Hb_004324_020

Information

Type -
Description -
Location Contig4324: 12066-13202
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004324_020 0.0 - - -
2 Hb_004048_140 0.1885101633 - - -
3 Hb_000012_180 0.2394049276 - - conserved hypothetical protein [Ricinus communis]
4 Hb_116195_010 0.2399780767 - - -
5 Hb_080083_010 0.2434544619 - - -
6 Hb_000525_040 0.2499679292 - - -
7 Hb_017417_010 0.2518794874 - - -
8 Hb_000088_030 0.2568433583 - - hypothetical protein JCGZ_10947 [Jatropha curcas]
9 Hb_019936_010 0.2579079233 - - PREDICTED: 26S proteasome non-ATPase regulatory subunit 10 [Jatropha curcas]
10 Hb_001195_590 0.2598055401 - - PREDICTED: uncharacterized protein LOC105633753 [Jatropha curcas]
11 Hb_000109_150 0.2630043971 - - conserved hypothetical protein [Ricinus communis]
12 Hb_002903_120 0.2686316344 - - -
13 Hb_007017_060 0.274203279 - - PREDICTED: 5-formyltetrahydrofolate cyclo-ligase, mitochondrial-like [Jatropha curcas]
14 Hb_173902_040 0.2761268243 - - -
15 Hb_008507_050 0.2805653445 - - PREDICTED: S-adenosylmethionine decarboxylase proenzyme-like [Jatropha curcas]
16 Hb_003813_200 0.2810396868 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
17 Hb_010368_070 0.283409919 - - conserved hypothetical protein [Ricinus communis]
18 Hb_000088_060 0.2838956762 - - -
19 Hb_001473_190 0.2854392818 - - 50S ribosomal protein L20 [Hevea brasiliensis]
20 Hb_000525_060 0.2856929409 - - PREDICTED: uncharacterized protein LOC104211307 [Nicotiana sylvestris]

Gene co-expression network

sample Hb_004324_020 Hb_004324_020 Hb_004048_140 Hb_004048_140 Hb_004324_020--Hb_004048_140 Hb_000012_180 Hb_000012_180 Hb_004324_020--Hb_000012_180 Hb_116195_010 Hb_116195_010 Hb_004324_020--Hb_116195_010 Hb_080083_010 Hb_080083_010 Hb_004324_020--Hb_080083_010 Hb_000525_040 Hb_000525_040 Hb_004324_020--Hb_000525_040 Hb_017417_010 Hb_017417_010 Hb_004324_020--Hb_017417_010 Hb_007017_060 Hb_007017_060 Hb_004048_140--Hb_007017_060 Hb_004048_140--Hb_017417_010 Hb_009801_010 Hb_009801_010 Hb_004048_140--Hb_009801_010 Hb_001473_190 Hb_001473_190 Hb_004048_140--Hb_001473_190 Hb_107847_010 Hb_107847_010 Hb_004048_140--Hb_107847_010 Hb_001565_100 Hb_001565_100 Hb_000012_180--Hb_001565_100 Hb_073973_170 Hb_073973_170 Hb_000012_180--Hb_073973_170 Hb_074683_020 Hb_074683_020 Hb_000012_180--Hb_074683_020 Hb_003813_200 Hb_003813_200 Hb_000012_180--Hb_003813_200 Hb_000038_130 Hb_000038_130 Hb_000012_180--Hb_000038_130 Hb_000307_170 Hb_000307_170 Hb_000012_180--Hb_000307_170 Hb_142392_010 Hb_142392_010 Hb_116195_010--Hb_142392_010 Hb_008507_050 Hb_008507_050 Hb_116195_010--Hb_008507_050 Hb_010680_010 Hb_010680_010 Hb_116195_010--Hb_010680_010 Hb_008078_030 Hb_008078_030 Hb_116195_010--Hb_008078_030 Hb_020730_010 Hb_020730_010 Hb_116195_010--Hb_020730_010 Hb_005057_010 Hb_005057_010 Hb_080083_010--Hb_005057_010 Hb_000140_150 Hb_000140_150 Hb_080083_010--Hb_000140_150 Hb_080083_010--Hb_000525_040 Hb_027556_010 Hb_027556_010 Hb_080083_010--Hb_027556_010 Hb_000088_060 Hb_000088_060 Hb_080083_010--Hb_000088_060 Hb_080083_010--Hb_017417_010 Hb_010368_070 Hb_010368_070 Hb_000525_040--Hb_010368_070 Hb_002903_120 Hb_002903_120 Hb_000525_040--Hb_002903_120 Hb_004032_460 Hb_004032_460 Hb_000525_040--Hb_004032_460 Hb_019936_010 Hb_019936_010 Hb_000525_040--Hb_019936_010 Hb_007634_020 Hb_007634_020 Hb_000525_040--Hb_007634_020 Hb_011616_030 Hb_011616_030 Hb_000525_040--Hb_011616_030 Hb_000668_010 Hb_000668_010 Hb_017417_010--Hb_000668_010 Hb_000922_150 Hb_000922_150 Hb_017417_010--Hb_000922_150 Hb_000183_070 Hb_000183_070 Hb_017417_010--Hb_000183_070 Hb_017417_010--Hb_019936_010 Hb_005714_040 Hb_005714_040 Hb_017417_010--Hb_005714_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.36992 0.0335311 0.0903124 0 0.388313 0.0556292
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0918621 0.14441 0 0 0

CAGE analysis