Hb_005316_010

Information

Type -
Description -
Location Contig5316: 9492-11366
Sequence    

Annotation

kegg
ID rcu:RCOM_1014860
description BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative (EC:2.7.10.1)
nr
ID XP_002522569.1
description BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
swissprot
ID O22808
description Protein LYK5 OS=Arabidopsis thaliana GN=LYK5 PE=2 SV=1
trembl
ID B9S9A0
description BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1, putative OS=Ricinus communis GN=RCOM_1014860 PE=4 SV=1
Gene Ontology
ID GO:0004672
description protein lyk5-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005316_010 0.0 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
2 Hb_002671_070 0.0252722537 - - hypothetical protein POPTR_0006s05220g, partial [Populus trichocarpa]
3 Hb_005946_130 0.0252722537 - - -
4 Hb_001048_120 0.0271089805 - - Rhicadhesin receptor precursor, putative [Ricinus communis]
5 Hb_070810_010 0.0308142434 - - hypothetical protein CICLE_v10033628mg, partial [Citrus clementina]
6 Hb_005625_030 0.0309832882 - - ribosomal protein S12 (mitochondrion) [Chrysobalanus icaco]
7 Hb_000705_320 0.0340371215 - - Transcriptional regulator SUPERMAN, putative [Ricinus communis]
8 Hb_000345_090 0.0367254793 - - Cell cycle checkpoint control protein family isoform 5 [Theobroma cacao]
9 Hb_027556_050 0.0372263952 - - hypothetical protein PHAVU_001G166100g [Phaseolus vulgaris]
10 Hb_080359_020 0.0373908925 - - hypothetical protein JCGZ_04985 [Jatropha curcas]
11 Hb_000724_010 0.0380946883 - - PREDICTED: uncharacterized protein LOC105134348 [Populus euphratica]
12 Hb_001031_100 0.0386101656 - - -
13 Hb_002596_100 0.0396627595 - - -
14 Hb_003687_050 0.0398008578 - - conserved hypothetical protein [Ricinus communis]
15 Hb_000441_240 0.0403446657 - - hypothetical protein ZEAMMB73_005804 [Zea mays]
16 Hb_001031_070 0.0405364075 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase CES101 [Jatropha curcas]
17 Hb_071079_030 0.040924128 transcription factor TF Family: MYB-related PREDICTED: transcription factor TRY-like [Populus euphratica]
18 Hb_000938_010 0.0421751269 - - polyprotein [Oryza australiensis]
19 Hb_159542_010 0.0446931871 desease resistance Gene Name: NB-ARC PREDICTED: TMV resistance protein N-like [Jatropha curcas]
20 Hb_000696_180 0.046141909 - - cysteine protease, putative [Ricinus communis]

Gene co-expression network

sample Hb_005316_010 Hb_005316_010 Hb_002671_070 Hb_002671_070 Hb_005316_010--Hb_002671_070 Hb_005946_130 Hb_005946_130 Hb_005316_010--Hb_005946_130 Hb_001048_120 Hb_001048_120 Hb_005316_010--Hb_001048_120 Hb_070810_010 Hb_070810_010 Hb_005316_010--Hb_070810_010 Hb_005625_030 Hb_005625_030 Hb_005316_010--Hb_005625_030 Hb_000705_320 Hb_000705_320 Hb_005316_010--Hb_000705_320 Hb_002671_070--Hb_005946_130 Hb_002671_070--Hb_001048_120 Hb_002671_070--Hb_070810_010 Hb_002671_070--Hb_005625_030 Hb_002671_070--Hb_000705_320 Hb_000345_090 Hb_000345_090 Hb_002671_070--Hb_000345_090 Hb_002671_070--Hb_005946_130 Hb_002671_070--Hb_001048_120 Hb_002671_070--Hb_070810_010 Hb_002671_070--Hb_005625_030 Hb_002671_070--Hb_000705_320 Hb_002671_070--Hb_000345_090 Hb_001048_120--Hb_005946_130 Hb_001048_120--Hb_070810_010 Hb_001048_120--Hb_005625_030 Hb_001048_120--Hb_000705_320 Hb_001048_120--Hb_000345_090 Hb_070810_010--Hb_005625_030 Hb_070810_010--Hb_000705_320 Hb_070810_010--Hb_005946_130 Hb_070810_010--Hb_000345_090 Hb_005625_030--Hb_000705_320 Hb_005625_030--Hb_005946_130 Hb_005625_030--Hb_000345_090 Hb_000705_320--Hb_000345_090 Hb_027556_050 Hb_027556_050 Hb_000705_320--Hb_027556_050 Hb_080359_020 Hb_080359_020 Hb_000705_320--Hb_080359_020 Hb_000724_010 Hb_000724_010 Hb_000705_320--Hb_000724_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.0349099 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0407731 0

CAGE analysis