Hb_001999_220

Information

Type -
Description -
Location Contig1999: 214019-215554
Sequence    

Annotation

kegg
ID rcu:RCOM_0611520
description cytochrome P450, putative (EC:1.14.14.1)
nr
ID XP_012067915.1
description PREDICTED: cytochrome P450 86A1 [Jatropha curcas]
swissprot
ID P48422
description Cytochrome P450 86A1 OS=Arabidopsis thaliana GN=CYP86A1 PE=1 SV=2
trembl
ID A0A067LDN5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08494 PE=3 SV=1
Gene Ontology
ID GO:0005773
description cytochrome p450 86a1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001999_220 0.0 - - PREDICTED: cytochrome P450 86A1 [Jatropha curcas]
2 Hb_001410_090 0.0831350644 - - transferase, putative [Ricinus communis]
3 Hb_001080_310 0.0839130785 - - PREDICTED: ent-copalyl diphosphate synthase, chloroplastic [Jatropha curcas]
4 Hb_000859_040 0.0855860542 - - Early nodulin 16 precursor, putative [Ricinus communis]
5 Hb_001047_250 0.0874845425 - - PREDICTED: ent-copalyl diphosphate synthase, chloroplastic [Jatropha curcas]
6 Hb_002281_070 0.0898008817 - - hypothetical protein JCGZ_04352 [Jatropha curcas]
7 Hb_001114_300 0.0898851585 - - hypothetical protein JCGZ_24970 [Jatropha curcas]
8 Hb_000160_230 0.0914677873 transcription factor TF Family: MYB PREDICTED: transcription factor MYB3-like [Jatropha curcas]
9 Hb_007810_140 0.091615734 - - Ankyrin repeat-containing protein [Medicago truncatula]
10 Hb_002758_040 0.0951795152 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
11 Hb_005511_050 0.1006172833 - - hypothetical protein POPTR_0008s04130g [Populus trichocarpa]
12 Hb_001141_170 0.1020482682 - - PREDICTED: non-specific lipid-transfer protein-like protein At2g13820 [Jatropha curcas]
13 Hb_010712_020 0.103734636 - - PREDICTED: caffeic acid 3-O-methyltransferase-like [Jatropha curcas]
14 Hb_006196_020 0.1054219144 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 100-like [Populus euphratica]
15 Hb_012019_030 0.1061221678 - - hypothetical protein POPTR_0005s23360g [Populus trichocarpa]
16 Hb_000329_410 0.1069314932 - - Beta-expansin 3 precursor, putative [Ricinus communis]
17 Hb_000905_140 0.1075948015 - - PREDICTED: protein gamma response 1 isoform X2 [Jatropha curcas]
18 Hb_008367_020 0.1125346703 - - PREDICTED: proline-rich receptor-like protein kinase PERK1 [Gossypium raimondii]
19 Hb_173102_010 0.1125955383 - - Ent-kaurene synthase B, chloroplast precursor, putative [Ricinus communis]
20 Hb_012652_020 0.1128776435 - - PREDICTED: probable carboxylesterase 18 [Jatropha curcas]

Gene co-expression network

sample Hb_001999_220 Hb_001999_220 Hb_001410_090 Hb_001410_090 Hb_001999_220--Hb_001410_090 Hb_001080_310 Hb_001080_310 Hb_001999_220--Hb_001080_310 Hb_000859_040 Hb_000859_040 Hb_001999_220--Hb_000859_040 Hb_001047_250 Hb_001047_250 Hb_001999_220--Hb_001047_250 Hb_002281_070 Hb_002281_070 Hb_001999_220--Hb_002281_070 Hb_001114_300 Hb_001114_300 Hb_001999_220--Hb_001114_300 Hb_001410_090--Hb_000859_040 Hb_005747_040 Hb_005747_040 Hb_001410_090--Hb_005747_040 Hb_106528_010 Hb_106528_010 Hb_001410_090--Hb_106528_010 Hb_002551_010 Hb_002551_010 Hb_001410_090--Hb_002551_010 Hb_001114_290 Hb_001114_290 Hb_001410_090--Hb_001114_290 Hb_001410_090--Hb_001114_300 Hb_001080_310--Hb_002281_070 Hb_002234_150 Hb_002234_150 Hb_001080_310--Hb_002234_150 Hb_012019_030 Hb_012019_030 Hb_001080_310--Hb_012019_030 Hb_001141_170 Hb_001141_170 Hb_001080_310--Hb_001141_170 Hb_001080_310--Hb_001047_250 Hb_007810_140 Hb_007810_140 Hb_000859_040--Hb_007810_140 Hb_000160_230 Hb_000160_230 Hb_000859_040--Hb_000160_230 Hb_000859_040--Hb_001114_300 Hb_002615_050 Hb_002615_050 Hb_000859_040--Hb_002615_050 Hb_006196_020 Hb_006196_020 Hb_000859_040--Hb_006196_020 Hb_010712_020 Hb_010712_020 Hb_001047_250--Hb_010712_020 Hb_001047_250--Hb_001141_170 Hb_146023_010 Hb_146023_010 Hb_001047_250--Hb_146023_010 Hb_002311_050 Hb_002311_050 Hb_001047_250--Hb_002311_050 Hb_000905_140 Hb_000905_140 Hb_002281_070--Hb_000905_140 Hb_000329_410 Hb_000329_410 Hb_002281_070--Hb_000329_410 Hb_002281_070--Hb_001114_300 Hb_002281_070--Hb_001141_170 Hb_008367_020 Hb_008367_020 Hb_002281_070--Hb_008367_020 Hb_001114_300--Hb_000905_140 Hb_001114_300--Hb_000329_410 Hb_001114_300--Hb_001141_170 Hb_169426_010 Hb_169426_010 Hb_001114_300--Hb_169426_010 Hb_005780_010 Hb_005780_010 Hb_001114_300--Hb_005780_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0165847 1.99419 0.0700316 0.103354 0.0383587 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0303894 0.0478168 0.0449594 11.6772 0

CAGE analysis