137100
Populus -


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cDNA sequences
Sobic.003G042100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G061600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peptidase M50, mammalian sterol-regulatory element binding protein, putative, expressed -
2 Sobic.008G021700 peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed -
3 Sobic.001G215300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aminotransferase, classes I and II, domain containing protein, expressed -
4 Sobic.001G236800 tRNA methyltransferase, putative, expressed K00927: PGK, phosphoglycerate kinase
5 Sobic.004G193800 hydrolase, alpha/beta fold family domain containing protein, expressed K14759: isochorismate synthase / 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase / 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase / O-succinylbenzoate synthase
6 Sobic.008G008500 protein phosphatase 2c, putative, expressed -
7 Sobic.003G029300 lachrymatory factor synthase, putative, expressed -
8 Sobic.009G251300 endonuclease, putative, expressed -
9 Sobic.007G154800 bifunctional monodehydroascorbate reductase and carbonic anhydrasenectarin-3 precursor, putative, expressed K01674: carbonic anhydrase
10 Sobic.004G151900 - -
11 Sobic.007G090415 - -
12 Sobic.001G142400 RIO1 family protein, expressed -
13 Sobic.007G206100 mTERF domain containing protein, expressed K15032: mTERF domain-containing protein, mitochondrial
14 Sobic.004G044100 expressed protein -
15 Sobic.005G077933 - -
16 Sobic.001G441200 translocase of chloroplast 34, putative, expressed -
17 Sobic.007G123200 heavy metal-associated domain containing protein, expressed -
18 Sobic.008G107100 cytochrome P450, putative, expressed -
19 Sobic.003G185250 - -
20 Sobic.007G013000 transferase family protein, putative, expressed -


Gene co-expression network
sample Sobic003G042100 Sobic003G042100 Sobic001G061600 Sobic001G061600 Sobic003G042100--Sobic001G061600 Sobic008G021700 Sobic008G021700 Sobic003G042100--Sobic008G021700 Sobic001G215300 Sobic001G215300 Sobic003G042100--Sobic001G215300 Sobic001G236800 Sobic001G236800 Sobic003G042100--Sobic001G236800 Sobic004G193800 Sobic004G193800 Sobic003G042100--Sobic004G193800 Sobic008G008500 Sobic008G008500 Sobic003G042100--Sobic008G008500 Sobic003G029300 Sobic003G029300 Sobic003G042100--Sobic003G029300 Sobic009G251300 Sobic009G251300 Sobic003G042100--Sobic009G251300 Sobic007G154800 Sobic007G154800 Sobic003G042100--Sobic007G154800 Sobic004G151900 Sobic004G151900 Sobic001G061600--Sobic004G151900 Sobic001G061600--Sobic003G042100 Sobic006G062400 Sobic006G062400 Sobic001G061600--Sobic006G062400 Sobic001G061600--Sobic007G154800 Sobic007G182600 Sobic007G182600 Sobic001G061600--Sobic007G182600 Sobic001G061600--Sobic008G021700 Sobic001G164200 Sobic001G164200 Sobic001G061600--Sobic001G164200 Sobic001G061600--Sobic003G029300 Sobic002G232500 Sobic002G232500 Sobic001G061600--Sobic002G232500 Sobic008G021700--Sobic004G151900 Sobic008G021700--Sobic009G251300 Sobic005G022800 Sobic005G022800 Sobic008G021700--Sobic005G022800 Sobic004G246800 Sobic004G246800 Sobic008G021700--Sobic004G246800 Sobic001G076200 Sobic001G076200 Sobic008G021700--Sobic001G076200 Sobic002G209600 Sobic002G209600 Sobic008G021700--Sobic002G209600 Sobic001G142400 Sobic001G142400 Sobic008G021700--Sobic001G142400 Sobic005G077933 Sobic005G077933 Sobic008G021700--Sobic005G077933 Sobic008G021700--Sobic001G061600 Sobic004G109000 Sobic004G109000 Sobic001G215300--Sobic004G109000 Sobic001G215300--Sobic001G142400 Sobic002G064400 Sobic002G064400 Sobic001G215300--Sobic002G064400 Sobic002G190100 Sobic002G190100 Sobic001G215300--Sobic002G190100 Sobic008G130700 Sobic008G130700 Sobic001G215300--Sobic008G130700 Sobic001G215300--Sobic001G236800 Sobic001G188600 Sobic001G188600 Sobic001G215300--Sobic001G188600 Sobic007G090415 Sobic007G090415 Sobic001G215300--Sobic007G090415 Sobic006G114300 Sobic006G114300 Sobic001G215300--Sobic006G114300 Sobic004G015700 Sobic004G015700 Sobic001G236800--Sobic004G015700 Sobic001G236800--Sobic002G064400 Sobic001G236800--Sobic001G142400 Sobic001G236800--Sobic001G215300 Sobic007G206100 Sobic007G206100 Sobic001G236800--Sobic007G206100 Sobic001G236800--Sobic008G008500 Sobic001G236800--Sobic004G151900 Sobic001G236800--Sobic004G246800 Sobic010G157700 Sobic010G157700 Sobic001G236800--Sobic010G157700 Sobic003G185250 Sobic003G185250 Sobic004G193800--Sobic003G185250 Sobic004G016500 Sobic004G016500 Sobic004G193800--Sobic004G016500 Sobic003G424100 Sobic003G424100 Sobic004G193800--Sobic003G424100 Sobic008G068800 Sobic008G068800 Sobic004G193800--Sobic008G068800 Sobic007G099500 Sobic007G099500 Sobic004G193800--Sobic007G099500 Sobic003G023400 Sobic003G023400 Sobic004G193800--Sobic003G023400 Sobic004G240900 Sobic004G240900 Sobic004G193800--Sobic004G240900 Sobic010G208500 Sobic010G208500 Sobic004G193800--Sobic010G208500 Sobic004G169501 Sobic004G169501 Sobic004G193800--Sobic004G169501 Sobic008G008500--Sobic002G064400 Sobic009G083300 Sobic009G083300 Sobic008G008500--Sobic009G083300 Sobic007G123200 Sobic007G123200 Sobic008G008500--Sobic007G123200 Sobic008G008500--Sobic008G130700 Sobic008G008500--Sobic002G190100 Sobic008G008500--Sobic007G090415 Sobic008G008500--Sobic001G142400 Sobic003G071600 Sobic003G071600 Sobic008G008500--Sobic003G071600 Sobic006G060500 Sobic006G060500 Sobic008G008500--Sobic006G060500 Sobic003G029300--Sobic007G154800 Sobic003G029300--Sobic007G123200 Sobic009G102800 Sobic009G102800 Sobic003G029300--Sobic009G102800 Sobic003G029300--Sobic004G240900 Sobic003G029300--Sobic004G193800 Sobic003G029300--Sobic004G151900 Sobic003G029300--Sobic006G062400 Sobic003G029300--Sobic004G016500 Sobic001G046600 Sobic001G046600 Sobic003G029300--Sobic001G046600 Sobic009G251300--Sobic004G151900 Sobic009G251300--Sobic008G021700 Sobic002G330400 Sobic002G330400 Sobic009G251300--Sobic002G330400 Sobic003G163100 Sobic003G163100 Sobic009G251300--Sobic003G163100 Sobic009G251300--Sobic002G209600 Sobic009G251300--Sobic004G016500 Sobic009G251300--Sobic001G046600 Sobic009G251300--Sobic005G077933 Sobic006G191400 Sobic006G191400 Sobic009G251300--Sobic006G191400 Sobic007G154800--Sobic003G029300 Sobic007G154800--Sobic006G062400 Sobic007G154800--Sobic004G151900 Sobic007G154800--Sobic009G102800 Sobic007G066050 Sobic007G066050 Sobic007G154800--Sobic007G066050 Sobic008G176666 Sobic008G176666 Sobic007G154800--Sobic008G176666 Sobic008G176732 Sobic008G176732 Sobic007G154800--Sobic008G176732 Sobic010G144100 Sobic010G144100 Sobic007G154800--Sobic010G144100 Sobic007G154800--Sobic001G061600
Octagon: transcription factors


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