Hb_162275_010

Information

Type -
Description -
Location Contig162275: 7782-9970
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_162275_010 0.0 - - -
2 Hb_001804_060 0.0769286549 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_18059 [Jatropha curcas]
3 Hb_000057_060 0.0837614084 - - PREDICTED: uncharacterized protein LOC105634990 isoform X4 [Jatropha curcas]
4 Hb_003638_030 0.0882080305 - - PREDICTED: uncharacterized protein LOC105645805 [Jatropha curcas]
5 Hb_002391_110 0.0924754434 - - PREDICTED: ribosomal L1 domain-containing protein 1-like [Jatropha curcas]
6 Hb_000696_110 0.0931296498 - - PREDICTED: la-related protein 1C-like isoform X1 [Jatropha curcas]
7 Hb_127979_010 0.0934567678 - - PREDICTED: uncharacterized protein LOC105629383 [Jatropha curcas]
8 Hb_000365_360 0.0961337598 - - PREDICTED: RING finger and transmembrane domain-containing protein 2 isoform X1 [Jatropha curcas]
9 Hb_026048_090 0.0963068834 - - conserved hypothetical protein [Ricinus communis]
10 Hb_000599_120 0.0980057965 - - PREDICTED: putative E3 ubiquitin-protein ligase XBAT34 [Jatropha curcas]
11 Hb_000784_090 0.0989620385 - - PREDICTED: receptor homology region, transmembrane domain- and RING domain-containing protein 2 [Jatropha curcas]
12 Hb_000700_090 0.1001170722 - - protein with unknown function [Ricinus communis]
13 Hb_098709_010 0.1002600028 - - PREDICTED: protein argonaute 1 [Jatropha curcas]
14 Hb_001433_170 0.100789374 - - PREDICTED: topless-related protein 3 isoform X1 [Jatropha curcas]
15 Hb_026048_100 0.1020363753 - - PREDICTED: putative cell division cycle ATPase [Jatropha curcas]
16 Hb_003638_140 0.102417166 - - protein binding protein, putative [Ricinus communis]
17 Hb_002681_140 0.102670891 - - PREDICTED: surfeit locus protein 2 [Jatropha curcas]
18 Hb_000538_210 0.1041982303 - - ATP binding protein, putative [Ricinus communis]
19 Hb_001842_070 0.1050209147 - - PREDICTED: uncharacterized protein LOC105637106 [Jatropha curcas]
20 Hb_001369_060 0.1069479237 - - PREDICTED: uncharacterized Rho GTPase-activating protein At5g61530 [Jatropha curcas]

Gene co-expression network

sample Hb_162275_010 Hb_162275_010 Hb_001804_060 Hb_001804_060 Hb_162275_010--Hb_001804_060 Hb_000057_060 Hb_000057_060 Hb_162275_010--Hb_000057_060 Hb_003638_030 Hb_003638_030 Hb_162275_010--Hb_003638_030 Hb_002391_110 Hb_002391_110 Hb_162275_010--Hb_002391_110 Hb_000696_110 Hb_000696_110 Hb_162275_010--Hb_000696_110 Hb_127979_010 Hb_127979_010 Hb_162275_010--Hb_127979_010 Hb_001369_060 Hb_001369_060 Hb_001804_060--Hb_001369_060 Hb_003638_140 Hb_003638_140 Hb_001804_060--Hb_003638_140 Hb_098709_010 Hb_098709_010 Hb_001804_060--Hb_098709_010 Hb_000784_090 Hb_000784_090 Hb_001804_060--Hb_000784_090 Hb_000365_360 Hb_000365_360 Hb_001804_060--Hb_000365_360 Hb_001433_170 Hb_001433_170 Hb_000057_060--Hb_001433_170 Hb_009510_030 Hb_009510_030 Hb_000057_060--Hb_009510_030 Hb_003404_030 Hb_003404_030 Hb_000057_060--Hb_003404_030 Hb_000771_140 Hb_000771_140 Hb_000057_060--Hb_000771_140 Hb_000057_060--Hb_127979_010 Hb_002506_010 Hb_002506_010 Hb_000057_060--Hb_002506_010 Hb_002207_100 Hb_002207_100 Hb_003638_030--Hb_002207_100 Hb_000805_090 Hb_000805_090 Hb_003638_030--Hb_000805_090 Hb_026048_100 Hb_026048_100 Hb_003638_030--Hb_026048_100 Hb_000172_400 Hb_000172_400 Hb_003638_030--Hb_000172_400 Hb_000700_090 Hb_000700_090 Hb_003638_030--Hb_000700_090 Hb_000599_120 Hb_000599_120 Hb_002391_110--Hb_000599_120 Hb_002681_140 Hb_002681_140 Hb_002391_110--Hb_002681_140 Hb_002391_110--Hb_127979_010 Hb_000085_340 Hb_000085_340 Hb_002391_110--Hb_000085_340 Hb_026048_090 Hb_026048_090 Hb_002391_110--Hb_026048_090 Hb_000176_140 Hb_000176_140 Hb_002391_110--Hb_000176_140 Hb_000152_140 Hb_000152_140 Hb_000696_110--Hb_000152_140 Hb_000696_110--Hb_000057_060 Hb_000696_110--Hb_000599_120 Hb_000538_210 Hb_000538_210 Hb_000696_110--Hb_000538_210 Hb_010174_130 Hb_010174_130 Hb_000696_110--Hb_010174_130 Hb_002357_040 Hb_002357_040 Hb_000696_110--Hb_002357_040 Hb_127979_010--Hb_000176_140 Hb_127979_010--Hb_001433_170 Hb_127979_010--Hb_026048_090 Hb_127979_010--Hb_003404_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
16.8334 2.12179 1.47446 0.62887 12.0075 18.1012
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
11.2595 10.3691 12.5288 3.24074 2.12691

CAGE analysis