Hb_046825_010

Information

Type -
Description -
Location Contig46825: 1-777
Sequence    

Annotation

kegg
ID bvg:104886268
description uncharacterized LOC104886268
nr
ID XP_010521027.1
description PREDICTED: uncharacterized protein LOC104800023, partial [Tarenaya hassleriana]
swissprot
ID -
description -
trembl
ID A0A072UUB6
description Uncharacterized protein OS=Medicago truncatula GN=MTR_3g438210 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_046825_010 0.0 - - PREDICTED: uncharacterized protein LOC104800023, partial [Tarenaya hassleriana]
2 Hb_154064_010 0.0245528125 - - PREDICTED: uncharacterized protein LOC105780682 [Gossypium raimondii]
3 Hb_180094_010 0.0250488626 - - PREDICTED: uncharacterized protein LOC105628311 [Jatropha curcas]
4 Hb_127349_020 0.0252392143 - - PREDICTED: uncharacterized protein LOC105629655 [Jatropha curcas]
5 Hb_003528_100 0.0356167003 - - beta-1,3-glucuronyltransferase, putative [Ricinus communis]
6 Hb_065774_010 0.0509818815 - - PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP16-3, chloroplastic [Jatropha curcas]
7 Hb_000140_040 0.0514794752 - - PREDICTED: UDP-glycosyltransferase 79B6-like [Jatropha curcas]
8 Hb_000152_300 0.052305038 - - Aspartic proteinase Asp1 precursor, putative [Ricinus communis]
9 Hb_010666_020 0.0540951774 - - hypothetical protein JCGZ_04276 [Jatropha curcas]
10 Hb_000433_040 0.0615759451 - - -
11 Hb_081344_010 0.0635205696 - - PREDICTED: uncharacterized protein LOC105638675 [Jatropha curcas]
12 Hb_007317_030 0.0659953943 - - -
13 Hb_000160_120 0.0676686725 - - conserved hypothetical protein [Ricinus communis]
14 Hb_000268_050 0.0677660619 - - PREDICTED: tetrapyrrole-binding protein, chloroplastic [Jatropha curcas]
15 Hb_029879_020 0.0689675188 - - PREDICTED: cytochrome P450 77A1 [Jatropha curcas]
16 Hb_002301_070 0.0727390338 - - PREDICTED: triose phosphate/phosphate translocator TPT, chloroplastic isoform X1 [Jatropha curcas]
17 Hb_003787_030 0.0739779343 - - conserved hypothetical protein [Ricinus communis]
18 Hb_001437_170 0.0747642961 - - hypothetical protein POPTR_0009s01390g [Populus trichocarpa]
19 Hb_096907_010 0.0781403229 - - PREDICTED: uncharacterized protein LOC104800023, partial [Tarenaya hassleriana]
20 Hb_000363_070 0.0807321345 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_046825_010 Hb_046825_010 Hb_154064_010 Hb_154064_010 Hb_046825_010--Hb_154064_010 Hb_180094_010 Hb_180094_010 Hb_046825_010--Hb_180094_010 Hb_127349_020 Hb_127349_020 Hb_046825_010--Hb_127349_020 Hb_003528_100 Hb_003528_100 Hb_046825_010--Hb_003528_100 Hb_065774_010 Hb_065774_010 Hb_046825_010--Hb_065774_010 Hb_000140_040 Hb_000140_040 Hb_046825_010--Hb_000140_040 Hb_154064_010--Hb_127349_020 Hb_154064_010--Hb_180094_010 Hb_154064_010--Hb_003528_100 Hb_007317_030 Hb_007317_030 Hb_154064_010--Hb_007317_030 Hb_029879_020 Hb_029879_020 Hb_154064_010--Hb_029879_020 Hb_180094_010--Hb_127349_020 Hb_000152_300 Hb_000152_300 Hb_180094_010--Hb_000152_300 Hb_010666_020 Hb_010666_020 Hb_180094_010--Hb_010666_020 Hb_180094_010--Hb_000140_040 Hb_000433_040 Hb_000433_040 Hb_180094_010--Hb_000433_040 Hb_127349_020--Hb_000152_300 Hb_127349_020--Hb_010666_020 Hb_127349_020--Hb_000433_040 Hb_003528_100--Hb_065774_010 Hb_000160_120 Hb_000160_120 Hb_003528_100--Hb_000160_120 Hb_001437_170 Hb_001437_170 Hb_003528_100--Hb_001437_170 Hb_096907_010 Hb_096907_010 Hb_003528_100--Hb_096907_010 Hb_002391_340 Hb_002391_340 Hb_065774_010--Hb_002391_340 Hb_065774_010--Hb_007317_030 Hb_001232_070 Hb_001232_070 Hb_065774_010--Hb_001232_070 Hb_065774_010--Hb_001437_170 Hb_065774_010--Hb_000160_120 Hb_000140_040--Hb_127349_020 Hb_001097_110 Hb_001097_110 Hb_000140_040--Hb_001097_110 Hb_000140_040--Hb_000152_300 Hb_007534_080 Hb_007534_080 Hb_000140_040--Hb_007534_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.0397345 0.0503054 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0.170526

CAGE analysis