Hb_009730_010

Information

Type -
Description -
Location Contig9730: 4987-6777
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_009730_010 0.0 - - -
2 Hb_002235_090 0.1060147221 - - UDP-glucuronosyltransferase, putative [Ricinus communis]
3 Hb_000261_270 0.1290148945 - - Xyloglucan endotransglucosylase/hydrolase protein 2 precursor, putative [Ricinus communis]
4 Hb_000858_040 0.2459515453 - - hypothetical protein PRUPE_ppa022673mg [Prunus persica]
5 Hb_001882_140 0.2606573083 - - -
6 Hb_030545_040 0.3225819625 - - -
7 Hb_047735_010 0.3403503152 - - DNA/RNA polymerases superfamily protein, putative [Theobroma cacao]
8 Hb_007809_070 0.3448894161 - - conserved hypothetical protein [Ricinus communis]
9 Hb_155103_010 0.3463303425 - - PREDICTED: uncharacterized protein LOC105636491 [Jatropha curcas]
10 Hb_003589_010 0.3469390933 - - -
11 Hb_008948_030 0.3473471617 - - hypothetical protein RCOM_0224470 [Ricinus communis]
12 Hb_003878_160 0.3481359634 - - conserved hypothetical protein [Ricinus communis]
13 Hb_022790_030 0.3483351965 - - PREDICTED: probable calcium-binding protein CML18 [Jatropha curcas]
14 Hb_181132_010 0.3512881096 - - -
15 Hb_000757_080 0.3521206625 - - vacuolar ATP synthase subunit G plant, putative [Ricinus communis]
16 Hb_100821_010 0.3551485149 - - hypothetical protein JCGZ_01613 [Jatropha curcas]
17 Hb_002928_080 0.3565998003 - - PREDICTED: pentatricopeptide repeat-containing protein At5g42310, mitochondrial [Jatropha curcas]
18 Hb_002392_060 0.356781032 - - gag/pol protein [Bryonia dioica]
19 Hb_001433_010 0.3656125241 - - -
20 Hb_020805_020 0.3667199253 - - -

Gene co-expression network

sample Hb_009730_010 Hb_009730_010 Hb_002235_090 Hb_002235_090 Hb_009730_010--Hb_002235_090 Hb_000261_270 Hb_000261_270 Hb_009730_010--Hb_000261_270 Hb_000858_040 Hb_000858_040 Hb_009730_010--Hb_000858_040 Hb_001882_140 Hb_001882_140 Hb_009730_010--Hb_001882_140 Hb_030545_040 Hb_030545_040 Hb_009730_010--Hb_030545_040 Hb_047735_010 Hb_047735_010 Hb_009730_010--Hb_047735_010 Hb_002235_090--Hb_001882_140 Hb_002235_090--Hb_000261_270 Hb_002235_090--Hb_000858_040 Hb_001005_180 Hb_001005_180 Hb_002235_090--Hb_001005_180 Hb_022790_030 Hb_022790_030 Hb_002235_090--Hb_022790_030 Hb_000261_270--Hb_000858_040 Hb_002450_160 Hb_002450_160 Hb_000261_270--Hb_002450_160 Hb_000261_270--Hb_001882_140 Hb_001146_090 Hb_001146_090 Hb_000261_270--Hb_001146_090 Hb_000858_040--Hb_002450_160 Hb_000858_040--Hb_001882_140 Hb_000858_040--Hb_001146_090 Hb_000022_210 Hb_000022_210 Hb_001882_140--Hb_000022_210 Hb_009398_010 Hb_009398_010 Hb_001882_140--Hb_009398_010 Hb_002289_030 Hb_002289_030 Hb_001882_140--Hb_002289_030 Hb_005316_010 Hb_005316_010 Hb_001882_140--Hb_005316_010 Hb_005204_060 Hb_005204_060 Hb_001882_140--Hb_005204_060 Hb_075351_010 Hb_075351_010 Hb_030545_040--Hb_075351_010 Hb_000521_310 Hb_000521_310 Hb_030545_040--Hb_000521_310 Hb_022593_030 Hb_022593_030 Hb_030545_040--Hb_022593_030 Hb_001673_110 Hb_001673_110 Hb_030545_040--Hb_001673_110 Hb_018616_030 Hb_018616_030 Hb_030545_040--Hb_018616_030 Hb_155103_010 Hb_155103_010 Hb_047735_010--Hb_155103_010 Hb_003589_010 Hb_003589_010 Hb_047735_010--Hb_003589_010 Hb_008948_030 Hb_008948_030 Hb_047735_010--Hb_008948_030 Hb_003878_160 Hb_003878_160 Hb_047735_010--Hb_003878_160 Hb_007809_070 Hb_007809_070 Hb_047735_010--Hb_007809_070 Hb_181132_010 Hb_181132_010 Hb_047735_010--Hb_181132_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.115985 0 0.0699065 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.142423 0

CAGE analysis