Hb_003581_090

Information

Type -
Description -
Location Contig3581: 66305-68675
Sequence    

Annotation

kegg
ID pop:POPTR_0010s04310g
description glyoxal oxidase-related family protein
nr
ID XP_012091952.1
description PREDICTED: galactose oxidase [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JBU3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21703 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003581_090 0.0 - - PREDICTED: galactose oxidase [Jatropha curcas]
2 Hb_092706_020 0.089141796 - - PREDICTED: uncharacterized protein LOC105637876 isoform X1 [Jatropha curcas]
3 Hb_002291_030 0.0993737992 - - PREDICTED: vesicle transport protein SFT2B [Jatropha curcas]
4 Hb_002759_230 0.1005910056 - - PREDICTED: vacuolar protein sorting-associated protein 25 [Jatropha curcas]
5 Hb_002529_100 0.102358499 - - PREDICTED: DET1- and DDB1-associated protein 1 isoform X1 [Jatropha curcas]
6 Hb_000926_290 0.10249326 - - conserved hypothetical protein [Ricinus communis]
7 Hb_001722_040 0.1043311772 - - PREDICTED: ubiquitin-conjugating enzyme E2 variant 1A-like [Jatropha curcas]
8 Hb_000062_580 0.1043364171 - - ATP binding protein, putative [Ricinus communis]
9 Hb_001711_030 0.1095312327 - - PREDICTED: uncharacterized protein LOC105642409 [Jatropha curcas]
10 Hb_000412_110 0.1095675795 - - Rop4 [Hevea brasiliensis]
11 Hb_000521_150 0.1097710084 - - PREDICTED: uncharacterized protein LOC105650332 [Jatropha curcas]
12 Hb_012522_030 0.1111986261 - - ankyrin repeat-containing protein, putative [Ricinus communis]
13 Hb_183963_020 0.1119412936 - - PREDICTED: uncharacterized protein LOC105644615 [Jatropha curcas]
14 Hb_000051_040 0.11251868 - - PREDICTED: uncharacterized protein LOC102597788 [Solanum tuberosum]
15 Hb_001341_130 0.1135059391 - - conserved hypothetical protein [Ricinus communis]
16 Hb_008695_190 0.1142750797 transcription factor TF Family: ARF PREDICTED: auxin response factor 17 [Jatropha curcas]
17 Hb_007021_020 0.1156770542 transcription factor TF Family: B3 PREDICTED: B3 domain-containing transcription factor VRN1 isoform X1 [Jatropha curcas]
18 Hb_000188_130 0.1163159547 - - PREDICTED: uncharacterized protein LOC102628744 [Citrus sinensis]
19 Hb_003038_180 0.1167093004 - - PREDICTED: uncharacterized protein LOC105649131 [Jatropha curcas]
20 Hb_000487_310 0.1172492986 - - PREDICTED: uncharacterized protein LOC105646211 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_003581_090 Hb_003581_090 Hb_092706_020 Hb_092706_020 Hb_003581_090--Hb_092706_020 Hb_002291_030 Hb_002291_030 Hb_003581_090--Hb_002291_030 Hb_002759_230 Hb_002759_230 Hb_003581_090--Hb_002759_230 Hb_002529_100 Hb_002529_100 Hb_003581_090--Hb_002529_100 Hb_000926_290 Hb_000926_290 Hb_003581_090--Hb_000926_290 Hb_001722_040 Hb_001722_040 Hb_003581_090--Hb_001722_040 Hb_092706_020--Hb_002291_030 Hb_002928_110 Hb_002928_110 Hb_092706_020--Hb_002928_110 Hb_000521_150 Hb_000521_150 Hb_092706_020--Hb_000521_150 Hb_000085_200 Hb_000085_200 Hb_092706_020--Hb_000085_200 Hb_092706_020--Hb_000926_290 Hb_002291_030--Hb_002928_110 Hb_012522_030 Hb_012522_030 Hb_002291_030--Hb_012522_030 Hb_002326_030 Hb_002326_030 Hb_002291_030--Hb_002326_030 Hb_001478_050 Hb_001478_050 Hb_002291_030--Hb_001478_050 Hb_002387_060 Hb_002387_060 Hb_002291_030--Hb_002387_060 Hb_000188_130 Hb_000188_130 Hb_002759_230--Hb_000188_130 Hb_000212_260 Hb_000212_260 Hb_002759_230--Hb_000212_260 Hb_002909_060 Hb_002909_060 Hb_002759_230--Hb_002909_060 Hb_000099_060 Hb_000099_060 Hb_002759_230--Hb_000099_060 Hb_001912_010 Hb_001912_010 Hb_002759_230--Hb_001912_010 Hb_001257_080 Hb_001257_080 Hb_002529_100--Hb_001257_080 Hb_001951_110 Hb_001951_110 Hb_002529_100--Hb_001951_110 Hb_000798_030 Hb_000798_030 Hb_002529_100--Hb_000798_030 Hb_000023_230 Hb_000023_230 Hb_002529_100--Hb_000023_230 Hb_000045_190 Hb_000045_190 Hb_002529_100--Hb_000045_190 Hb_000056_340 Hb_000056_340 Hb_002529_100--Hb_000056_340 Hb_003226_150 Hb_003226_150 Hb_000926_290--Hb_003226_150 Hb_000926_290--Hb_002529_100 Hb_000008_320 Hb_000008_320 Hb_000926_290--Hb_000008_320 Hb_008695_190 Hb_008695_190 Hb_000926_290--Hb_008695_190 Hb_000926_290--Hb_000521_150 Hb_183963_020 Hb_183963_020 Hb_001722_040--Hb_183963_020 Hb_025087_010 Hb_025087_010 Hb_001722_040--Hb_025087_010 Hb_001999_120 Hb_001999_120 Hb_001722_040--Hb_001999_120 Hb_001366_230 Hb_001366_230 Hb_001722_040--Hb_001366_230 Hb_002447_030 Hb_002447_030 Hb_001722_040--Hb_002447_030 Hb_003038_180 Hb_003038_180 Hb_001722_040--Hb_003038_180
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.826866 0.114036 0.10258 0.0547151 0.338886 0.339037
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.954314 0.930876 0.672029 0.0961435 0.0623171

CAGE analysis