Hb_007044_050

Information

Type -
Description -
Location Contig7044: 20929-23145
Sequence    

Annotation

kegg
ID tcc:TCM_019610
description Glycosyl hydrolase family 81 protein
nr
ID XP_012088145.1
description PREDICTED: putative endo-1,3(4)-beta-glucanase 2 [Jatropha curcas]
swissprot
ID Q09850
description Putative endo-1,3(4)-beta-glucanase 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=eng2 PE=3 SV=1
trembl
ID A0A067JKF3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25658 PE=4 SV=1
Gene Ontology
ID GO:0052861
description endo- -beta-glucanase 2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007044_050 0.0 - - PREDICTED: putative endo-1,3(4)-beta-glucanase 2 [Jatropha curcas]
2 Hb_010344_050 0.0797862553 - - Adagio 1 -like protein [Gossypium arboreum]
3 Hb_004993_060 0.0927888805 - - -
4 Hb_001352_020 0.0931353453 - - PREDICTED: ATP-dependent zinc metalloprotease FTSH 8, mitochondrial-like [Jatropha curcas]
5 Hb_000505_150 0.0933931608 - - PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like [Jatropha curcas]
6 Hb_001898_080 0.0934435396 - - PREDICTED: MACPF domain-containing protein At4g24290 isoform X2 [Jatropha curcas]
7 Hb_007386_040 0.0947919072 - - PREDICTED: acyl-coenzyme A thioesterase 9, mitochondrial-like [Jatropha curcas]
8 Hb_001789_150 0.0964468623 - - PREDICTED: mitogen-activated protein kinase kinase kinase YODA-like isoform X1 [Jatropha curcas]
9 Hb_003847_030 0.0967167925 - - PREDICTED: pentatricopeptide repeat-containing protein At5g15010, mitochondrial [Jatropha curcas]
10 Hb_005305_050 0.0994510616 - - PREDICTED: armadillo repeat-containing protein 8 [Jatropha curcas]
11 Hb_000497_300 0.1008516811 - - peroxisomal membrane protein [Hevea brasiliensis]
12 Hb_000109_180 0.1048202458 - - PREDICTED: AP-1 complex subunit gamma-2-like [Jatropha curcas]
13 Hb_001242_130 0.1055499967 - - PREDICTED: U3 small nucleolar RNA-associated protein 4-like [Jatropha curcas]
14 Hb_003376_250 0.1061164481 - - Transducin/WD40 repeat-like superfamily protein [Theobroma cacao]
15 Hb_004480_100 0.107610606 - - PREDICTED: calcium homeostasis endoplasmic reticulum protein [Jatropha curcas]
16 Hb_000012_310 0.1081409449 - - PREDICTED: serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like isoform X2 [Jatropha curcas]
17 Hb_000406_130 0.1096259602 - - vesicle-associated membrane protein, putative [Ricinus communis]
18 Hb_000479_140 0.1114476432 - - TPA: hypothetical protein ZEAMMB73_881803, partial [Zea mays]
19 Hb_000471_110 0.1124189919 - - PREDICTED: pentatricopeptide repeat-containing protein At5g39980, chloroplastic [Jatropha curcas]
20 Hb_000152_320 0.1124497479 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_007044_050 Hb_007044_050 Hb_010344_050 Hb_010344_050 Hb_007044_050--Hb_010344_050 Hb_004993_060 Hb_004993_060 Hb_007044_050--Hb_004993_060 Hb_001352_020 Hb_001352_020 Hb_007044_050--Hb_001352_020 Hb_000505_150 Hb_000505_150 Hb_007044_050--Hb_000505_150 Hb_001898_080 Hb_001898_080 Hb_007044_050--Hb_001898_080 Hb_007386_040 Hb_007386_040 Hb_007044_050--Hb_007386_040 Hb_000497_300 Hb_000497_300 Hb_010344_050--Hb_000497_300 Hb_004712_130 Hb_004712_130 Hb_010344_050--Hb_004712_130 Hb_010344_050--Hb_001352_020 Hb_010344_050--Hb_007386_040 Hb_010344_050--Hb_000505_150 Hb_031910_020 Hb_031910_020 Hb_004993_060--Hb_031910_020 Hb_000549_040 Hb_000549_040 Hb_004993_060--Hb_000549_040 Hb_000603_080 Hb_000603_080 Hb_004993_060--Hb_000603_080 Hb_023771_010 Hb_023771_010 Hb_004993_060--Hb_023771_010 Hb_000152_320 Hb_000152_320 Hb_004993_060--Hb_000152_320 Hb_000116_260 Hb_000116_260 Hb_001352_020--Hb_000116_260 Hb_001352_020--Hb_000497_300 Hb_000406_130 Hb_000406_130 Hb_001352_020--Hb_000406_130 Hb_001789_150 Hb_001789_150 Hb_001352_020--Hb_001789_150 Hb_000471_110 Hb_000471_110 Hb_001352_020--Hb_000471_110 Hb_000252_100 Hb_000252_100 Hb_000505_150--Hb_000252_100 Hb_000140_380 Hb_000140_380 Hb_000505_150--Hb_000140_380 Hb_000505_150--Hb_007386_040 Hb_000853_200 Hb_000853_200 Hb_000505_150--Hb_000853_200 Hb_000505_150--Hb_001898_080 Hb_007416_090 Hb_007416_090 Hb_001898_080--Hb_007416_090 Hb_001898_080--Hb_001789_150 Hb_000406_140 Hb_000406_140 Hb_001898_080--Hb_000406_140 Hb_003847_030 Hb_003847_030 Hb_001898_080--Hb_003847_030 Hb_000787_020 Hb_000787_020 Hb_001898_080--Hb_000787_020 Hb_007386_040--Hb_000252_100 Hb_000012_310 Hb_000012_310 Hb_007386_040--Hb_000012_310 Hb_000454_090 Hb_000454_090 Hb_007386_040--Hb_000454_090 Hb_000109_180 Hb_000109_180 Hb_007386_040--Hb_000109_180
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
12.4259 27.0196 11.0687 35.4002 8.63967 17.247
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
19.3985 25.7092 48.0668 40.3713 33.123

CAGE analysis