Hb_011616_030

Information

Type -
Description -
Location Contig11616: 23830-30510
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_011616_030 0.0 - - -
2 Hb_032264_130 0.1248684749 - - hypothetical protein JCGZ_02516 [Jatropha curcas]
3 Hb_170116_010 0.1294345737 - - Geranyl diphosphate synthase 1 isoform 2 [Theobroma cacao]
4 Hb_000523_020 0.1408448574 - - PREDICTED: uncharacterized protein LOC105650610 [Jatropha curcas]
5 Hb_019936_010 0.1441109645 - - PREDICTED: 26S proteasome non-ATPase regulatory subunit 10 [Jatropha curcas]
6 Hb_002388_060 0.1445904091 - - conserved hypothetical protein [Ricinus communis]
7 Hb_095397_010 0.1532408155 - - hypothetical protein 25 [Hevea brasiliensis]
8 Hb_000525_040 0.1554242442 - - -
9 Hb_053262_010 0.158470257 - - -
10 Hb_001454_390 0.16110098 - - 8-kd dynein light chain, DLC8, pin [Thalassiosira pseudonana CCMP1335]
11 Hb_004092_010 0.1670133844 - - transferase, transferring glycosyl groups, putative [Ricinus communis]
12 Hb_017111_010 0.17086264 - - PREDICTED: inositol transporter 4 [Jatropha curcas]
13 Hb_043637_010 0.1766845387 transcription factor TF Family: zf-HD hypothetical protein POPTR_0015s05220g, partial [Populus trichocarpa]
14 Hb_000270_400 0.1792030701 - - lipase, putative [Ricinus communis]
15 Hb_010368_070 0.1804843226 - - conserved hypothetical protein [Ricinus communis]
16 Hb_000376_150 0.1813768816 - - O-acyltransferase WSD1 [Gossypium arboreum]
17 Hb_003304_080 0.1820507954 transcription factor TF Family: bHLH lMYC3 [Hevea brasiliensis]
18 Hb_007634_020 0.1830408466 - - -
19 Hb_007545_210 0.185073903 transcription factor TF Family: C2C2-Dof PREDICTED: cyclic dof factor 3-like [Jatropha curcas]
20 Hb_001780_060 0.194586601 - - PREDICTED: uncharacterized protein LOC105631129 [Jatropha curcas]

Gene co-expression network

sample Hb_011616_030 Hb_011616_030 Hb_032264_130 Hb_032264_130 Hb_011616_030--Hb_032264_130 Hb_170116_010 Hb_170116_010 Hb_011616_030--Hb_170116_010 Hb_000523_020 Hb_000523_020 Hb_011616_030--Hb_000523_020 Hb_019936_010 Hb_019936_010 Hb_011616_030--Hb_019936_010 Hb_002388_060 Hb_002388_060 Hb_011616_030--Hb_002388_060 Hb_095397_010 Hb_095397_010 Hb_011616_030--Hb_095397_010 Hb_032264_130--Hb_002388_060 Hb_053262_010 Hb_053262_010 Hb_032264_130--Hb_053262_010 Hb_032264_130--Hb_019936_010 Hb_007545_210 Hb_007545_210 Hb_032264_130--Hb_007545_210 Hb_032264_130--Hb_170116_010 Hb_043637_010 Hb_043637_010 Hb_170116_010--Hb_043637_010 Hb_000352_150 Hb_000352_150 Hb_170116_010--Hb_000352_150 Hb_170116_010--Hb_000523_020 Hb_001454_390 Hb_001454_390 Hb_170116_010--Hb_001454_390 Hb_002875_090 Hb_002875_090 Hb_170116_010--Hb_002875_090 Hb_001635_220 Hb_001635_220 Hb_170116_010--Hb_001635_220 Hb_000270_400 Hb_000270_400 Hb_000523_020--Hb_000270_400 Hb_126669_010 Hb_126669_010 Hb_000523_020--Hb_126669_010 Hb_000523_020--Hb_007545_210 Hb_000523_020--Hb_002388_060 Hb_002627_060 Hb_002627_060 Hb_000523_020--Hb_002627_060 Hb_000668_010 Hb_000668_010 Hb_019936_010--Hb_000668_010 Hb_000525_040 Hb_000525_040 Hb_019936_010--Hb_000525_040 Hb_010368_070 Hb_010368_070 Hb_019936_010--Hb_010368_070 Hb_019936_010--Hb_001454_390 Hb_002388_060--Hb_007545_210 Hb_000416_100 Hb_000416_100 Hb_002388_060--Hb_000416_100 Hb_002388_060--Hb_000270_400 Hb_002388_060--Hb_001454_390 Hb_007810_040 Hb_007810_040 Hb_095397_010--Hb_007810_040 Hb_003906_120 Hb_003906_120 Hb_095397_010--Hb_003906_120 Hb_003304_080 Hb_003304_080 Hb_095397_010--Hb_003304_080 Hb_002232_180 Hb_002232_180 Hb_095397_010--Hb_002232_180 Hb_000050_120 Hb_000050_120 Hb_095397_010--Hb_000050_120 Hb_095397_010--Hb_043637_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
44.4711 0.584291 0.0267108 0.294337 26.7153 11.6717
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
7.82914 5.64185 5.14453 1.51334 0.380126

CAGE analysis