Hb_008686_040

Information

Type -
Description -
Location Contig8686: 43948-50695
Sequence    

Annotation

kegg
ID rcu:RCOM_1387790
description electron transporter, putative
nr
ID XP_012070004.1
description PREDICTED: uncharacterized protein LOC105632278 isoform X3 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KUR6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03413 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_61070: 43682-45706 , PASA_asmbl_61071: 45729-49997
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_008686_040 0.0 - - PREDICTED: uncharacterized protein LOC105632278 isoform X3 [Jatropha curcas]
2 Hb_000258_400 0.0864020912 transcription factor TF Family: bHLH transcription regulator, putative [Ricinus communis]
3 Hb_072952_010 0.0924224655 - - PREDICTED: GDSL esterase/lipase At5g18430-like [Populus euphratica]
4 Hb_072620_010 0.0995040752 - - PREDICTED: receptor-like protein kinase 2 [Cucumis melo]
5 Hb_007760_060 0.1009161905 transcription factor TF Family: MYB hypothetical protein POPTR_0010s17470g [Populus trichocarpa]
6 Hb_000073_040 0.102011427 - - hypothetical protein POPTR_0003s21020g, partial [Populus trichocarpa]
7 Hb_000375_100 0.1050419021 - - RecName: Full=Valine N-monooxygenase 1; AltName: Full=Cytochrome P450 79D1 [Manihot esculenta]
8 Hb_000071_060 0.1059743053 - - conserved hypothetical protein [Ricinus communis]
9 Hb_007576_090 0.1063209923 - - lipid transfer protein precursor [Gossypium herbaceum subsp. africanum]
10 Hb_000127_240 0.1090651247 - - SAUR39 [Populus tomentosa]
11 Hb_000010_430 0.1093621046 - - Esterase precursor, putative [Ricinus communis]
12 Hb_180535_010 0.1096334704 - - -
13 Hb_000375_220 0.1122882328 - - RecName: Full=2-methylbutanal oxime monooxygenase; AltName: Full=Cytochrome P450 71E7 [Manihot esculenta]
14 Hb_061336_010 0.1132430269 - - conserved hypothetical protein [Ricinus communis]
15 Hb_006614_020 0.1152336366 - - PREDICTED: probable 2-oxoglutarate/Fe(II)-dependent dioxygenase [Jatropha curcas]
16 Hb_002045_160 0.1154341813 - - PREDICTED: DJ-1 protein homolog E-like [Jatropha curcas]
17 Hb_000816_180 0.1155484381 - - PREDICTED: uncharacterized protein LOC105780682 [Gossypium raimondii]
18 Hb_002030_010 0.1210054099 - - hypothetical protein JCGZ_18681 [Jatropha curcas]
19 Hb_003006_070 0.1216337117 - - aquaporin [Manihot esculenta]
20 Hb_000397_060 0.1232253575 - - PREDICTED: uncharacterized protein LOC105641237 [Jatropha curcas]

Gene co-expression network

sample Hb_008686_040 Hb_008686_040 Hb_000258_400 Hb_000258_400 Hb_008686_040--Hb_000258_400 Hb_072952_010 Hb_072952_010 Hb_008686_040--Hb_072952_010 Hb_072620_010 Hb_072620_010 Hb_008686_040--Hb_072620_010 Hb_007760_060 Hb_007760_060 Hb_008686_040--Hb_007760_060 Hb_000073_040 Hb_000073_040 Hb_008686_040--Hb_000073_040 Hb_000375_100 Hb_000375_100 Hb_008686_040--Hb_000375_100 Hb_000258_400--Hb_072952_010 Hb_180535_010 Hb_180535_010 Hb_000258_400--Hb_180535_010 Hb_000816_180 Hb_000816_180 Hb_000258_400--Hb_000816_180 Hb_000258_400--Hb_000073_040 Hb_007576_090 Hb_007576_090 Hb_000258_400--Hb_007576_090 Hb_061336_010 Hb_061336_010 Hb_000258_400--Hb_061336_010 Hb_072952_010--Hb_061336_010 Hb_072952_010--Hb_007576_090 Hb_072952_010--Hb_000375_100 Hb_072952_010--Hb_180535_010 Hb_072952_010--Hb_000816_180 Hb_072620_010--Hb_000073_040 Hb_072620_010--Hb_000258_400 Hb_072620_010--Hb_072952_010 Hb_001257_070 Hb_001257_070 Hb_072620_010--Hb_001257_070 Hb_000671_020 Hb_000671_020 Hb_072620_010--Hb_000671_020 Hb_002045_160 Hb_002045_160 Hb_072620_010--Hb_002045_160 Hb_000127_240 Hb_000127_240 Hb_007760_060--Hb_000127_240 Hb_007760_060--Hb_000375_100 Hb_007760_060--Hb_007576_090 Hb_000010_430 Hb_000010_430 Hb_007760_060--Hb_000010_430 Hb_007760_060--Hb_180535_010 Hb_007760_060--Hb_072952_010 Hb_001958_040 Hb_001958_040 Hb_000073_040--Hb_001958_040 Hb_000397_060 Hb_000397_060 Hb_000073_040--Hb_000397_060 Hb_000073_040--Hb_072952_010 Hb_000073_040--Hb_002045_160 Hb_000375_100--Hb_000010_430 Hb_000375_100--Hb_007576_090 Hb_000375_100--Hb_061336_010 Hb_028486_020 Hb_028486_020 Hb_000375_100--Hb_028486_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 3.56263 1.99712 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0178664 0.0677506 0.0426505 0.717289

CAGE analysis