Gene annotation
Transcriptome id Sobic.002G072700.1,Sobic.002G072700.2
Synonym Sb02g006130
Functional annotation carboxyl-terminal peptidase, putative, expressed
UniProt A0A1W0W2U6 , C5XCP7
Pfam PF03080 PF14365 PF14365 PF03080
Panther DB PTHR31589 PTHR31589:SF16 PTHR31589:SF16 PTHR31589
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G55360 : Protein of Unknown Function (DUF239)
RAP-DB (Rice) LOC_Os07g10530.1 : carboxyl-terminal peptidase, putative, expressed
MaizeGDB (Corn) Zm00025a008658 , Zm00025a045353 , Zm00025a048469
Brachypodium KQK20412 , KQK12586
Barley HORVU5Hr1G109680.5 , HORVU5Hr1G109680.4 , HORVU5Hr1G109680.7 , HORVU5Hr1G109680.6 , HORVU5Hr1G109680.1 , HORVU5Hr1G109680.3 , HORVU5Hr1G109680.2 , HORVU2Hr1G037700.1 , HORVU2Hr1G037700.11 , HORVU2Hr1G037700.10 , HORVU2Hr1G037700.9 , HORVU2Hr1G037700.8 , HORVU2Hr1G037700.3 , HORVU2Hr1G037700.2 , HORVU2Hr1G037700.5 , HORVU2Hr1G037700.4 , HORVU2Hr1G037700.7 , HORVU2Hr1G037700.6
Wheat TraesCS5B02G466200 , TraesCS5A02G457200 , TraesCS5D02G468000 , TraesCS2D02G203000 , TraesCS2D02G203000 , TraesCS2A02G184700 , TraesCS2B02G222700
Populus -


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cDNA sequences
Sobic.002G072700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G189400 BEE 1, putative, expressed -
2 Sobic.001G228100 gene responsible for epi-cuticular wax accumulation in sorghum.(PubMedID : 29379518)@GDSL-like lipase/acylhydrolase, putative, expressed -
3 Sobic.005G029700 BTBA6 - Bric-a-Brac,Tramtrack, Broad Complex BTB domain with Ankyrin repeat region, expressed K14508: regulatory protein NPR1
4 Sobic.005G204100 kelch repeat protein, putative, expressed -
5 Sobic.002G139800 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
6 Sobic.007G142900 receptor-like kinase, putative, expressed -
7 Sobic.001G221900 3-ketoacyl-CoA synthase precursor, putative, expressed K15397: 3-ketoacyl-CoA synthase
8 Sobic.009G259500 receptor protein kinase CLAVATA1 precursor, putative, expressed -
9 Sobic.006G247700 Highest expression level in primordial inflorescence(PubMedID : 27501690)@-(PubMedID : 23108465)@OsSPL8 - SBP-box gene family member, expressed -
10 Sobic.001G356400 expansin precursor, putative, expressed -
11 Sobic.009G254500 protein kinase, putative, expressed -
12 Sobic.001G267800 thaumatin-like protein 1 precursor, putative, expressed -
13 Sobic.004G259101 - -
14 Sobic.009G154100 expressed protein -
15 Sobic.003G300200 expressed protein -
16 Sobic.009G141300 GDSL-like lipase/acylhydrolase, putative, expressed -
17 Sobic.004G199700 expressed protein -
18 Sobic.003G300400 expressed protein -
19 Sobic.001G488400 "PGL1(Ortholog in rice:Heang and Sassa, 2012)"(PubMedID : 31659850)@bHLH family protein, putative, expressed -
20 Sobic.004G168600 heat shock protein-related, putative, expressed -


Gene co-expression network
sample Sobic002G072700 Sobic002G072700 Sobic007G189400 Sobic007G189400 Sobic002G072700--Sobic007G189400 Sobic001G228100 Sobic001G228100 Sobic002G072700--Sobic001G228100 Sobic005G029700 Sobic005G029700 Sobic002G072700--Sobic005G029700 Sobic005G204100 Sobic005G204100 Sobic002G072700--Sobic005G204100 Sobic002G139800 Sobic002G139800 Sobic002G072700--Sobic002G139800 Sobic007G142900 Sobic007G142900 Sobic002G072700--Sobic007G142900 Sobic001G221900 Sobic001G221900 Sobic002G072700--Sobic001G221900 Sobic009G259500 Sobic009G259500 Sobic002G072700--Sobic009G259500 Sobic006G247700 Sobic006G247700 Sobic002G072700--Sobic006G247700 Sobic007G189400--Sobic002G072700 Sobic005G188500 Sobic005G188500 Sobic007G189400--Sobic005G188500 Sobic009G254500 Sobic009G254500 Sobic007G189400--Sobic009G254500 Sobic003G339600 Sobic003G339600 Sobic007G189400--Sobic003G339600 Sobic001G488400 Sobic001G488400 Sobic007G189400--Sobic001G488400 Sobic010G020600 Sobic010G020600 Sobic007G189400--Sobic010G020600 Sobic006G044200 Sobic006G044200 Sobic007G189400--Sobic006G044200 Sobic001G119200 Sobic001G119200 Sobic007G189400--Sobic001G119200 Sobic007G189400--Sobic002G139800 Sobic001G228100--Sobic005G029700 Sobic001G228100--Sobic002G072700 Sobic001G228100--Sobic006G247700 Sobic009G037300 Sobic009G037300 Sobic001G228100--Sobic009G037300 Sobic001G228100--Sobic001G221900 Sobic001G228100--Sobic007G189400 Sobic001G228100--Sobic009G254500 Sobic001G228100--Sobic003G339600 Sobic010G027700 Sobic010G027700 Sobic001G228100--Sobic010G027700 Sobic005G029700--Sobic001G228100 Sobic005G029700--Sobic006G247700 Sobic005G029700--Sobic002G072700 Sobic005G029700--Sobic007G189400 Sobic005G029700--Sobic001G221900 Sobic005G029700--Sobic005G204100 Sobic005G029700--Sobic003G339600 Sobic005G029700--Sobic007G142900 Sobic002G315000 Sobic002G315000 Sobic005G029700--Sobic002G315000 Sobic002G216600 Sobic002G216600 Sobic005G204100--Sobic002G216600 Sobic005G204100--Sobic009G259500 Sobic005G204100--Sobic002G072700 Sobic005G204100--Sobic007G142900 Sobic002G098500 Sobic002G098500 Sobic005G204100--Sobic002G098500 Sobic005G204100--Sobic001G221900 Sobic001G384700 Sobic001G384700 Sobic005G204100--Sobic001G384700 Sobic006G272500 Sobic006G272500 Sobic005G204100--Sobic006G272500 Sobic005G204100--Sobic007G189400 Sobic001G438500 Sobic001G438500 Sobic002G139800--Sobic001G438500 Sobic004G062100 Sobic004G062100 Sobic002G139800--Sobic004G062100 Sobic002G139800--Sobic009G254500 Sobic002G011000 Sobic002G011000 Sobic002G139800--Sobic002G011000 Sobic002G139800--Sobic007G189400 Sobic008G187400 Sobic008G187400 Sobic002G139800--Sobic008G187400 Sobic002G067500 Sobic002G067500 Sobic002G139800--Sobic002G067500 Sobic002G139800--Sobic002G072700 Sobic009G141300 Sobic009G141300 Sobic002G139800--Sobic009G141300 Sobic007G142900--Sobic002G072700 Sobic007G142900--Sobic005G204100 Sobic007G142900--Sobic009G259500 Sobic007G142900--Sobic007G189400 Sobic007G142900--Sobic002G216600 Sobic004G168600 Sobic004G168600 Sobic007G142900--Sobic004G168600 Sobic008G136100 Sobic008G136100 Sobic007G142900--Sobic008G136100 Sobic010G180800 Sobic010G180800 Sobic007G142900--Sobic010G180800 Sobic006G201600 Sobic006G201600 Sobic007G142900--Sobic006G201600 Sobic003G070600 Sobic003G070600 Sobic001G221900--Sobic003G070600 Sobic009G235700 Sobic009G235700 Sobic001G221900--Sobic009G235700 Sobic001G221900--Sobic010G020600 Sobic010G078700 Sobic010G078700 Sobic001G221900--Sobic010G078700 Sobic001G221900--Sobic003G339600 Sobic001G199400 Sobic001G199400 Sobic001G221900--Sobic001G199400 Sobic004G248100 Sobic004G248100 Sobic001G221900--Sobic004G248100 Sobic001G074000 Sobic001G074000 Sobic001G221900--Sobic001G074000 Sobic003G113500 Sobic003G113500 Sobic001G221900--Sobic003G113500 Sobic009G259500--Sobic005G204100 Sobic009G259500--Sobic002G216600 Sobic004G154600 Sobic004G154600 Sobic009G259500--Sobic004G154600 Sobic009G259500--Sobic002G072700 Sobic004G199700 Sobic004G199700 Sobic009G259500--Sobic004G199700 Sobic009G259500--Sobic007G142900 Sobic001G258100 Sobic001G258100 Sobic009G259500--Sobic001G258100 Sobic003G174900 Sobic003G174900 Sobic009G259500--Sobic003G174900 Sobic003G300200 Sobic003G300200 Sobic009G259500--Sobic003G300200 Sobic006G247700--Sobic005G029700 Sobic006G247700--Sobic001G228100 Sobic006G247700--Sobic002G072700 Sobic006G247700--Sobic002G139800 Sobic006G247700--Sobic009G037300 Sobic006G247700--Sobic009G254500 Sobic006G181600 Sobic006G181600 Sobic006G247700--Sobic006G181600 Sobic006G247700--Sobic007G189400 Sobic005G110900 Sobic005G110900 Sobic006G247700--Sobic005G110900
Octagon: transcription factors


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