Gene annotation
Transcriptome id Sobic.003G098600.1
Synonym Sb03g008250
Functional annotation expressed protein
UniProt C5XEV3
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os01g02139.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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cDNA sequences
Sobic.003G098600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G243400 copper methylamine oxidase precursor, putative, expressed K00276: AOC3, AOC2, primary-amine oxidase
2 Sobic.004G203900 oxidoreductase, short chain dehydrogenase/reductase family, putative, expressed K10251: HSD17B12, KAR, 17beta-estradiol 17-dehydrogenase / very-long-chain 3-oxoacyl-CoA reductase
3 Sobic.001G021500 CESA5 - cellulose synthase, expressed K10999: cellulose synthase A
4 Sobic.009G055900 fasciclin-like arabinogalactan protein 8 precursor, putative, expressed -
5 Sobic.004G168700 harpin-induced protein 1 domain containing protein, expressed -
6 Sobic.001G405000 MRH1, putative, expressed -
7 Sobic.003G071400 expressed protein K10703: HACD, PHS1, very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase
8 Sobic.007G166600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@copper/zinc superoxide dismutase, putative, expressed K04565: superoxide dismutase, Cu-Zn family
9 Sobic.001G099100 endoglucanase, putative, expressed K01179: endoglucanase
10 Sobic.003G165800 UDP-N-acetylglucosamine--N-acetylmuramyl-pyrophosphor yl-undecaprenol N-acetylglucosamine transferase, putative, expressed K02563: UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase
11 Sobic.008G135701 - -
12 Sobic.002G377300 CAMK_CAMK_like.35 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
13 Sobic.010G123300 expressed protein -
14 Sobic.010G037600 GDSL-like lipase/acylhydrolase, putative, expressed -
15 Sobic.009G144200 glycosyl transferase, putative, expressed -
16 Sobic.008G075200 2-dehydro-3-deoxyphosphooctonate aldolase, putative, expressed K01627: 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase)
17 Sobic.003G136400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peptidyl-prolyl cis-trans isomerase, putative, expressed K03768: PPIB, peptidyl-prolyl cis-trans isomerase B (cyclophilin B)
18 Sobic.004G319800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@chaperonin, putative, expressed K04078: groES, chaperonin GroES
19 Sobic.001G441200 translocase of chloroplast 34, putative, expressed -
20 Sobic.010G050900 harpin-induced protein, putative, expressed -


Gene co-expression network
sample Sobic003G098600 Sobic003G098600 Sobic004G243400 Sobic004G243400 Sobic003G098600--Sobic004G243400 Sobic004G203900 Sobic004G203900 Sobic003G098600--Sobic004G203900 Sobic001G021500 Sobic001G021500 Sobic003G098600--Sobic001G021500 Sobic009G055900 Sobic009G055900 Sobic003G098600--Sobic009G055900 Sobic004G168700 Sobic004G168700 Sobic003G098600--Sobic004G168700 Sobic001G405000 Sobic001G405000 Sobic003G098600--Sobic001G405000 Sobic003G071400 Sobic003G071400 Sobic003G098600--Sobic003G071400 Sobic007G166600 Sobic007G166600 Sobic003G098600--Sobic007G166600 Sobic001G099100 Sobic001G099100 Sobic003G098600--Sobic001G099100 Sobic004G243400--Sobic001G021500 Sobic004G243400--Sobic009G055900 Sobic009G144200 Sobic009G144200 Sobic004G243400--Sobic009G144200 Sobic004G243400--Sobic001G405000 Sobic004G243400--Sobic003G098600 Sobic002G003200 Sobic002G003200 Sobic004G243400--Sobic002G003200 Sobic003G176200 Sobic003G176200 Sobic004G243400--Sobic003G176200 Sobic004G044100 Sobic004G044100 Sobic004G243400--Sobic004G044100 Sobic008G008500 Sobic008G008500 Sobic004G243400--Sobic008G008500 Sobic004G203900--Sobic003G071400 Sobic004G265600 Sobic004G265600 Sobic004G203900--Sobic004G265600 Sobic003G151300 Sobic003G151300 Sobic004G203900--Sobic003G151300 Sobic009G032600 Sobic009G032600 Sobic004G203900--Sobic009G032600 Sobic006G038200 Sobic006G038200 Sobic004G203900--Sobic006G038200 Sobic008G000100 Sobic008G000100 Sobic004G203900--Sobic008G000100 Sobic002G347400 Sobic002G347400 Sobic004G203900--Sobic002G347400 Sobic004G203900--Sobic003G098600 Sobic004G203900--Sobic004G168700 Sobic001G021500--Sobic004G243400 Sobic002G377300 Sobic002G377300 Sobic001G021500--Sobic002G377300 Sobic001G021500--Sobic009G055900 Sobic003G165800 Sobic003G165800 Sobic001G021500--Sobic003G165800 Sobic008G190500 Sobic008G190500 Sobic001G021500--Sobic008G190500 Sobic003G347300 Sobic003G347300 Sobic001G021500--Sobic003G347300 Sobic010G123300 Sobic010G123300 Sobic001G021500--Sobic010G123300 Sobic001G021500--Sobic009G144200 Sobic007G210900 Sobic007G210900 Sobic001G021500--Sobic007G210900 Sobic008G143600 Sobic008G143600 Sobic009G055900--Sobic008G143600 Sobic009G055900--Sobic002G377300 Sobic009G055900--Sobic001G405000 Sobic004G109000 Sobic004G109000 Sobic009G055900--Sobic004G109000 Sobic009G059100 Sobic009G059100 Sobic009G055900--Sobic009G059100 Sobic006G001400 Sobic006G001400 Sobic009G055900--Sobic006G001400 Sobic006G060500 Sobic006G060500 Sobic009G055900--Sobic006G060500 Sobic009G055900--Sobic004G243400 Sobic001G389600 Sobic001G389600 Sobic009G055900--Sobic001G389600 Sobic010G086800 Sobic010G086800 Sobic004G168700--Sobic010G086800 Sobic004G168700--Sobic009G032600 Sobic009G232200 Sobic009G232200 Sobic004G168700--Sobic009G232200 Sobic008G082400 Sobic008G082400 Sobic004G168700--Sobic008G082400 Sobic009G211800 Sobic009G211800 Sobic004G168700--Sobic009G211800 Sobic002G072200 Sobic002G072200 Sobic004G168700--Sobic002G072200 Sobic004G243800 Sobic004G243800 Sobic004G168700--Sobic004G243800 Sobic009G226900 Sobic009G226900 Sobic004G168700--Sobic009G226900 Sobic003G108000 Sobic003G108000 Sobic004G168700--Sobic003G108000 Sobic001G405000--Sobic009G055900 Sobic001G405000--Sobic002G003200 Sobic001G405000--Sobic004G243400 Sobic001G405000--Sobic003G071400 Sobic008G163000 Sobic008G163000 Sobic001G405000--Sobic008G163000 Sobic001G275600 Sobic001G275600 Sobic001G405000--Sobic001G275600 Sobic002G201100 Sobic002G201100 Sobic001G405000--Sobic002G201100 Sobic001G405000--Sobic002G377300 Sobic001G405000--Sobic004G168700 Sobic003G071400--Sobic004G203900 Sobic003G071400--Sobic001G405000 Sobic003G071400--Sobic004G168700 Sobic001G376700 Sobic001G376700 Sobic003G071400--Sobic001G376700 Sobic003G071400--Sobic009G055900 Sobic003G071400--Sobic003G108000 Sobic003G071400--Sobic002G003200 Sobic003G420900 Sobic003G420900 Sobic003G071400--Sobic003G420900 Sobic004G319800 Sobic004G319800 Sobic003G071400--Sobic004G319800 Sobic008G135701 Sobic008G135701 Sobic007G166600--Sobic008G135701 Sobic007G166600--Sobic004G319800 Sobic007G166600--Sobic009G055900 Sobic001G104300 Sobic001G104300 Sobic007G166600--Sobic001G104300 Sobic005G022000 Sobic005G022000 Sobic007G166600--Sobic005G022000 Sobic007G026200 Sobic007G026200 Sobic007G166600--Sobic007G026200 Sobic005G105850 Sobic005G105850 Sobic007G166600--Sobic005G105850 Sobic007G211100 Sobic007G211100 Sobic007G166600--Sobic007G211100 Sobic010G202700 Sobic010G202700 Sobic007G166600--Sobic010G202700 Sobic004G051300 Sobic004G051300 Sobic001G099100--Sobic004G051300 Sobic002G118700 Sobic002G118700 Sobic001G099100--Sobic002G118700 Sobic002G276600 Sobic002G276600 Sobic001G099100--Sobic002G276600 Sobic002G075500 Sobic002G075500 Sobic001G099100--Sobic002G075500 Sobic010G090500 Sobic010G090500 Sobic001G099100--Sobic010G090500 Sobic009G026101 Sobic009G026101 Sobic001G099100--Sobic009G026101 Sobic009G125900 Sobic009G125900 Sobic001G099100--Sobic009G125900 Sobic003G353400 Sobic003G353400 Sobic001G099100--Sobic003G353400 Sobic009G079100 Sobic009G079100 Sobic001G099100--Sobic009G079100
Octagon: transcription factors


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