Hb_074961_010

Information

Type -
Description -
Location Contig74961: 3-1199
Sequence    

Annotation

kegg
ID rcu:RCOM_0701530
description Receptor protein kinase CLAVATA1 precursor, putative (EC:1.3.1.74)
nr
ID XP_012071442.1
description PREDICTED: leucine-rich repeat receptor-like protein kinase TDR [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067L3G2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03982 PE=4 SV=1
Gene Ontology
ID GO:0004672
description leucine-rich repeat receptor-like protein kinase tdr

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_56818: 160-876
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_074961_010 0.0 - - PREDICTED: leucine-rich repeat receptor-like protein kinase TDR [Jatropha curcas]
2 Hb_000117_010 0.0639377448 - - PREDICTED: ankyrin repeat-containing protein At3g12360-like [Malus domestica]
3 Hb_000117_020 0.1096641743 - - Receptor protein kinase CLAVATA1 precursor, putative [Ricinus communis]
4 Hb_002253_110 0.151422632 - - cysteine desulfurylase, putative [Ricinus communis]
5 Hb_000033_060 0.1521482137 - - PREDICTED: uncharacterized protein LOC105111554 isoform X1 [Populus euphratica]
6 Hb_000878_040 0.1610188489 - - PREDICTED: uncharacterized protein LOC105635780 isoform X1 [Jatropha curcas]
7 Hb_023327_030 0.1612465567 - - osmotin-like protein [Hevea brasiliensis]
8 Hb_124587_010 0.1678314233 - - PREDICTED: importin-5-like [Musa acuminata subsp. malaccensis]
9 Hb_077219_010 0.1686610677 - - conserved hypothetical protein [Ricinus communis]
10 Hb_002769_040 0.1698626258 - - farnesyl-diphosphate farnesyltransferase, putative [Ricinus communis]
11 Hb_073339_010 0.1713166673 - - hypothetical protein 30 [Hevea brasiliensis]
12 Hb_098315_100 0.1718751084 - - PREDICTED: uncharacterized protein LOC105636025 isoform X1 [Jatropha curcas]
13 Hb_000466_060 0.1728989474 - - phosphofructokinase [Hevea brasiliensis]
14 Hb_000856_100 0.1738217508 - - PREDICTED: protein NUCLEAR FUSION DEFECTIVE 4 [Jatropha curcas]
15 Hb_001252_170 0.1766210294 desease resistance Gene Name: Exostosin hypothetical protein PRUPE_ppa001357mg [Prunus persica]
16 Hb_000565_020 0.1784021015 - - PREDICTED: alpha-galactosidase 3 [Jatropha curcas]
17 Hb_003540_140 0.1802331606 - - PREDICTED: choline transporter-like protein 2 [Jatropha curcas]
18 Hb_103351_010 0.1802645887 - - hypothetical protein POPTR_0002s01570g [Populus trichocarpa]
19 Hb_000441_230 0.1808376088 - - unnamed protein product [Coffea canephora]
20 Hb_001523_010 0.1809142376 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_25496 [Jatropha curcas]

Gene co-expression network

sample Hb_074961_010 Hb_074961_010 Hb_000117_010 Hb_000117_010 Hb_074961_010--Hb_000117_010 Hb_000117_020 Hb_000117_020 Hb_074961_010--Hb_000117_020 Hb_002253_110 Hb_002253_110 Hb_074961_010--Hb_002253_110 Hb_000033_060 Hb_000033_060 Hb_074961_010--Hb_000033_060 Hb_000878_040 Hb_000878_040 Hb_074961_010--Hb_000878_040 Hb_023327_030 Hb_023327_030 Hb_074961_010--Hb_023327_030 Hb_000117_010--Hb_000117_020 Hb_005271_150 Hb_005271_150 Hb_000117_010--Hb_005271_150 Hb_073339_010 Hb_073339_010 Hb_000117_010--Hb_073339_010 Hb_124587_010 Hb_124587_010 Hb_000117_010--Hb_124587_010 Hb_000117_010--Hb_023327_030 Hb_103351_010 Hb_103351_010 Hb_000117_020--Hb_103351_010 Hb_000117_020--Hb_002253_110 Hb_000117_020--Hb_124587_010 Hb_000707_070 Hb_000707_070 Hb_000117_020--Hb_000707_070 Hb_003360_020 Hb_003360_020 Hb_002253_110--Hb_003360_020 Hb_002769_040 Hb_002769_040 Hb_002253_110--Hb_002769_040 Hb_000856_100 Hb_000856_100 Hb_002253_110--Hb_000856_100 Hb_002253_110--Hb_000033_060 Hb_009193_130 Hb_009193_130 Hb_002253_110--Hb_009193_130 Hb_000033_060--Hb_009193_130 Hb_002627_060 Hb_002627_060 Hb_000033_060--Hb_002627_060 Hb_000033_060--Hb_000856_100 Hb_098315_100 Hb_098315_100 Hb_000033_060--Hb_098315_100 Hb_002506_110 Hb_002506_110 Hb_000033_060--Hb_002506_110 Hb_002475_050 Hb_002475_050 Hb_000878_040--Hb_002475_050 Hb_003216_110 Hb_003216_110 Hb_000878_040--Hb_003216_110 Hb_001268_210 Hb_001268_210 Hb_000878_040--Hb_001268_210 Hb_002837_070 Hb_002837_070 Hb_000878_040--Hb_002837_070 Hb_002986_050 Hb_002986_050 Hb_000878_040--Hb_002986_050 Hb_002739_080 Hb_002739_080 Hb_000878_040--Hb_002739_080 Hb_023327_030--Hb_002475_050 Hb_005000_270 Hb_005000_270 Hb_023327_030--Hb_005000_270 Hb_000256_270 Hb_000256_270 Hb_023327_030--Hb_000256_270 Hb_079326_010 Hb_079326_010 Hb_023327_030--Hb_079326_010 Hb_002918_070 Hb_002918_070 Hb_023327_030--Hb_002918_070 Hb_003716_020 Hb_003716_020 Hb_023327_030--Hb_003716_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
157.992 5.87062 3.48379 38.3177 88.219 265.237
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
50.499 17.765 51.4407 9.06591 3.17929

CAGE analysis