Hb_062317_010

Information

Type -
Description -
Location Contig62317: 3354-6384
Sequence    

Annotation

kegg
ID rcu:RCOM_0536920
description hypothetical protein
nr
ID XP_002521605.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9S6I6
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0536920 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_062317_010 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_022599_010 0.0558199144 - - Uncharacterized protein TCM_010507 [Theobroma cacao]
3 Hb_027522_020 0.0970610314 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
4 Hb_110426_010 0.1170260051 - - -
5 Hb_000723_150 0.1170352258 - - PREDICTED: high affinity nitrate transporter 2.4-like [Jatropha curcas]
6 Hb_002375_100 0.1171042352 - - PREDICTED: uncharacterized protein LOC104878944 [Vitis vinifera]
7 Hb_001172_110 0.11714121 - - hypothetical protein JCGZ_11284 [Jatropha curcas]
8 Hb_002874_220 0.1171608769 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g31250 [Jatropha curcas]
9 Hb_008562_020 0.1171925982 - - -
10 Hb_001307_230 0.1172392386 - - PREDICTED: interferon-related developmental regulator 1-like [Jatropha curcas]
11 Hb_026317_020 0.117321317 - - hypothetical protein VITISV_035911 [Vitis vinifera]
12 Hb_002342_010 0.1174076405 - - RALF-LIKE 27 family protein [Populus trichocarpa]
13 Hb_001782_090 0.1174440741 - - PREDICTED: pentatricopeptide repeat-containing protein At1g62910-like [Vitis vinifera]
14 Hb_000905_010 0.1174843445 - - PREDICTED: cytochrome P450 705A5-like [Jatropha curcas]
15 Hb_094256_010 0.1174879985 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
16 Hb_000777_010 0.1175081411 - - PREDICTED: uncharacterized protein LOC105766834 [Gossypium raimondii]
17 Hb_006599_040 0.1175532841 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
18 Hb_004145_030 0.1175592606 - - hypothetical protein PRUPE_ppa021229mg [Prunus persica]
19 Hb_174010_030 0.1175778334 - - PREDICTED: uncharacterized protein LOC105634770 [Jatropha curcas]
20 Hb_002396_010 0.1176104684 - - PREDICTED: uncharacterized protein LOC105767002 [Gossypium raimondii]

Gene co-expression network

sample Hb_062317_010 Hb_062317_010 Hb_022599_010 Hb_022599_010 Hb_062317_010--Hb_022599_010 Hb_027522_020 Hb_027522_020 Hb_062317_010--Hb_027522_020 Hb_110426_010 Hb_110426_010 Hb_062317_010--Hb_110426_010 Hb_000723_150 Hb_000723_150 Hb_062317_010--Hb_000723_150 Hb_002375_100 Hb_002375_100 Hb_062317_010--Hb_002375_100 Hb_001172_110 Hb_001172_110 Hb_062317_010--Hb_001172_110 Hb_022599_010--Hb_027522_020 Hb_005352_010 Hb_005352_010 Hb_022599_010--Hb_005352_010 Hb_004762_020 Hb_004762_020 Hb_022599_010--Hb_004762_020 Hb_005405_010 Hb_005405_010 Hb_022599_010--Hb_005405_010 Hb_002396_010 Hb_002396_010 Hb_022599_010--Hb_002396_010 Hb_027522_020--Hb_005352_010 Hb_003915_030 Hb_003915_030 Hb_027522_020--Hb_003915_030 Hb_006778_010 Hb_006778_010 Hb_027522_020--Hb_006778_010 Hb_001255_070 Hb_001255_070 Hb_027522_020--Hb_001255_070 Hb_110426_010--Hb_000723_150 Hb_110426_010--Hb_002375_100 Hb_110426_010--Hb_001172_110 Hb_001307_230 Hb_001307_230 Hb_110426_010--Hb_001307_230 Hb_026317_020 Hb_026317_020 Hb_110426_010--Hb_026317_020 Hb_002874_220 Hb_002874_220 Hb_110426_010--Hb_002874_220 Hb_000723_150--Hb_002375_100 Hb_000723_150--Hb_001172_110 Hb_000723_150--Hb_001307_230 Hb_000723_150--Hb_026317_020 Hb_000723_150--Hb_002874_220 Hb_002375_100--Hb_001172_110 Hb_002375_100--Hb_001307_230 Hb_002375_100--Hb_026317_020 Hb_001782_090 Hb_001782_090 Hb_002375_100--Hb_001782_090 Hb_001172_110--Hb_001307_230 Hb_001172_110--Hb_026317_020 Hb_001172_110--Hb_001782_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0 0 0.0292227
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.097145 0.951261

CAGE analysis