Hb_099387_010

Information

Type -
Description -
Location Contig99387: 8446-10458
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_099387_010 0.0 - - -
2 Hb_001155_030 0.1719387492 - - 60S ribosomal protein L10A [Hevea brasiliensis]
3 Hb_001102_180 0.1911774186 - - eukaryotic translation initiation factor, putative [Ricinus communis]
4 Hb_005052_020 0.1941911863 - - -
5 Hb_000028_140 0.2027431061 - - surfeit locus protein, putative [Ricinus communis]
6 Hb_006641_010 0.2053749082 - - PREDICTED: uncharacterized protein LOC104219776 [Nicotiana sylvestris]
7 Hb_001633_170 0.2062885905 - - PREDICTED: aspartokinase 2, chloroplastic-like isoform X1 [Jatropha curcas]
8 Hb_003147_050 0.2068258115 - - nucleic acid binding protein, putative [Ricinus communis]
9 Hb_001396_220 0.2072055118 - - nuclear transport factor, putative [Ricinus communis]
10 Hb_001006_260 0.207760653 - - PREDICTED: eukaryotic translation initiation factor 3 subunit I-like [Jatropha curcas]
11 Hb_001141_280 0.2077681284 - - PREDICTED: pentatricopeptide repeat-containing protein At4g14820 [Vitis vinifera]
12 Hb_003861_120 0.2090683901 transcription factor TF Family: RWP-RK transcription factor, putative [Ricinus communis]
13 Hb_001862_100 0.2094238961 - - PREDICTED: uncharacterized protein LOC105639799 isoform X2 [Jatropha curcas]
14 Hb_116898_010 0.2129272501 - - PREDICTED: uncharacterized protein LOC105639569 isoform X2 [Jatropha curcas]
15 Hb_155764_010 0.215545125 - - -
16 Hb_001881_020 0.2177576057 - - clathrin binding protein, putative [Ricinus communis]
17 Hb_003097_210 0.2177614264 - - PREDICTED: uncharacterized protein LOC105631194 isoform X1 [Jatropha curcas]
18 Hb_100777_010 0.2177645264 - - PREDICTED: mediator of RNA polymerase II transcription subunit 19a-like [Populus euphratica]
19 Hb_000261_460 0.2183700299 - - 60S ribosomal protein L13aA [Hevea brasiliensis]
20 Hb_000671_150 0.2187623256 - - PREDICTED: signal recognition particle 19 kDa protein-like [Jatropha curcas]

Gene co-expression network

sample Hb_099387_010 Hb_099387_010 Hb_001155_030 Hb_001155_030 Hb_099387_010--Hb_001155_030 Hb_001102_180 Hb_001102_180 Hb_099387_010--Hb_001102_180 Hb_005052_020 Hb_005052_020 Hb_099387_010--Hb_005052_020 Hb_000028_140 Hb_000028_140 Hb_099387_010--Hb_000028_140 Hb_006641_010 Hb_006641_010 Hb_099387_010--Hb_006641_010 Hb_001633_170 Hb_001633_170 Hb_099387_010--Hb_001633_170 Hb_001155_030--Hb_000028_140 Hb_001829_060 Hb_001829_060 Hb_001155_030--Hb_001829_060 Hb_001155_030--Hb_006641_010 Hb_001242_110 Hb_001242_110 Hb_001155_030--Hb_001242_110 Hb_005731_170 Hb_005731_170 Hb_001155_030--Hb_005731_170 Hb_009666_040 Hb_009666_040 Hb_001155_030--Hb_009666_040 Hb_000200_340 Hb_000200_340 Hb_001102_180--Hb_000200_340 Hb_001102_180--Hb_001633_170 Hb_001102_180--Hb_001155_030 Hb_003615_010 Hb_003615_010 Hb_001102_180--Hb_003615_010 Hb_061090_010 Hb_061090_010 Hb_001102_180--Hb_061090_010 Hb_000057_200 Hb_000057_200 Hb_001102_180--Hb_000057_200 Hb_000575_150 Hb_000575_150 Hb_005052_020--Hb_000575_150 Hb_143629_040 Hb_143629_040 Hb_005052_020--Hb_143629_040 Hb_001881_020 Hb_001881_020 Hb_005052_020--Hb_001881_020 Hb_008103_120 Hb_008103_120 Hb_005052_020--Hb_008103_120 Hb_011828_020 Hb_011828_020 Hb_005052_020--Hb_011828_020 Hb_005052_020--Hb_001102_180 Hb_027073_040 Hb_027073_040 Hb_000028_140--Hb_027073_040 Hb_000028_140--Hb_001242_110 Hb_000239_010 Hb_000239_010 Hb_000028_140--Hb_000239_010 Hb_000227_230 Hb_000227_230 Hb_000028_140--Hb_000227_230 Hb_003996_020 Hb_003996_020 Hb_000028_140--Hb_003996_020 Hb_010436_060 Hb_010436_060 Hb_006641_010--Hb_010436_060 Hb_005117_010 Hb_005117_010 Hb_006641_010--Hb_005117_010 Hb_074979_020 Hb_074979_020 Hb_006641_010--Hb_074979_020 Hb_006641_010--Hb_000028_140 Hb_002759_060 Hb_002759_060 Hb_006641_010--Hb_002759_060 Hb_001633_170--Hb_009666_040 Hb_000627_120 Hb_000627_120 Hb_001633_170--Hb_000627_120 Hb_008311_010 Hb_008311_010 Hb_001633_170--Hb_008311_010 Hb_002527_070 Hb_002527_070 Hb_001633_170--Hb_002527_070 Hb_001141_280 Hb_001141_280 Hb_001633_170--Hb_001141_280 Hb_000205_270 Hb_000205_270 Hb_001633_170--Hb_000205_270
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.58035 0.726639 1.09089 0 0.769306 7.1358
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.71536 5.58623 6.04971 3.47648 0.544328

CAGE analysis