Hb_000433_040

Information

Type -
Description -
Location Contig433: 86497-92298
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000433_040 0.0 - - -
2 Hb_081344_010 0.0034302334 - - PREDICTED: uncharacterized protein LOC105638675 [Jatropha curcas]
3 Hb_000152_300 0.0103707115 - - Aspartic proteinase Asp1 precursor, putative [Ricinus communis]
4 Hb_010666_020 0.0109082349 - - hypothetical protein JCGZ_04276 [Jatropha curcas]
5 Hb_029584_020 0.0352012939 - - conserved hypothetical protein [Ricinus communis]
6 Hb_127349_020 0.0363812513 - - PREDICTED: uncharacterized protein LOC105629655 [Jatropha curcas]
7 Hb_180094_010 0.0391123964 - - PREDICTED: uncharacterized protein LOC105628311 [Jatropha curcas]
8 Hb_158597_010 0.039196538 - - PREDICTED: serine hydroxymethyltransferase, mitochondrial [Jatropha curcas]
9 Hb_000940_060 0.0458843326 - - hypothetical protein POPTR_0009s13250g [Populus trichocarpa]
10 Hb_003805_110 0.0536393103 - - PREDICTED: laccase-11-like [Jatropha curcas]
11 Hb_000140_040 0.0538440132 - - PREDICTED: UDP-glycosyltransferase 79B6-like [Jatropha curcas]
12 Hb_000530_060 0.0545794543 - - -
13 Hb_003093_050 0.0570032779 - - PREDICTED: uncharacterized protein LOC105641023 isoform X2 [Jatropha curcas]
14 Hb_004818_010 0.0588381111 - - hypothetical protein JCGZ_13628 [Jatropha curcas]
15 Hb_046825_010 0.0615759451 - - PREDICTED: uncharacterized protein LOC104800023, partial [Tarenaya hassleriana]
16 Hb_154064_010 0.0653922316 - - PREDICTED: uncharacterized protein LOC105780682 [Gossypium raimondii]
17 Hb_004143_080 0.0655204561 - - PREDICTED: protein ECERIFERUM 1 [Jatropha curcas]
18 Hb_000704_020 0.0671761309 - - conserved hypothetical protein [Ricinus communis]
19 Hb_000815_120 0.0716916237 - - calcium ion binding protein, putative [Ricinus communis]
20 Hb_001097_110 0.0729568786 - - gibberellin 20-oxidase, putative [Ricinus communis]

Gene co-expression network

sample Hb_000433_040 Hb_000433_040 Hb_081344_010 Hb_081344_010 Hb_000433_040--Hb_081344_010 Hb_000152_300 Hb_000152_300 Hb_000433_040--Hb_000152_300 Hb_010666_020 Hb_010666_020 Hb_000433_040--Hb_010666_020 Hb_029584_020 Hb_029584_020 Hb_000433_040--Hb_029584_020 Hb_127349_020 Hb_127349_020 Hb_000433_040--Hb_127349_020 Hb_180094_010 Hb_180094_010 Hb_000433_040--Hb_180094_010 Hb_081344_010--Hb_000152_300 Hb_081344_010--Hb_010666_020 Hb_081344_010--Hb_029584_020 Hb_081344_010--Hb_127349_020 Hb_158597_010 Hb_158597_010 Hb_081344_010--Hb_158597_010 Hb_000152_300--Hb_010666_020 Hb_000152_300--Hb_127349_020 Hb_000152_300--Hb_180094_010 Hb_000152_300--Hb_029584_020 Hb_010666_020--Hb_127349_020 Hb_010666_020--Hb_180094_010 Hb_010666_020--Hb_158597_010 Hb_000530_060 Hb_000530_060 Hb_029584_020--Hb_000530_060 Hb_003805_110 Hb_003805_110 Hb_029584_020--Hb_003805_110 Hb_029584_020--Hb_010666_020 Hb_127349_020--Hb_180094_010 Hb_046825_010 Hb_046825_010 Hb_127349_020--Hb_046825_010 Hb_154064_010 Hb_154064_010 Hb_127349_020--Hb_154064_010 Hb_180094_010--Hb_046825_010 Hb_000140_040 Hb_000140_040 Hb_180094_010--Hb_000140_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.0116526 0.0116718 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0.0583919

CAGE analysis