Hb_010666_020

Information

Type -
Description -
Location Contig10666: 17148-18579
Sequence    

Annotation

kegg
ID rcu:RCOM_1590900
description hypothetical protein
nr
ID KDP38351.1
description hypothetical protein JCGZ_04276 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KQ65
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04276 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_010666_020 0.0 - - hypothetical protein JCGZ_04276 [Jatropha curcas]
2 Hb_000433_040 0.0109082349 - - -
3 Hb_000152_300 0.0117362841 - - Aspartic proteinase Asp1 precursor, putative [Ricinus communis]
4 Hb_081344_010 0.0142613727 - - PREDICTED: uncharacterized protein LOC105638675 [Jatropha curcas]
5 Hb_127349_020 0.0292474579 - - PREDICTED: uncharacterized protein LOC105629655 [Jatropha curcas]
6 Hb_180094_010 0.0341764797 - - PREDICTED: uncharacterized protein LOC105628311 [Jatropha curcas]
7 Hb_158597_010 0.0405040921 - - PREDICTED: serine hydroxymethyltransferase, mitochondrial [Jatropha curcas]
8 Hb_000940_060 0.041539595 - - hypothetical protein POPTR_0009s13250g [Populus trichocarpa]
9 Hb_029584_020 0.0460049391 - - conserved hypothetical protein [Ricinus communis]
10 Hb_046825_010 0.0540951774 - - PREDICTED: uncharacterized protein LOC104800023, partial [Tarenaya hassleriana]
11 Hb_000140_040 0.0551898878 - - PREDICTED: UDP-glycosyltransferase 79B6-like [Jatropha curcas]
12 Hb_154064_010 0.0553427932 - - PREDICTED: uncharacterized protein LOC105780682 [Gossypium raimondii]
13 Hb_003805_110 0.0630883799 - - PREDICTED: laccase-11-like [Jatropha curcas]
14 Hb_003093_050 0.0640292971 - - PREDICTED: uncharacterized protein LOC105641023 isoform X2 [Jatropha curcas]
15 Hb_000530_060 0.0654207086 - - -
16 Hb_004818_010 0.0659976067 - - hypothetical protein JCGZ_13628 [Jatropha curcas]
17 Hb_004143_080 0.0685421866 - - PREDICTED: protein ECERIFERUM 1 [Jatropha curcas]
18 Hb_000704_020 0.0701004633 - - conserved hypothetical protein [Ricinus communis]
19 Hb_002301_070 0.0727424883 - - PREDICTED: triose phosphate/phosphate translocator TPT, chloroplastic isoform X1 [Jatropha curcas]
20 Hb_000815_120 0.0751800187 - - calcium ion binding protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_010666_020 Hb_010666_020 Hb_000433_040 Hb_000433_040 Hb_010666_020--Hb_000433_040 Hb_000152_300 Hb_000152_300 Hb_010666_020--Hb_000152_300 Hb_081344_010 Hb_081344_010 Hb_010666_020--Hb_081344_010 Hb_127349_020 Hb_127349_020 Hb_010666_020--Hb_127349_020 Hb_180094_010 Hb_180094_010 Hb_010666_020--Hb_180094_010 Hb_158597_010 Hb_158597_010 Hb_010666_020--Hb_158597_010 Hb_000433_040--Hb_081344_010 Hb_000433_040--Hb_000152_300 Hb_029584_020 Hb_029584_020 Hb_000433_040--Hb_029584_020 Hb_000433_040--Hb_127349_020 Hb_000433_040--Hb_180094_010 Hb_000152_300--Hb_081344_010 Hb_000152_300--Hb_127349_020 Hb_000152_300--Hb_180094_010 Hb_000152_300--Hb_029584_020 Hb_081344_010--Hb_029584_020 Hb_081344_010--Hb_127349_020 Hb_081344_010--Hb_158597_010 Hb_127349_020--Hb_180094_010 Hb_046825_010 Hb_046825_010 Hb_127349_020--Hb_046825_010 Hb_154064_010 Hb_154064_010 Hb_127349_020--Hb_154064_010 Hb_180094_010--Hb_046825_010 Hb_000140_040 Hb_000140_040 Hb_180094_010--Hb_000140_040 Hb_000940_060 Hb_000940_060 Hb_158597_010--Hb_000940_060 Hb_158597_010--Hb_000433_040 Hb_158597_010--Hb_000152_300 Hb_004818_010 Hb_004818_010 Hb_158597_010--Hb_004818_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.0155495 0.0152105 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0.0729022

CAGE analysis