Hb_007741_020

Information

Type -
Description -
Location Contig7741: 24115-25626
Sequence    

Annotation

kegg
ID pxb:103964550
description uncharacterized LOC103964550
nr
ID XP_012083614.1
description PREDICTED: uncharacterized protein LOC105643152 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID B9IBX1
description Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0014s06200g PE=4 SV=2
Gene Ontology
ID GO:0043229
description PREDICTED: uncharacterized protein LOC105643152

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007741_020 0.0 - - PREDICTED: uncharacterized protein LOC105643152 [Jatropha curcas]
2 Hb_000567_050 0.0813016083 - - PREDICTED: UBP1-associated protein 2C [Jatropha curcas]
3 Hb_000077_090 0.0865728094 - - conserved hypothetical protein [Ricinus communis]
4 Hb_000212_240 0.0878159331 - - short-chain dehydrogenase, putative [Ricinus communis]
5 Hb_002054_040 0.0895020146 - - PREDICTED: putative clathrin assembly protein At5g35200 [Jatropha curcas]
6 Hb_002374_050 0.0907732454 - - PREDICTED: auxilin-related protein 1 [Jatropha curcas]
7 Hb_002784_060 0.0938187346 transcription factor TF Family: bZIP PREDICTED: transcription factor TGA6 isoform X1 [Jatropha curcas]
8 Hb_000600_070 0.0967542808 - - PREDICTED: leucine aminopeptidase 1-like [Jatropha curcas]
9 Hb_000023_190 0.0973305199 - - PREDICTED: eukaryotic translation initiation factor 3 subunit B-like [Jatropha curcas]
10 Hb_000031_220 0.0981749944 - - PREDICTED: UDP-glycosyltransferase 73B4-like [Jatropha curcas]
11 Hb_000364_080 0.0985113835 - - PREDICTED: OTU domain-containing protein 3 isoform X1 [Jatropha curcas]
12 Hb_002027_270 0.0992317748 - - PREDICTED: serine/threonine-protein phosphatase BSL1 [Jatropha curcas]
13 Hb_015763_030 0.0997509411 - - conserved hypothetical protein [Ricinus communis]
14 Hb_002942_160 0.1001453959 - - PREDICTED: coiled-coil domain-containing protein SCD2 [Jatropha curcas]
15 Hb_000316_030 0.1022912403 - - zinc finger protein, putative [Ricinus communis]
16 Hb_000329_090 0.1023623641 - - arginase, putative [Ricinus communis]
17 Hb_187739_020 0.1031751074 - - PREDICTED: B2 protein [Jatropha curcas]
18 Hb_100215_010 0.1034153169 - - PREDICTED: heterogeneous nuclear ribonucleoprotein R isoform X1 [Jatropha curcas]
19 Hb_002163_030 0.1038379664 - - PREDICTED: serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' gamma isoform [Jatropha curcas]
20 Hb_010180_040 0.1048402878 - - PREDICTED: prosaposin isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_007741_020 Hb_007741_020 Hb_000567_050 Hb_000567_050 Hb_007741_020--Hb_000567_050 Hb_000077_090 Hb_000077_090 Hb_007741_020--Hb_000077_090 Hb_000212_240 Hb_000212_240 Hb_007741_020--Hb_000212_240 Hb_002054_040 Hb_002054_040 Hb_007741_020--Hb_002054_040 Hb_002374_050 Hb_002374_050 Hb_007741_020--Hb_002374_050 Hb_002784_060 Hb_002784_060 Hb_007741_020--Hb_002784_060 Hb_003428_070 Hb_003428_070 Hb_000567_050--Hb_003428_070 Hb_000023_190 Hb_000023_190 Hb_000567_050--Hb_000023_190 Hb_000743_040 Hb_000743_040 Hb_000567_050--Hb_000743_040 Hb_000600_070 Hb_000600_070 Hb_000567_050--Hb_000600_070 Hb_002044_060 Hb_002044_060 Hb_000567_050--Hb_002044_060 Hb_010381_060 Hb_010381_060 Hb_000567_050--Hb_010381_060 Hb_000510_200 Hb_000510_200 Hb_000077_090--Hb_000510_200 Hb_001863_110 Hb_001863_110 Hb_000077_090--Hb_001863_110 Hb_000316_030 Hb_000316_030 Hb_000077_090--Hb_000316_030 Hb_000436_040 Hb_000436_040 Hb_000077_090--Hb_000436_040 Hb_003363_010 Hb_003363_010 Hb_000077_090--Hb_003363_010 Hb_004881_020 Hb_004881_020 Hb_000212_240--Hb_004881_020 Hb_006252_040 Hb_006252_040 Hb_000212_240--Hb_006252_040 Hb_002716_130 Hb_002716_130 Hb_000212_240--Hb_002716_130 Hb_000025_110 Hb_000025_110 Hb_000212_240--Hb_000025_110 Hb_004117_130 Hb_004117_130 Hb_000212_240--Hb_004117_130 Hb_000606_090 Hb_000606_090 Hb_000212_240--Hb_000606_090 Hb_000166_110 Hb_000166_110 Hb_002054_040--Hb_000166_110 Hb_000031_220 Hb_000031_220 Hb_002054_040--Hb_000031_220 Hb_000260_220 Hb_000260_220 Hb_002054_040--Hb_000260_220 Hb_002054_040--Hb_002374_050 Hb_000134_090 Hb_000134_090 Hb_002054_040--Hb_000134_090 Hb_002982_040 Hb_002982_040 Hb_002054_040--Hb_002982_040 Hb_006114_030 Hb_006114_030 Hb_002374_050--Hb_006114_030 Hb_002374_050--Hb_000260_220 Hb_004689_050 Hb_004689_050 Hb_002374_050--Hb_004689_050 Hb_001124_160 Hb_001124_160 Hb_002374_050--Hb_001124_160 Hb_100215_010 Hb_100215_010 Hb_002374_050--Hb_100215_010 Hb_002784_060--Hb_000567_050 Hb_002027_270 Hb_002027_270 Hb_002784_060--Hb_002027_270 Hb_002784_060--Hb_006114_030 Hb_012490_030 Hb_012490_030 Hb_002784_060--Hb_012490_030 Hb_002784_060--Hb_000031_220 Hb_002784_060--Hb_000212_240
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
18.8171 10.4869 4.33231 12.4915 14.4481 27.4439
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
17.0192 5.59926 8.37271 8.11314 9.62901

CAGE analysis