Hb_000099_060

Information

Type -
Description -
Location Contig99: 74576-76364
Sequence    

Annotation

kegg
ID rcu:RCOM_1689770
description catalytic, putative
nr
ID KDP25727.1
description hypothetical protein JCGZ_23948 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JPF2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23948 PE=4 SV=1
Gene Ontology
ID GO:0016829
description lactoylglutathione lyase family protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_64717: 74584-75296 , PASA_asmbl_64719: 77259-78487
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000099_060 0.0 - - hypothetical protein JCGZ_23948 [Jatropha curcas]
2 Hb_000134_330 0.0680824967 - - PREDICTED: U6 snRNA-associated Sm-like protein LSm7 [Elaeis guineensis]
3 Hb_002182_060 0.0682803795 transcription factor TF Family: PHD PREDICTED: histone-lysine N-methyltransferase ATXR6 [Jatropha curcas]
4 Hb_008173_090 0.0696188455 - - glutathione peroxidase, putative [Ricinus communis]
5 Hb_155764_020 0.0707466521 - - hypothetical protein B456_009G265500 [Gossypium raimondii]
6 Hb_000970_010 0.0756971322 - - PREDICTED: 60S ribosomal protein L26-1 [Jatropha curcas]
7 Hb_001269_270 0.0776761677 - - 60S ribosomal protein L27B [Hevea brasiliensis]
8 Hb_000212_260 0.0786226168 - - acyl-carrier-protein [Triadica sebifera]
9 Hb_003125_150 0.080068663 - - PREDICTED: protein transport protein Sec61 subunit gamma [Jatropha curcas]
10 Hb_003376_030 0.0808290034 - - PREDICTED: ribonuclease P protein subunit p29 isoform X2 [Jatropha curcas]
11 Hb_001248_080 0.0825047657 - - PREDICTED: 40S ribosomal protein S29 [Nelumbo nucifera]
12 Hb_007479_020 0.082711076 - - PREDICTED: CMP-sialic acid transporter 5 [Jatropha curcas]
13 Hb_001045_080 0.0831379427 - - PREDICTED: uncharacterized protein LOC105646704 [Jatropha curcas]
14 Hb_007741_050 0.0832974654 - - vesicle-associated membrane protein, putative [Ricinus communis]
15 Hb_009787_040 0.0843703254 desease resistance Gene Name: AAA_17 PREDICTED: uncharacterized protein LOC105135462 isoform X2 [Populus euphratica]
16 Hb_003656_070 0.0859826226 - - hypothetical protein CICLE_v10009411mg [Citrus clementina]
17 Hb_000563_240 0.0860205183 - - PREDICTED: 60S ribosomal protein L19-3 [Jatropha curcas]
18 Hb_001268_140 0.0861994663 - - conserved hypothetical protein [Ricinus communis]
19 Hb_002918_200 0.0865227727 - - -
20 Hb_003455_040 0.0866098381 - - hypothetical protein JCGZ_17270 [Jatropha curcas]

Gene co-expression network

sample Hb_000099_060 Hb_000099_060 Hb_000134_330 Hb_000134_330 Hb_000099_060--Hb_000134_330 Hb_002182_060 Hb_002182_060 Hb_000099_060--Hb_002182_060 Hb_008173_090 Hb_008173_090 Hb_000099_060--Hb_008173_090 Hb_155764_020 Hb_155764_020 Hb_000099_060--Hb_155764_020 Hb_000970_010 Hb_000970_010 Hb_000099_060--Hb_000970_010 Hb_001269_270 Hb_001269_270 Hb_000099_060--Hb_001269_270 Hb_001268_140 Hb_001268_140 Hb_000134_330--Hb_001268_140 Hb_000025_600 Hb_000025_600 Hb_000134_330--Hb_000025_600 Hb_002296_060 Hb_002296_060 Hb_000134_330--Hb_002296_060 Hb_001300_270 Hb_001300_270 Hb_000134_330--Hb_001300_270 Hb_000134_330--Hb_008173_090 Hb_002182_060--Hb_008173_090 Hb_002182_060--Hb_000970_010 Hb_000200_100 Hb_000200_100 Hb_002182_060--Hb_000200_100 Hb_003106_050 Hb_003106_050 Hb_002182_060--Hb_003106_050 Hb_002301_140 Hb_002301_140 Hb_002182_060--Hb_002301_140 Hb_001235_190 Hb_001235_190 Hb_008173_090--Hb_001235_190 Hb_003656_070 Hb_003656_070 Hb_008173_090--Hb_003656_070 Hb_008173_090--Hb_000200_100 Hb_000574_480 Hb_000574_480 Hb_008173_090--Hb_000574_480 Hb_008173_090--Hb_000970_010 Hb_000563_240 Hb_000563_240 Hb_155764_020--Hb_000563_240 Hb_001248_080 Hb_001248_080 Hb_155764_020--Hb_001248_080 Hb_155764_020--Hb_001268_140 Hb_155764_020--Hb_000134_330 Hb_155764_020--Hb_001300_270 Hb_001818_020 Hb_001818_020 Hb_000970_010--Hb_001818_020 Hb_023732_070 Hb_023732_070 Hb_000970_010--Hb_023732_070 Hb_002518_050 Hb_002518_050 Hb_000970_010--Hb_002518_050 Hb_001584_070 Hb_001584_070 Hb_000970_010--Hb_001584_070 Hb_000545_150 Hb_000545_150 Hb_000970_010--Hb_000545_150 Hb_003125_150 Hb_003125_150 Hb_001269_270--Hb_003125_150 Hb_001638_260 Hb_001638_260 Hb_001269_270--Hb_001638_260 Hb_000617_090 Hb_000617_090 Hb_001269_270--Hb_000617_090 Hb_001045_080 Hb_001045_080 Hb_001269_270--Hb_001045_080 Hb_000526_150 Hb_000526_150 Hb_001269_270--Hb_000526_150 Hb_009851_100 Hb_009851_100 Hb_001269_270--Hb_009851_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
9.21253 2.8055 2.78662 3.67724 5.61692 6.71133
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
13.1564 22.3792 12.1026 3.58097 1.80439

CAGE analysis