Gene annotation
Transcriptome id Sobic.010G202700.1,Sobic.010G202700.2,Sobic.010G202700.4,Sobic.010G202700.3
Synonym RAP2.7, Sb10g025053, TOE1
Functional annotation AP2 domain containing protein, expressed
UniProt A0A194YKH2 , A0A1W0VU14 , A0A1W0VTZ7 , A0A1W0VU22
Pfam PF00847
Panther DB PTHR32467 PTHR32467:SF9
NCBI CDD -
KEGG Orthology K09284; AP2-like factor, euAP2 lineage
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity GO:0007275multicellular organism development


Orthologs (automatic annotation)
TAIR AT4G36920 : related to AP2.7,Integrase-type DNA-binding superfamily protein
RAP-DB (Rice) LOC_Os06g43220.1,LOC_Os03g60430.2 : AP2 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a040764 , Zm00025a051421
Brachypodium PNT71968 , PNT71965 , PNT71964 , PNT71967 , PNT71966 , PNT71963 , KQK16746 , KQK07822 , KQK07823 , KQK07820 , KQK07821 , KQJ84987 , KQJ84985 , PNT75334
Barley HORVU2Hr1G113880.22 , HORVU2Hr1G113880.23 , HORVU2Hr1G113880.21 , HORVU7Hr1G116220.11 , HORVU7Hr1G116220.10 , HORVU7Hr1G116220.13 , HORVU7Hr1G116220.12 , HORVU7Hr1G116220.15 , HORVU7Hr1G116220.14 , HORVU7Hr1G116220.17 , HORVU7Hr1G116220.16 , HORVU2Hr1G113880.11 , HORVU1Hr1G011800.30 , HORVU2Hr1G113880.4 , HORVU7Hr1G116220.9 , HORVU7Hr1G116220.6 , HORVU1Hr1G011800.26 , HORVU7Hr1G116220.8 , HORVU7Hr1G116220.5 , HORVU7Hr1G116220.4 , HORVU7Hr1G116220.7 , HORVU7Hr1G116220.3 , HORVU7Hr1G116220.2 , HORVU1Hr1G011800.20 , HORVU1Hr1G011800.21 , HORVU1Hr1G011800.22 , HORVU1Hr1G011800.23 , HORVU1Hr1G011800.24 , HORVU1Hr1G011800.27 , HORVU1Hr1G011800.28 , HORVU1Hr1G011800.29 , HORVU1Hr1G011800.25 , HORVU1Hr1G011800.15 , HORVU1Hr1G011800.14 , HORVU1Hr1G011800.13 , HORVU1Hr1G011800.12 , HORVU1Hr1G011800.19 , HORVU1Hr1G011800.1 , HORVU1Hr1G011800.3 , HORVU1Hr1G011800.2 , HORVU1Hr1G011800.5 , HORVU1Hr1G011800.4 , HORVU1Hr1G011800.7 , HORVU1Hr1G011800.6 , HORVU1Hr1G011800.9 , HORVU1Hr1G011800.8 , HORVU1Hr1G011800.11
Wheat TraesCS2D02G515800 , TraesCS1D02G059200 , TraesCS1B02G076300 , TraesCS1B02G076300 , TraesCS1B02G076300 , TraesCS2B02G542400 , TraesCS2B02G542400 , TraesCS2A02G514200 , TraesCS1D02G059200 , TraesCS1D02G059200 , TraesCS1D02G059200 , TraesCS7D02G512600 , TraesCS7B02G440400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G001400 Leucine Rich Repeat family protein, expressed -
2 Sobic.005G196500 embryogenesis transmembrane protein, putative, expressed -
3 Sobic.007G037700 expressed protein -
4 Sobic.006G233600 Homologous to EPF/EPFL genes in Arabidopsis. Modelling of protein structure.(PubMedID : 23755192)@expressed protein -
5 Sobic.001G188600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Rf1, mitochondrial precursor, putative, expressed -
6 Sobic.006G147500 DUF640 domain containing protein, putative, expressed -
7 Sobic.010G107200 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
8 Sobic.001G172300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@kinase, pfkB family, putative, expressed -
9 Sobic.001G275800 peptide transporter PTR2, putative, expressed -
10 Sobic.005G020200 myb-like DNA-binding domain containing protein, putative, expressed K09422: transcription factor MYB, plant
11 Sobic.010G143300 carboxyl-terminal peptidase, putative, expressed -
12 Sobic.004G001200 GDSL-like lipase/acylhydrolase, putative, expressed -
13 Sobic.009G196200 myosin heavy chain-related, putative, expressed -
14 Sobic.001G229500 cytochrome P450, putative, expressed -
15 Sobic.007G142300 expressed protein -
16 Sobic.001G478100 aspartic proteinase nepenthesin precursor, putative, expressed -
17 Sobic.005G141000 plant protein of unknown function domain containing protein, expressed -
18 Sobic.002G102700 cytochrome P450, putative, expressed -
19 Sobic.002G201100 ZF-HD protein dimerisation region containing protein, expressed -
20 Sobic.007G166600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@copper/zinc superoxide dismutase, putative, expressed K04565: superoxide dismutase, Cu-Zn family


Gene co-expression network
sample Sobic010G202700 Sobic010G202700 Sobic006G001400 Sobic006G001400 Sobic010G202700--Sobic006G001400 Sobic005G196500 Sobic005G196500 Sobic010G202700--Sobic005G196500 Sobic007G037700 Sobic007G037700 Sobic010G202700--Sobic007G037700 Sobic006G233600 Sobic006G233600 Sobic010G202700--Sobic006G233600 Sobic001G188600 Sobic001G188600 Sobic010G202700--Sobic001G188600 Sobic006G147500 Sobic006G147500 Sobic010G202700--Sobic006G147500 Sobic010G107200 Sobic010G107200 Sobic010G202700--Sobic010G107200 Sobic001G172300 Sobic001G172300 Sobic010G202700--Sobic001G172300 Sobic001G275800 Sobic001G275800 Sobic010G202700--Sobic001G275800 Sobic006G001400--Sobic005G196500 Sobic004G001200 Sobic004G001200 Sobic006G001400--Sobic004G001200 Sobic009G059100 Sobic009G059100 Sobic006G001400--Sobic009G059100 Sobic005G020200 Sobic005G020200 Sobic006G001400--Sobic005G020200 Sobic010G124200 Sobic010G124200 Sobic006G001400--Sobic010G124200 Sobic003G157500 Sobic003G157500 Sobic006G001400--Sobic003G157500 Sobic006G001400--Sobic006G233600 Sobic006G172700 Sobic006G172700 Sobic006G001400--Sobic006G172700 Sobic005G056201 Sobic005G056201 Sobic006G001400--Sobic005G056201 Sobic005G196500--Sobic006G001400 Sobic005G196500--Sobic006G233600 Sobic005G209900 Sobic005G209900 Sobic005G196500--Sobic005G209900 Sobic005G196500--Sobic010G107200 Sobic005G227050 Sobic005G227050 Sobic005G196500--Sobic005G227050 Sobic007G142300 Sobic007G142300 Sobic005G196500--Sobic007G142300 Sobic005G196500--Sobic004G001200 Sobic003G333000 Sobic003G333000 Sobic005G196500--Sobic003G333000 Sobic004G291500 Sobic004G291500 Sobic005G196500--Sobic004G291500 Sobic007G037700--Sobic006G001400 Sobic007G037700--Sobic005G196500 Sobic007G037700--Sobic010G202700 Sobic007G037700--Sobic001G275800 Sobic007G037700--Sobic006G233600 Sobic007G037700--Sobic005G209900 Sobic009G196200 Sobic009G196200 Sobic007G037700--Sobic009G196200 Sobic007G090415 Sobic007G090415 Sobic007G037700--Sobic007G090415 Sobic007G037700--Sobic010G124200 Sobic006G233600--Sobic005G196500 Sobic006G233600--Sobic010G107200 Sobic001G478100 Sobic001G478100 Sobic006G233600--Sobic001G478100 Sobic006G233600--Sobic005G209900 Sobic006G032800 Sobic006G032800 Sobic006G233600--Sobic006G032800 Sobic006G233600--Sobic006G001400 Sobic006G233600--Sobic007G142300 Sobic009G154100 Sobic009G154100 Sobic006G233600--Sobic009G154100 Sobic007G012800 Sobic007G012800 Sobic006G233600--Sobic007G012800 Sobic001G069500 Sobic001G069500 Sobic001G188600--Sobic001G069500 Sobic006G114300 Sobic006G114300 Sobic001G188600--Sobic006G114300 Sobic001G357200 Sobic001G357200 Sobic001G188600--Sobic001G357200 Sobic009G098100 Sobic009G098100 Sobic001G188600--Sobic009G098100 Sobic010G012900 Sobic010G012900 Sobic001G188600--Sobic010G012900 Sobic004G109000 Sobic004G109000 Sobic001G188600--Sobic004G109000 Sobic007G211100 Sobic007G211100 Sobic001G188600--Sobic007G211100 Sobic004G253800 Sobic004G253800 Sobic001G188600--Sobic004G253800 Sobic008G030000 Sobic008G030000 Sobic001G188600--Sobic008G030000 Sobic002G102700 Sobic002G102700 Sobic006G147500--Sobic002G102700 Sobic006G147500--Sobic001G188600 Sobic002G020100 Sobic002G020100 Sobic006G147500--Sobic002G020100 Sobic006G147500--Sobic007G211100 Sobic006G147500--Sobic010G202700 Sobic006G147500--Sobic001G069500 Sobic008G067400 Sobic008G067400 Sobic006G147500--Sobic008G067400 Sobic006G147500--Sobic004G109000 Sobic003G068300 Sobic003G068300 Sobic006G147500--Sobic003G068300 Sobic010G107200--Sobic005G209900 Sobic010G107200--Sobic005G196500 Sobic010G107200--Sobic006G233600 Sobic010G107200--Sobic009G154100 Sobic010G107200--Sobic006G032800 Sobic010G107200--Sobic007G142300 Sobic001G389600 Sobic001G389600 Sobic010G107200--Sobic001G389600 Sobic010G107200--Sobic001G478100 Sobic005G147800 Sobic005G147800 Sobic010G107200--Sobic005G147800 Sobic001G172300--Sobic010G012900 Sobic001G347800 Sobic001G347800 Sobic001G172300--Sobic001G347800 Sobic003G392000 Sobic003G392000 Sobic001G172300--Sobic003G392000 Sobic001G172300--Sobic001G188600 Sobic002G190800 Sobic002G190800 Sobic001G172300--Sobic002G190800 Sobic001G172300--Sobic006G114300 Sobic002G360200 Sobic002G360200 Sobic001G172300--Sobic002G360200 Sobic001G172300--Sobic001G357200 Sobic001G172300--Sobic004G253800 Sobic005G203600 Sobic005G203600 Sobic001G275800--Sobic005G203600 Sobic001G275800--Sobic007G090415 Sobic007G123200 Sobic007G123200 Sobic001G275800--Sobic007G123200 Sobic001G229500 Sobic001G229500 Sobic001G275800--Sobic001G229500 Sobic008G130700 Sobic008G130700 Sobic001G275800--Sobic008G130700 Sobic001G275800--Sobic005G020200 Sobic005G218100 Sobic005G218100 Sobic001G275800--Sobic005G218100 Sobic003G176200 Sobic003G176200 Sobic001G275800--Sobic003G176200 Sobic001G275800--Sobic006G001400
Octagon: transcription factors


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