Hb_002995_060

Information

Type -
Description -
Location Contig2995: 87503-88096
Sequence    

Annotation

kegg
ID rcu:RCOM_1064650
description cytochrome P450, putative (EC:1.14.14.1)
nr
ID XP_012071985.1
description PREDICTED: alkane hydroxylase MAH1-like [Jatropha curcas]
swissprot
ID Q9FVS9
description Alkane hydroxylase MAH1 OS=Arabidopsis thaliana GN=CYP96A15 PE=2 SV=1
trembl
ID A0A067LGD1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10248 PE=3 SV=1
Gene Ontology
ID GO:0004497
description alkane hydroxylase mah1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002995_060 0.0 - - PREDICTED: alkane hydroxylase MAH1-like [Jatropha curcas]
2 Hb_000029_390 0.0599403536 transcription factor TF Family: mTERF conserved hypothetical protein [Ricinus communis]
3 Hb_004920_080 0.0620593328 - - PREDICTED: calvin cycle protein CP12-2, chloroplastic-like [Jatropha curcas]
4 Hb_000629_110 0.0719361796 - - PREDICTED: protein RTF2 homolog [Jatropha curcas]
5 Hb_011381_120 0.0729815205 - - PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 2-like [Jatropha curcas]
6 Hb_004712_230 0.0733662037 - - PREDICTED: retrotransposon-like protein 1 [Jatropha curcas]
7 Hb_001671_130 0.0758657339 - - PREDICTED: protein NUCLEAR FUSION DEFECTIVE 4-like [Jatropha curcas]
8 Hb_009093_020 0.0808474608 - - PREDICTED: uncharacterized protein LOC105642100 [Jatropha curcas]
9 Hb_020805_090 0.0835029478 - - glyceraldehyde 3-phosphate dehydrogenase, putative [Ricinus communis]
10 Hb_004631_020 0.0861712636 - - PREDICTED: protein TRANSPARENT TESTA 12-like [Jatropha curcas]
11 Hb_000282_100 0.0869167192 - - PREDICTED: glycine dehydrogenase (decarboxylating), mitochondrial [Jatropha curcas]
12 Hb_005736_030 0.0873005011 - - thioredoxin m(mitochondrial)-type, putative [Ricinus communis]
13 Hb_000841_040 0.0940441856 transcription factor TF Family: C2C2-CO-like transcription factor, putative [Ricinus communis]
14 Hb_001289_050 0.0941795645 - - hypothetical protein Poptr_cp075 [Populus trichocarpa]
15 Hb_002818_130 0.0942132496 - - cytochrome P450, putative [Ricinus communis]
16 Hb_000349_150 0.0963721218 - - PREDICTED: geraniol 8-hydroxylase-like [Jatropha curcas]
17 Hb_003653_030 0.0968114936 - - nucleic acid binding protein, putative [Ricinus communis]
18 Hb_011689_070 0.0984445119 - - PREDICTED: pyruvate, phosphate dikinase, chloroplastic [Jatropha curcas]
19 Hb_004855_030 0.0985999581 - - PREDICTED: putative receptor-like protein kinase At3g47110 [Jatropha curcas]
20 Hb_003090_050 0.0989155378 - - fructose-1,6-bisphosphatase, putative [Ricinus communis]

Gene co-expression network

sample Hb_002995_060 Hb_002995_060 Hb_000029_390 Hb_000029_390 Hb_002995_060--Hb_000029_390 Hb_004920_080 Hb_004920_080 Hb_002995_060--Hb_004920_080 Hb_000629_110 Hb_000629_110 Hb_002995_060--Hb_000629_110 Hb_011381_120 Hb_011381_120 Hb_002995_060--Hb_011381_120 Hb_004712_230 Hb_004712_230 Hb_002995_060--Hb_004712_230 Hb_001671_130 Hb_001671_130 Hb_002995_060--Hb_001671_130 Hb_000029_390--Hb_004920_080 Hb_000282_100 Hb_000282_100 Hb_000029_390--Hb_000282_100 Hb_009093_020 Hb_009093_020 Hb_000029_390--Hb_009093_020 Hb_001517_060 Hb_001517_060 Hb_000029_390--Hb_001517_060 Hb_004631_020 Hb_004631_020 Hb_000029_390--Hb_004631_020 Hb_004920_080--Hb_000629_110 Hb_010021_040 Hb_010021_040 Hb_004920_080--Hb_010021_040 Hb_004920_080--Hb_004712_230 Hb_005736_030 Hb_005736_030 Hb_004920_080--Hb_005736_030 Hb_003093_050 Hb_003093_050 Hb_000629_110--Hb_003093_050 Hb_004818_010 Hb_004818_010 Hb_000629_110--Hb_004818_010 Hb_004143_080 Hb_004143_080 Hb_000629_110--Hb_004143_080 Hb_000704_020 Hb_000704_020 Hb_000629_110--Hb_000704_020 Hb_000983_200 Hb_000983_200 Hb_000629_110--Hb_000983_200 Hb_000629_110--Hb_005736_030 Hb_011381_120--Hb_009093_020 Hb_002818_130 Hb_002818_130 Hb_011381_120--Hb_002818_130 Hb_000841_040 Hb_000841_040 Hb_011381_120--Hb_000841_040 Hb_000111_460 Hb_000111_460 Hb_011381_120--Hb_000111_460 Hb_001310_020 Hb_001310_020 Hb_011381_120--Hb_001310_020 Hb_003090_050 Hb_003090_050 Hb_011381_120--Hb_003090_050 Hb_004712_230--Hb_004631_020 Hb_004712_230--Hb_005736_030 Hb_004712_230--Hb_011381_120 Hb_004712_230--Hb_002818_130 Hb_003653_030 Hb_003653_030 Hb_004712_230--Hb_003653_030 Hb_028227_050 Hb_028227_050 Hb_001671_130--Hb_028227_050 Hb_009663_030 Hb_009663_030 Hb_001671_130--Hb_009663_030 Hb_001287_070 Hb_001287_070 Hb_001671_130--Hb_001287_070 Hb_019064_010 Hb_019064_010 Hb_001671_130--Hb_019064_010 Hb_001832_180 Hb_001832_180 Hb_001671_130--Hb_001832_180
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.172998 1.1729 0.534686 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 6.06993

CAGE analysis