Hb_120052_010

Information

Type -
Description -
Location Contig120052: 1-171
Sequence    

Annotation

kegg
ID pper:PRUPEppa1027171mg
description hypothetical protein
nr
ID XP_007219862.1
description hypothetical protein PRUPE_ppa1027171mg [Prunus persica]
swissprot
ID -
description -
trembl
ID M5X6G2
description Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa1027171mg PE=4 SV=1
Gene Ontology
ID GO:0005737
description aldo keto reductase family protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_120052_010 0.0 - - hypothetical protein PRUPE_ppa1027171mg [Prunus persica]
2 Hb_075745_010 0.1950526333 - - hypothetical protein EUGRSUZ_D00579 [Eucalyptus grandis]
3 Hb_000289_080 0.2153499844 - - conserved hypothetical protein [Ricinus communis]
4 Hb_003029_100 0.2332315732 - - -
5 Hb_000668_020 0.240054446 - - -
6 Hb_002379_040 0.2524867152 - - -
7 Hb_002918_190 0.2535085052 - - Uncharacterized protein TCM_029816 [Theobroma cacao]
8 Hb_001579_040 0.2562864235 - - -
9 Hb_001584_320 0.2576897543 - - PREDICTED: zinc finger CCCH domain-containing protein 3 [Jatropha curcas]
10 Hb_000086_190 0.2596013008 - - PREDICTED: H/ACA ribonucleoprotein complex subunit 3-like protein [Cucumis sativus]
11 Hb_005928_070 0.2631757776 - - hypothetical protein POPTR_0002s04520g [Populus trichocarpa]
12 Hb_006065_040 0.2642739668 - - -
13 Hb_002079_020 0.2644919997 - - -
14 Hb_000684_480 0.2656819485 transcription factor TF Family: Orphans -
15 Hb_006995_010 0.2690691973 - - PREDICTED: 14 kDa zinc-binding protein [Jatropha curcas]
16 Hb_001712_080 0.2748492579 - - -
17 Hb_000204_020 0.2842902719 transcription factor TF Family: GNAT PREDICTED: uncharacterized N-acetyltransferase ycf52 [Jatropha curcas]
18 Hb_003695_010 0.2861852402 - - PREDICTED: uncharacterized protein LOC104104926 [Nicotiana tomentosiformis]
19 Hb_012675_080 0.2899212264 - - PREDICTED: cytoplasmic tRNA 2-thiolation protein 1 [Populus euphratica]
20 Hb_124141_010 0.2965872268 - - plant origin recognition complex subunit, putative [Ricinus communis]

Gene co-expression network

sample Hb_120052_010 Hb_120052_010 Hb_075745_010 Hb_075745_010 Hb_120052_010--Hb_075745_010 Hb_000289_080 Hb_000289_080 Hb_120052_010--Hb_000289_080 Hb_003029_100 Hb_003029_100 Hb_120052_010--Hb_003029_100 Hb_000668_020 Hb_000668_020 Hb_120052_010--Hb_000668_020 Hb_002379_040 Hb_002379_040 Hb_120052_010--Hb_002379_040 Hb_002918_190 Hb_002918_190 Hb_120052_010--Hb_002918_190 Hb_075745_010--Hb_003029_100 Hb_075745_010--Hb_000289_080 Hb_006995_010 Hb_006995_010 Hb_075745_010--Hb_006995_010 Hb_003656_150 Hb_003656_150 Hb_075745_010--Hb_003656_150 Hb_012675_080 Hb_012675_080 Hb_075745_010--Hb_012675_080 Hb_000289_080--Hb_006995_010 Hb_000289_080--Hb_003029_100 Hb_000086_190 Hb_000086_190 Hb_000289_080--Hb_000086_190 Hb_000204_020 Hb_000204_020 Hb_000289_080--Hb_000204_020 Hb_000289_080--Hb_000668_020 Hb_000289_080--Hb_003656_150 Hb_003029_100--Hb_006995_010 Hb_003029_100--Hb_003656_150 Hb_003029_100--Hb_000086_190 Hb_124141_010 Hb_124141_010 Hb_003029_100--Hb_124141_010 Hb_006198_090 Hb_006198_090 Hb_003029_100--Hb_006198_090 Hb_000668_020--Hb_000086_190 Hb_001584_320 Hb_001584_320 Hb_000668_020--Hb_001584_320 Hb_000668_020--Hb_012675_080 Hb_000668_020--Hb_006995_010 Hb_000668_020--Hb_003029_100 Hb_021888_040 Hb_021888_040 Hb_002379_040--Hb_021888_040 Hb_011200_010 Hb_011200_010 Hb_002379_040--Hb_011200_010 Hb_059978_010 Hb_059978_010 Hb_002379_040--Hb_059978_010 Hb_002379_040--Hb_000668_020 Hb_002379_040--Hb_012675_080 Hb_003551_010 Hb_003551_010 Hb_002379_040--Hb_003551_010 Hb_001712_080 Hb_001712_080 Hb_002918_190--Hb_001712_080 Hb_082195_010 Hb_082195_010 Hb_002918_190--Hb_082195_010 Hb_002972_060 Hb_002972_060 Hb_002918_190--Hb_002972_060 Hb_002918_190--Hb_000289_080 Hb_002918_190--Hb_011200_010 Hb_002918_190--Hb_059978_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 28.4339 0 60.1764
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
6.86424 19.9613 0 0 0

CAGE analysis