Hb_094437_070

Information

Type -
Description -
Location Contig94437: 20761-24189
Sequence    

Annotation

kegg
ID rcu:RCOM_1588200
description hypothetical protein
nr
ID XP_012068260.1
description PREDICTED: uncharacterized protein LOC105630881 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KZM3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16058 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_63239: 20834-23985
cDNA
(Sanger)
(ID:Location)		 017_E06.ab1: 23485-24062 , 049_F03.ab1: 23438-24062

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_094437_070 0.0 - - PREDICTED: uncharacterized protein LOC105630881 [Jatropha curcas]
2 Hb_000085_340 0.0851827303 - - PREDICTED: uncharacterized protein LOC105633038 isoform X1 [Jatropha curcas]
3 Hb_011316_030 0.0973245832 - - PREDICTED: DEAD-box ATP-dependent RNA helicase 7 isoform X1 [Jatropha curcas]
4 Hb_127979_010 0.1012952618 - - PREDICTED: uncharacterized protein LOC105629383 [Jatropha curcas]
5 Hb_019613_020 0.1066461857 - - phospholipase C, putative [Ricinus communis]
6 Hb_005754_020 0.1080712956 - - PREDICTED: mitogen-activated protein kinase homolog NTF4 [Jatropha curcas]
7 Hb_035524_030 0.1105268847 - - conserved hypothetical protein [Ricinus communis]
8 Hb_003352_050 0.1118300965 - - PREDICTED: uncharacterized protein LOC105643709 [Jatropha curcas]
9 Hb_002377_040 0.1119239725 - - serine/threonine protein kinase, putative [Ricinus communis]
10 Hb_000176_140 0.1124097568 - - PREDICTED: bystin [Jatropha curcas]
11 Hb_003050_040 0.1134486699 desease resistance Gene Name: AAA Katanin p60 ATPase-containing subunit, putative [Ricinus communis]
12 Hb_000179_250 0.1135396586 - - PREDICTED: WD repeat-containing protein 61-like [Citrus sinensis]
13 Hb_000085_280 0.1174986436 - - PREDICTED: beta-(1,2)-xylosyltransferase [Jatropha curcas]
14 Hb_002960_120 0.1178377116 - - PREDICTED: uncharacterized protein LOC105635318 [Jatropha curcas]
15 Hb_002391_110 0.1187115647 - - PREDICTED: ribosomal L1 domain-containing protein 1-like [Jatropha curcas]
16 Hb_019654_070 0.1191998666 - - PREDICTED: probable alpha-amylase 2 [Jatropha curcas]
17 Hb_002067_160 0.1201043066 - - Protein MLO, putative [Ricinus communis]
18 Hb_000028_470 0.1214542331 transcription factor TF Family: GNAT N-acetyltransferase, putative [Ricinus communis]
19 Hb_026048_090 0.1215946652 - - conserved hypothetical protein [Ricinus communis]
20 Hb_001017_090 0.1226700053 - - -

Gene co-expression network

sample Hb_094437_070 Hb_094437_070 Hb_000085_340 Hb_000085_340 Hb_094437_070--Hb_000085_340 Hb_011316_030 Hb_011316_030 Hb_094437_070--Hb_011316_030 Hb_127979_010 Hb_127979_010 Hb_094437_070--Hb_127979_010 Hb_019613_020 Hb_019613_020 Hb_094437_070--Hb_019613_020 Hb_005754_020 Hb_005754_020 Hb_094437_070--Hb_005754_020 Hb_035524_030 Hb_035524_030 Hb_094437_070--Hb_035524_030 Hb_002067_160 Hb_002067_160 Hb_000085_340--Hb_002067_160 Hb_000085_340--Hb_005754_020 Hb_002391_110 Hb_002391_110 Hb_000085_340--Hb_002391_110 Hb_002377_040 Hb_002377_040 Hb_000085_340--Hb_002377_040 Hb_026048_090 Hb_026048_090 Hb_000085_340--Hb_026048_090 Hb_000176_140 Hb_000176_140 Hb_000085_340--Hb_000176_140 Hb_003777_220 Hb_003777_220 Hb_011316_030--Hb_003777_220 Hb_011316_030--Hb_000176_140 Hb_000491_080 Hb_000491_080 Hb_011316_030--Hb_000491_080 Hb_000179_250 Hb_000179_250 Hb_011316_030--Hb_000179_250 Hb_001776_080 Hb_001776_080 Hb_011316_030--Hb_001776_080 Hb_011316_030--Hb_127979_010 Hb_127979_010--Hb_000176_140 Hb_001433_170 Hb_001433_170 Hb_127979_010--Hb_001433_170 Hb_000057_060 Hb_000057_060 Hb_127979_010--Hb_000057_060 Hb_127979_010--Hb_002391_110 Hb_127979_010--Hb_026048_090 Hb_003404_030 Hb_003404_030 Hb_127979_010--Hb_003404_030 Hb_019613_020--Hb_035524_030 Hb_019613_020--Hb_127979_010 Hb_000085_280 Hb_000085_280 Hb_019613_020--Hb_000085_280 Hb_176022_020 Hb_176022_020 Hb_019613_020--Hb_176022_020 Hb_019613_020--Hb_003404_030 Hb_019613_020--Hb_000057_060 Hb_002044_090 Hb_002044_090 Hb_005754_020--Hb_002044_090 Hb_000062_230 Hb_000062_230 Hb_005754_020--Hb_000062_230 Hb_005754_020--Hb_002377_040 Hb_000028_470 Hb_000028_470 Hb_005754_020--Hb_000028_470 Hb_003352_050 Hb_003352_050 Hb_005754_020--Hb_003352_050 Hb_005754_020--Hb_000176_140 Hb_035524_030--Hb_000085_280 Hb_005288_120 Hb_005288_120 Hb_035524_030--Hb_005288_120 Hb_000671_100 Hb_000671_100 Hb_035524_030--Hb_000671_100 Hb_024714_030 Hb_024714_030 Hb_035524_030--Hb_024714_030 Hb_035524_030--Hb_127979_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
96.0295 5.49717 9.60367 8.06816 65.5284 92.4737
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
71.2142 19.3663 50.0469 16.649 2.27516

CAGE analysis