Gene annotation
Transcriptome id Sobic.002G190800.1
Synonym Sb02g023810
Functional annotation expressed protein
UniProt C5XC05
Pfam -
Panther DB PTHR35987 PTHR35987:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G10522 : -
RAP-DB (Rice) LOC_Os09g21460.1 : expressed protein
MaizeGDB (Corn) Zm00025a013846
Brachypodium KQJ90111
Barley -
Wheat TraesCS5D02G206300 , TraesCS5B02G199200 , TraesCS5A02G200600 , TraesCS5D02G206300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G044000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@EMB1303, putative, expressed -
2 Sobic.010G012900 superoxide dismutase, chloroplast, putative, expressed K04564: superoxide dismutase, Fe-Mn family
3 Sobic.001G172300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@kinase, pfkB family, putative, expressed -
4 Sobic.007G034500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DAG protein, chloroplast precursor, putative, expressed -
5 Sobic.001G383900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
6 Sobic.003G392000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@PDE312/PTAC10, putative, expressed -
7 Sobic.001G120000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed -
8 Sobic.001G357200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RNA recognition motif containing protein, putative, expressed K11294: NCL, nucleolin
9 Sobic.001G188600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Rf1, mitochondrial precursor, putative, expressed -
10 Sobic.001G027600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ribosomal L18p/L5e family protein, putative, expressed K02881: RP-L18, MRPL18, large subunit ribosomal protein L18
11 Sobic.006G280050 - K02961: RP-S17, MRPS17, small subunit ribosomal protein S17
12 Sobic.004G253800 - -
13 Sobic.009G098100 T-complex protein, putative, expressed -
14 Sobic.001G076500 ribosomal protein, putative, expressed K02996: RP-S9, MRPS9, small subunit ribosomal protein S9
15 Sobic.007G211100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RNA methyltransferase, TrmH family protein, putative, expressed K03216: trmL, tRNA (cytidine/uridine-2'-O-)-methyltransferase
16 Sobic.006G114300 pentatricopeptide, putative, expressed -
17 Sobic.009G059100 Cupin domain containing protein, expressed -
18 Sobic.004G191200 PsbQ-like protein 1(PubMedID : 26186930)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@oxygen evolving enhancer protein 3, identical, putative, expressed K08901: photosystem II oxygen-evolving enhancer protein 3
19 Sobic.003G157500 oxidoreductase, 2OG-FeII oxygenase domain containing protein, putative, expressed -
20 Sobic.006G025700 - -


Gene co-expression network
sample Sobic002G190800 Sobic002G190800 Sobic004G044000 Sobic004G044000 Sobic002G190800--Sobic004G044000 Sobic010G012900 Sobic010G012900 Sobic002G190800--Sobic010G012900 Sobic001G172300 Sobic001G172300 Sobic002G190800--Sobic001G172300 Sobic007G034500 Sobic007G034500 Sobic002G190800--Sobic007G034500 Sobic001G383900 Sobic001G383900 Sobic002G190800--Sobic001G383900 Sobic003G392000 Sobic003G392000 Sobic002G190800--Sobic003G392000 Sobic001G120000 Sobic001G120000 Sobic002G190800--Sobic001G120000 Sobic001G357200 Sobic001G357200 Sobic002G190800--Sobic001G357200 Sobic001G188600 Sobic001G188600 Sobic002G190800--Sobic001G188600 Sobic001G027600 Sobic001G027600 Sobic004G044000--Sobic001G027600 Sobic004G044000--Sobic001G383900 Sobic006G280050 Sobic006G280050 Sobic004G044000--Sobic006G280050 Sobic009G001500 Sobic009G001500 Sobic004G044000--Sobic009G001500 Sobic003G030900 Sobic003G030900 Sobic004G044000--Sobic003G030900 Sobic007G013400 Sobic007G013400 Sobic004G044000--Sobic007G013400 Sobic002G242600 Sobic002G242600 Sobic004G044000--Sobic002G242600 Sobic001G076500 Sobic001G076500 Sobic004G044000--Sobic001G076500 Sobic004G044000--Sobic007G034500 Sobic010G012900--Sobic001G188600 Sobic010G012900--Sobic001G357200 Sobic010G011200 Sobic010G011200 Sobic010G012900--Sobic010G011200 Sobic010G012900--Sobic001G383900 Sobic010G012900--Sobic001G172300 Sobic010G012900--Sobic007G034500 Sobic003G383500 Sobic003G383500 Sobic010G012900--Sobic003G383500 Sobic006G114300 Sobic006G114300 Sobic010G012900--Sobic006G114300 Sobic009G098100 Sobic009G098100 Sobic010G012900--Sobic009G098100 Sobic001G172300--Sobic010G012900 Sobic001G347800 Sobic001G347800 Sobic001G172300--Sobic001G347800 Sobic001G172300--Sobic003G392000 Sobic001G172300--Sobic001G188600 Sobic001G172300--Sobic002G190800 Sobic001G172300--Sobic006G114300 Sobic002G360200 Sobic002G360200 Sobic001G172300--Sobic002G360200 Sobic001G172300--Sobic001G357200 Sobic004G253800 Sobic004G253800 Sobic001G172300--Sobic004G253800 Sobic007G171800 Sobic007G171800 Sobic007G034500--Sobic007G171800 Sobic007G034500--Sobic004G044000 Sobic007G034500--Sobic006G280050 Sobic004G191200 Sobic004G191200 Sobic007G034500--Sobic004G191200 Sobic007G034500--Sobic001G357200 Sobic007G034500--Sobic009G001500 Sobic007G034500--Sobic001G383900 Sobic001G191000 Sobic001G191000 Sobic007G034500--Sobic001G191000 Sobic007G034500--Sobic001G027600 Sobic001G453300 Sobic001G453300 Sobic001G383900--Sobic001G453300 Sobic001G383900--Sobic001G027600 Sobic001G383900--Sobic001G076500 Sobic001G383900--Sobic004G044000 Sobic001G383900--Sobic009G098100 Sobic003G132600 Sobic003G132600 Sobic001G383900--Sobic003G132600 Sobic001G427000 Sobic001G427000 Sobic001G383900--Sobic001G427000 Sobic001G391400 Sobic001G391400 Sobic001G383900--Sobic001G391400 Sobic001G383900--Sobic009G001500 Sobic003G392000--Sobic001G172300 Sobic003G392000--Sobic002G190800 Sobic001G228300 Sobic001G228300 Sobic003G392000--Sobic001G228300 Sobic003G392000--Sobic001G383900 Sobic003G392000--Sobic010G012900 Sobic003G392000--Sobic001G120000 Sobic003G392000--Sobic001G188600 Sobic003G392000--Sobic007G034500 Sobic003G392000--Sobic004G253800 Sobic001G120000--Sobic004G044000 Sobic001G120000--Sobic004G191200 Sobic001G120000--Sobic002G190800 Sobic006G263800 Sobic006G263800 Sobic001G120000--Sobic006G263800 Sobic002G190100 Sobic002G190100 Sobic001G120000--Sobic002G190100 Sobic004G017200 Sobic004G017200 Sobic001G120000--Sobic004G017200 Sobic002G305700 Sobic002G305700 Sobic001G120000--Sobic002G305700 Sobic001G120000--Sobic001G027600 Sobic001G255400 Sobic001G255400 Sobic001G120000--Sobic001G255400 Sobic001G357200--Sobic001G188600 Sobic001G357200--Sobic006G114300 Sobic001G357200--Sobic010G012900 Sobic001G357200--Sobic009G001500 Sobic008G030000 Sobic008G030000 Sobic001G357200--Sobic008G030000 Sobic001G357200--Sobic007G034500 Sobic008G123600 Sobic008G123600 Sobic001G357200--Sobic008G123600 Sobic001G069500 Sobic001G069500 Sobic001G357200--Sobic001G069500 Sobic001G357200--Sobic003G383500 Sobic001G188600--Sobic001G069500 Sobic001G188600--Sobic006G114300 Sobic001G188600--Sobic001G357200 Sobic001G188600--Sobic009G098100 Sobic001G188600--Sobic010G012900 Sobic004G109000 Sobic004G109000 Sobic001G188600--Sobic004G109000 Sobic007G211100 Sobic007G211100 Sobic001G188600--Sobic007G211100 Sobic001G188600--Sobic004G253800 Sobic001G188600--Sobic008G030000
Octagon: transcription factors


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